Mock Version: 5.9 Mock Version: 5.9 Mock Version: 5.9 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target aarch64 --nodeps /builddir/build/SPECS/python-bluepyopt.spec'], chrootPath='/var/lib/mock/f42-build-56217872-6541701/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'ff5b3743b7a34f2abefa7b381039768d', '-D', '/var/lib/mock/f42-build-56217872-6541701/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target aarch64 --nodeps /builddir/build/SPECS/python-bluepyopt.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721347200 Wrote: /builddir/build/SRPMS/python-bluepyopt-1.14.11-3.fc42.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noclean --target aarch64 --nodeps /builddir/build/SPECS/python-bluepyopt.spec'], chrootPath='/var/lib/mock/f42-build-56217872-6541701/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueraiseExc=FalseprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'baa0e2025be14af895cfbd379c115213', '-D', '/var/lib/mock/f42-build-56217872-6541701/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noclean --target aarch64 --nodeps /builddir/build/SPECS/python-bluepyopt.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.BINUzN + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + test -d /builddir/build/BUILD/python-bluepyopt-1.14.11-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-bluepyopt-1.14.11-build + /usr/bin/rm -rf /builddir/build/BUILD/python-bluepyopt-1.14.11-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.11-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.11-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.xxaDfW + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + rm -rf BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/467.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + cp -v /builddir/build/SOURCES/_version.py bluepyopt/_version.py '/builddir/build/SOURCES/_version.py' -> 'bluepyopt/_version.py' + sed -i '/scoop/ d' setup.py + sed -i 's/^\(.*:.*\)jupyter$/\1/' Makefile + sed -i 's/python l5pc_validate_neuron_arbor_pm.py/python3 l5pc_validate_neuron_arbor_pm.py/g' Makefile + rm -f bluepyopt/tests/test_neuroml_fcts.py + find examples/ -name .gitignore -delete + find examples/ -name dummy.inc -delete + find examples/ -type f -name '*.py' -exec sed -i 's|^#![ ]*/usr/bin/env.*$|#!/usr/bin/python3/|' '{}' ';' + find examples/ -type f -name '*.py' -exec chmod -x '{}' ';' + find examples/ -type f -name '*.mod' -exec sed -i 's/\r$//' '{}' ';' + find examples/ -type f -name '*.asc' -exec sed -i 's/\r$//' '{}' ';' + find examples/ -type f -name '*.csv' -exec sed -i 's/\r$//' '{}' ';' ++ grep '^MODSUBDIR' /usr/bin/nrnivmodl ++ cut -d = -f2 + export MODSUBDIR=aarch64 + MODSUBDIR=aarch64 + sed -i s/x86_64/aarch64/ Makefile + sed -i s/x86_64/aarch64/ bluepyopt/tests/test_l5pc.py + sed -i s/x86_64/aarch64/ bluepyopt/tests/test_stochkv.py + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.078G83 + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + cd BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/pyproject-wheeldir --output /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-bluepyopt-1.14.11-3.fc42.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target aarch64 --nodeps /builddir/build/SPECS/python-bluepyopt.spec'], chrootPath='/var/lib/mock/f42-build-56217872-6541701/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueraiseExc=FalseprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '43d125142def47aebf8cf514e48a10d6', '-D', '/var/lib/mock/f42-build-56217872-6541701/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target aarch64 --nodeps /builddir/build/SPECS/python-bluepyopt.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.FPS1Ev + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + cd BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/pyproject-wheeldir --output /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/versioneer.py:432: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY["git"] = ''' Warning: 'keywords' should be a list, got type 'tuple' running egg_info creating bluepyopt.egg-info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt writing manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/versioneer.py:432: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY["git"] = ''' Warning: 'keywords' should be a list, got type 'tuple' running dist_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt-1.14.10.dist-info' Handling numpy >=1.6 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: numpy >=1.6 (installed: numpy 2.2.1) Handling pandas >=0.18 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: pandas >=0.18 Handling deap >=1.3.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: deap >=1.3.3 Handling efel >=2.13 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: efel >=2.13 Handling ipyparallel from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: ipyparallel Handling pickleshare >=0.7.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: pickleshare >=0.7.3 Handling Jinja2 >=2.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Jinja2 >=2.8 (installed: Jinja2 3.1.5) Handling Pebble >=4.6.0 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: Pebble >=4.6.0 Handling NEURON >=7.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: NEURON >=7.8 (installed: NEURON 8.2.2) Handling pyneuroml >=0.5.20 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'all' Handling libNeuroML >=0.3.1 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'all' Handling LFPy >=2.3 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'all' Handling arbor >=0.7 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'all' Handling arbor >=0.7 ; extra == 'arbor' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'arbor' Handling LFPy >=2.3 ; extra == 'lfpy' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'lfpy' Handling pyneuroml >=0.5.20 ; extra == 'neuroml' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'neuroml' Handling libNeuroML >=0.3.1 ; extra == 'neuroml' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'neuroml' Handling pyneuroml >=0.5.20 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'tests' Handling libNeuroML >=0.3.1 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'tests' Handling LFPy >=2.3 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'tests' Handling arbor >=0.7 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'tests' + cat /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-buildrequires + rm -rfv bluepyopt-1.14.10.dist-info/ removed 'bluepyopt-1.14.10.dist-info/entry_points.txt' removed 'bluepyopt-1.14.10.dist-info/top_level.txt' removed 'bluepyopt-1.14.10.dist-info/METADATA' removed 'bluepyopt-1.14.10.dist-info/LICENSE.txt' removed 'bluepyopt-1.14.10.dist-info/COPYING' removed 'bluepyopt-1.14.10.dist-info/COPYING.lesser' removed 'bluepyopt-1.14.10.dist-info/AUTHORS.txt' removed directory 'bluepyopt-1.14.10.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-bluepyopt-1.14.11-3.fc42.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target aarch64 --nodeps /builddir/build/SPECS/python-bluepyopt.spec'], chrootPath='/var/lib/mock/f42-build-56217872-6541701/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueraiseExc=FalseprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '42be893cf40545c9a2dd9e541d6c93d4', '-D', '/var/lib/mock/f42-build-56217872-6541701/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target aarch64 --nodeps /builddir/build/SPECS/python-bluepyopt.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Aulnrp + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + cd BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/pyproject-wheeldir --output /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/versioneer.py:432: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY["git"] = ''' Warning: 'keywords' should be a list, got type 'tuple' running egg_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/versioneer.py:432: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY["git"] = ''' Warning: 'keywords' should be a list, got type 'tuple' running dist_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt-1.14.10.dist-info' Handling numpy >=1.6 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: numpy >=1.6 (installed: numpy 2.2.1) Handling pandas >=0.18 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: pandas >=0.18 (installed: pandas 2.2.3) Handling deap >=1.3.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: deap >=1.3.3 (installed: deap 1.4.1) Handling efel >=2.13 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: efel >=2.13 (installed: efel 5.4.0) Handling ipyparallel from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: ipyparallel (installed: ipyparallel 9.0.0) Handling pickleshare >=0.7.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: pickleshare >=0.7.3 (installed: pickleshare 0.7.5) Handling Jinja2 >=2.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Jinja2 >=2.8 (installed: Jinja2 3.1.5) Handling Pebble >=4.6.0 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Pebble >=4.6.0 (installed: Pebble 5.1.0) Handling NEURON >=7.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: NEURON >=7.8 (installed: NEURON 8.2.2) Handling pyneuroml >=0.5.20 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'all' Handling libNeuroML >=0.3.1 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'all' Handling LFPy >=2.3 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'all' Handling arbor >=0.7 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'all' Handling arbor >=0.7 ; extra == 'arbor' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'arbor' Handling LFPy >=2.3 ; extra == 'lfpy' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'lfpy' Handling pyneuroml >=0.5.20 ; extra == 'neuroml' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'neuroml' Handling libNeuroML >=0.3.1 ; extra == 'neuroml' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'neuroml' Handling pyneuroml >=0.5.20 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'tests' Handling libNeuroML >=0.3.1 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'tests' Handling LFPy >=2.3 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'tests' Handling arbor >=0.7 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'tests' + cat /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-buildrequires + rm -rfv bluepyopt-1.14.10.dist-info/ removed 'bluepyopt-1.14.10.dist-info/entry_points.txt' removed 'bluepyopt-1.14.10.dist-info/top_level.txt' removed 'bluepyopt-1.14.10.dist-info/METADATA' removed 'bluepyopt-1.14.10.dist-info/LICENSE.txt' removed 'bluepyopt-1.14.10.dist-info/COPYING' removed 'bluepyopt-1.14.10.dist-info/COPYING.lesser' removed 'bluepyopt-1.14.10.dist-info/AUTHORS.txt' removed directory 'bluepyopt-1.14.10.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-bluepyopt-1.14.11-3.fc42.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --noclean --target aarch64 /builddir/build/SPECS/python-bluepyopt.spec'], chrootPath='/var/lib/mock/f42-build-56217872-6541701/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'e4a4708b693d4a1ea2904e6e427fdf46', '-D', '/var/lib/mock/f42-build-56217872-6541701/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --noclean --target aarch64 /builddir/build/SPECS/python-bluepyopt.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.CnQCLt + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + cd BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/pyproject-wheeldir --output /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/versioneer.py:432: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY["git"] = ''' Warning: 'keywords' should be a list, got type 'tuple' running egg_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/versioneer.py:432: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY["git"] = ''' Warning: 'keywords' should be a list, got type 'tuple' running dist_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt-1.14.10.dist-info' Handling numpy >=1.6 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: numpy >=1.6 (installed: numpy 2.2.1) Handling pandas >=0.18 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: pandas >=0.18 (installed: pandas 2.2.3) Handling deap >=1.3.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: deap >=1.3.3 (installed: deap 1.4.1) Handling efel >=2.13 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: efel >=2.13 (installed: efel 5.4.0) Handling ipyparallel from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: ipyparallel (installed: ipyparallel 9.0.0) Handling pickleshare >=0.7.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: pickleshare >=0.7.3 (installed: pickleshare 0.7.5) Handling Jinja2 >=2.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Jinja2 >=2.8 (installed: Jinja2 3.1.5) Handling Pebble >=4.6.0 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Pebble >=4.6.0 (installed: Pebble 5.1.0) Handling NEURON >=7.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: NEURON >=7.8 (installed: NEURON 8.2.2) Handling pyneuroml >=0.5.20 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'all' Handling libNeuroML >=0.3.1 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'all' Handling LFPy >=2.3 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'all' Handling arbor >=0.7 ; extra == 'all' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'all' Handling arbor >=0.7 ; extra == 'arbor' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'arbor' Handling LFPy >=2.3 ; extra == 'lfpy' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'lfpy' Handling pyneuroml >=0.5.20 ; extra == 'neuroml' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'neuroml' Handling libNeuroML >=0.3.1 ; extra == 'neuroml' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'neuroml' Handling pyneuroml >=0.5.20 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml >=0.5.20 ; extra == 'tests' Handling libNeuroML >=0.3.1 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML >=0.3.1 ; extra == 'tests' Handling LFPy >=2.3 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy >=2.3 ; extra == 'tests' Handling arbor >=0.7 ; extra == 'tests' from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor >=0.7 ; extra == 'tests' + cat /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-buildrequires + rm -rfv bluepyopt-1.14.10.dist-info/ removed 'bluepyopt-1.14.10.dist-info/entry_points.txt' removed 'bluepyopt-1.14.10.dist-info/top_level.txt' removed 'bluepyopt-1.14.10.dist-info/METADATA' removed 'bluepyopt-1.14.10.dist-info/LICENSE.txt' removed 'bluepyopt-1.14.10.dist-info/COPYING' removed 'bluepyopt-1.14.10.dist-info/COPYING.lesser' removed 'bluepyopt-1.14.10.dist-info/AUTHORS.txt' removed directory 'bluepyopt-1.14.10.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ar35It + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/pyproject-wheeldir Processing /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/versioneer.py:432: SyntaxWarning: invalid escape sequence '\s' LONG_VERSION_PY["git"] = ''' Warning: 'keywords' should be a list, got type 'tuple' running dist_info creating /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info writing /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-modern-metadata-lunrevxt/bluepyopt-1.14.10.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: bluepyopt Building wheel for bluepyopt (pyproject.toml): started Running command Building wheel for bluepyopt (pyproject.toml) Warning: 'keywords' should be a list, got type 'tuple' running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/bluepyopt copying bluepyopt/__init__.py -> build/lib/bluepyopt copying bluepyopt/_version.py -> build/lib/bluepyopt copying bluepyopt/api.py -> build/lib/bluepyopt copying bluepyopt/evaluators.py -> build/lib/bluepyopt copying bluepyopt/objectives.py -> build/lib/bluepyopt copying bluepyopt/optimisations.py -> build/lib/bluepyopt copying bluepyopt/parameters.py -> build/lib/bluepyopt copying bluepyopt/stoppingCriteria.py -> build/lib/bluepyopt copying bluepyopt/tools.py -> build/lib/bluepyopt creating build/lib/bluepyopt/deapext copying bluepyopt/deapext/CMA_MO.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/CMA_SO.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/__init__.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/algorithms.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/hype.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/optimisations.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/optimisationsCMA.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/stoppingCriteria.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/utils.py -> build/lib/bluepyopt/deapext creating build/lib/bluepyopt/ephys copying bluepyopt/ephys/__init__.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/acc.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/base.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/create_acc.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/create_hoc.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/efeatures.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/evaluators.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/extra_features_utils.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/locations.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/mechanisms.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/models.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/morphologies.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/objectives.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/objectivescalculators.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/parameters.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/protocols.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/recordings.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/responses.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/serializer.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/simulators.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/stimuli.py -> build/lib/bluepyopt/ephys creating build/lib/bluepyopt/ipyp copying bluepyopt/ipyp/__init__.py -> build/lib/bluepyopt/ipyp copying bluepyopt/ipyp/bpopt_tasksdb.py -> build/lib/bluepyopt/ipyp creating build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/__init__.py -> build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/biophys.py -> build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/cell.py -> build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/morphology.py -> build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/simulation.py -> build/lib/bluepyopt/neuroml creating build/lib/bluepyopt/tests copying bluepyopt/tests/__init__.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/disable_simplecell_scoop.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_bluepyopt.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_evaluators.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_lfpy.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_parameters.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_simplecell.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_tools.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_l5pc.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_stochkv.py -> build/lib/bluepyopt/tests creating build/lib/bluepyopt/deapext/tools copying bluepyopt/deapext/tools/__init__.py -> build/lib/bluepyopt/deapext/tools copying bluepyopt/deapext/tools/selIBEA.py -> build/lib/bluepyopt/deapext/tools creating build/lib/bluepyopt/ephys/examples copying bluepyopt/ephys/examples/__init__.py -> build/lib/bluepyopt/ephys/examples creating build/lib/bluepyopt/ephys/parameterscalers copying bluepyopt/ephys/parameterscalers/__init__.py -> build/lib/bluepyopt/ephys/parameterscalers copying bluepyopt/ephys/parameterscalers/acc_iexpr.py -> build/lib/bluepyopt/ephys/parameterscalers copying bluepyopt/ephys/parameterscalers/parameterscalers.py -> build/lib/bluepyopt/ephys/parameterscalers creating build/lib/bluepyopt/ephys/examples/simplecell copying bluepyopt/ephys/examples/simplecell/__init__.py -> build/lib/bluepyopt/ephys/examples/simplecell copying bluepyopt/ephys/examples/simplecell/simplecell.py -> build/lib/bluepyopt/ephys/examples/simplecell creating build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/__init__.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/deapext_test_utils.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_algorithms.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_hype.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_optimisations.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_optimisationsCMA.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_selIBEA.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_stoppingCriteria.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_utils.py -> build/lib/bluepyopt/tests/test_deapext creating build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/__init__.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_acc.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_create_acc.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_create_hoc.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_evaluators.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_extra_features_utils.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_features.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_init.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_locations.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_mechanisms.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_models.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_morphologies.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_objectives.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_parameters.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_parameterscalers.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_protocols.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_recordings.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_serializer.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_simulators.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_stimuli.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/utils.py -> build/lib/bluepyopt/tests/test_ephys creating build/lib/bluepyopt/tests/test_ephys/testmodels copying bluepyopt/tests/test_ephys/testmodels/__init__.py -> build/lib/bluepyopt/tests/test_ephys/testmodels copying bluepyopt/tests/test_ephys/testmodels/dummycells.py -> build/lib/bluepyopt/tests/test_ephys/testmodels creating build/lib/bluepyopt/ephys/static copying bluepyopt/ephys/static/arbor_mechanisms.json -> build/lib/bluepyopt/ephys/static creating build/lib/bluepyopt/ephys/templates copying bluepyopt/ephys/templates/cell_template.jinja2 -> build/lib/bluepyopt/ephys/templates creating build/lib/bluepyopt/ephys/templates/acc copying bluepyopt/ephys/templates/acc/_json_template.jinja2 -> build/lib/bluepyopt/ephys/templates/acc copying bluepyopt/ephys/templates/acc/decor_acc_template.jinja2 -> build/lib/bluepyopt/ephys/templates/acc copying bluepyopt/ephys/templates/acc/label_dict_acc_template.jinja2 -> build/lib/bluepyopt/ephys/templates/acc copying bluepyopt/ephys/examples/simplecell/simple.swc -> build/lib/bluepyopt/ephys/examples/simplecell creating build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Ca.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Ca_HVA.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Ca_LVAst.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Ih.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Im.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/K_Pst.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/K_Tst.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/KdShu2007.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/NaTa_t.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/NaTs2_t.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Nap_Et2.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/SK_E2.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/SKv3_1.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/StochKv_deterministic.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/baseCaDynamics_E2_NML2.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/pas.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms UPDATING build/lib/bluepyopt/_version.py set build/lib/bluepyopt/_version.py to '1.14.10' installing to build/bdist.linux-aarch64/wheel running install running install_lib creating build/bdist.linux-aarch64 creating build/bdist.linux-aarch64/wheel creating build/bdist.linux-aarch64/wheel/bluepyopt copying build/lib/bluepyopt/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt copying build/lib/bluepyopt/api.py -> build/bdist.linux-aarch64/wheel/./bluepyopt copying build/lib/bluepyopt/evaluators.py -> build/bdist.linux-aarch64/wheel/./bluepyopt copying build/lib/bluepyopt/objectives.py -> build/bdist.linux-aarch64/wheel/./bluepyopt copying build/lib/bluepyopt/optimisations.py -> build/bdist.linux-aarch64/wheel/./bluepyopt copying build/lib/bluepyopt/parameters.py -> build/bdist.linux-aarch64/wheel/./bluepyopt copying build/lib/bluepyopt/stoppingCriteria.py -> build/bdist.linux-aarch64/wheel/./bluepyopt copying build/lib/bluepyopt/tools.py -> build/bdist.linux-aarch64/wheel/./bluepyopt creating build/bdist.linux-aarch64/wheel/bluepyopt/deapext copying build/lib/bluepyopt/deapext/CMA_MO.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/CMA_SO.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/algorithms.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/hype.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/optimisations.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/optimisationsCMA.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/stoppingCriteria.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/utils.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext creating build/bdist.linux-aarch64/wheel/bluepyopt/deapext/tools copying build/lib/bluepyopt/deapext/tools/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext/tools copying build/lib/bluepyopt/deapext/tools/selIBEA.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/deapext/tools creating build/bdist.linux-aarch64/wheel/bluepyopt/ephys copying build/lib/bluepyopt/ephys/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/acc.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/base.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/create_acc.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/create_hoc.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/efeatures.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/evaluators.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/extra_features_utils.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/locations.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/mechanisms.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/models.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/morphologies.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/objectives.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/objectivescalculators.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/parameters.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/protocols.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/recordings.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/responses.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/serializer.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/simulators.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/stimuli.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys creating build/bdist.linux-aarch64/wheel/bluepyopt/ephys/examples copying build/lib/bluepyopt/ephys/examples/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/examples creating build/bdist.linux-aarch64/wheel/bluepyopt/ephys/examples/simplecell copying build/lib/bluepyopt/ephys/examples/simplecell/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/examples/simplecell copying build/lib/bluepyopt/ephys/examples/simplecell/simplecell.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/examples/simplecell copying build/lib/bluepyopt/ephys/examples/simplecell/simple.swc -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/examples/simplecell creating build/bdist.linux-aarch64/wheel/bluepyopt/ephys/parameterscalers copying build/lib/bluepyopt/ephys/parameterscalers/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/parameterscalers copying build/lib/bluepyopt/ephys/parameterscalers/acc_iexpr.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/parameterscalers copying build/lib/bluepyopt/ephys/parameterscalers/parameterscalers.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/parameterscalers creating build/bdist.linux-aarch64/wheel/bluepyopt/ephys/static copying build/lib/bluepyopt/ephys/static/arbor_mechanisms.json -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/static creating build/bdist.linux-aarch64/wheel/bluepyopt/ephys/templates copying build/lib/bluepyopt/ephys/templates/cell_template.jinja2 -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/templates creating build/bdist.linux-aarch64/wheel/bluepyopt/ephys/templates/acc copying build/lib/bluepyopt/ephys/templates/acc/_json_template.jinja2 -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/templates/acc copying build/lib/bluepyopt/ephys/templates/acc/decor_acc_template.jinja2 -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/templates/acc copying build/lib/bluepyopt/ephys/templates/acc/label_dict_acc_template.jinja2 -> build/bdist.linux-aarch64/wheel/./bluepyopt/ephys/templates/acc creating build/bdist.linux-aarch64/wheel/bluepyopt/ipyp copying build/lib/bluepyopt/ipyp/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ipyp copying build/lib/bluepyopt/ipyp/bpopt_tasksdb.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/ipyp creating build/bdist.linux-aarch64/wheel/bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/biophys.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/cell.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/morphology.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/simulation.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml creating build/bdist.linux-aarch64/wheel/bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Ca.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Ca_HVA.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Ca_LVAst.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Ih.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Im.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/K_Pst.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/K_Tst.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/KdShu2007.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/NaTa_t.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/NaTs2_t.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Nap_Et2.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/SK_E2.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/SKv3_1.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/StochKv_deterministic.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/baseCaDynamics_E2_NML2.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/pas.channel.nml -> build/bdist.linux-aarch64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms creating build/bdist.linux-aarch64/wheel/bluepyopt/tests copying build/lib/bluepyopt/tests/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/disable_simplecell_scoop.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_bluepyopt.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_evaluators.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_lfpy.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_parameters.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_simplecell.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_tools.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_l5pc.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_stochkv.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests creating build/bdist.linux-aarch64/wheel/bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/deapext_test_utils.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_algorithms.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_hype.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_optimisations.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_optimisationsCMA.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_selIBEA.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_stoppingCriteria.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_utils.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_deapext creating build/bdist.linux-aarch64/wheel/bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_acc.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_create_acc.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_create_hoc.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_evaluators.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_extra_features_utils.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_features.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_init.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_locations.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_mechanisms.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_models.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_morphologies.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_objectives.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_parameters.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_parameterscalers.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_protocols.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_recordings.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_serializer.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_simulators.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_stimuli.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/utils.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys creating build/bdist.linux-aarch64/wheel/bluepyopt/tests/test_ephys/testmodels copying build/lib/bluepyopt/tests/test_ephys/testmodels/__init__.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys/testmodels copying build/lib/bluepyopt/tests/test_ephys/testmodels/dummycells.py -> build/bdist.linux-aarch64/wheel/./bluepyopt/tests/test_ephys/testmodels copying build/lib/bluepyopt/_version.py -> build/bdist.linux-aarch64/wheel/./bluepyopt running install_egg_info running egg_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' Copying bluepyopt.egg-info to build/bdist.linux-aarch64/wheel/./bluepyopt-1.14.10-py3.13.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/bluepyopt-1.14.10.dist-info/WHEEL creating '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir/pip-wheel-xwr0kmme/.tmp-uejp71fe/bluepyopt-1.14.10-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'bluepyopt/__init__.py' adding 'bluepyopt/_version.py' adding 'bluepyopt/api.py' adding 'bluepyopt/evaluators.py' adding 'bluepyopt/objectives.py' adding 'bluepyopt/optimisations.py' adding 'bluepyopt/parameters.py' adding 'bluepyopt/stoppingCriteria.py' adding 'bluepyopt/tools.py' adding 'bluepyopt/deapext/CMA_MO.py' adding 'bluepyopt/deapext/CMA_SO.py' adding 'bluepyopt/deapext/__init__.py' adding 'bluepyopt/deapext/algorithms.py' adding 'bluepyopt/deapext/hype.py' adding 'bluepyopt/deapext/optimisations.py' adding 'bluepyopt/deapext/optimisationsCMA.py' adding 'bluepyopt/deapext/stoppingCriteria.py' adding 'bluepyopt/deapext/utils.py' adding 'bluepyopt/deapext/tools/__init__.py' adding 'bluepyopt/deapext/tools/selIBEA.py' adding 'bluepyopt/ephys/__init__.py' adding 'bluepyopt/ephys/acc.py' adding 'bluepyopt/ephys/base.py' adding 'bluepyopt/ephys/create_acc.py' adding 'bluepyopt/ephys/create_hoc.py' adding 'bluepyopt/ephys/efeatures.py' adding 'bluepyopt/ephys/evaluators.py' adding 'bluepyopt/ephys/extra_features_utils.py' adding 'bluepyopt/ephys/locations.py' adding 'bluepyopt/ephys/mechanisms.py' adding 'bluepyopt/ephys/models.py' adding 'bluepyopt/ephys/morphologies.py' adding 'bluepyopt/ephys/objectives.py' adding 'bluepyopt/ephys/objectivescalculators.py' adding 'bluepyopt/ephys/parameters.py' adding 'bluepyopt/ephys/protocols.py' adding 'bluepyopt/ephys/recordings.py' adding 'bluepyopt/ephys/responses.py' adding 'bluepyopt/ephys/serializer.py' adding 'bluepyopt/ephys/simulators.py' adding 'bluepyopt/ephys/stimuli.py' adding 'bluepyopt/ephys/examples/__init__.py' adding 'bluepyopt/ephys/examples/simplecell/__init__.py' adding 'bluepyopt/ephys/examples/simplecell/simple.swc' adding 'bluepyopt/ephys/examples/simplecell/simplecell.py' adding 'bluepyopt/ephys/parameterscalers/__init__.py' adding 'bluepyopt/ephys/parameterscalers/acc_iexpr.py' adding 'bluepyopt/ephys/parameterscalers/parameterscalers.py' adding 'bluepyopt/ephys/static/arbor_mechanisms.json' adding 'bluepyopt/ephys/templates/cell_template.jinja2' adding 'bluepyopt/ephys/templates/acc/_json_template.jinja2' adding 'bluepyopt/ephys/templates/acc/decor_acc_template.jinja2' adding 'bluepyopt/ephys/templates/acc/label_dict_acc_template.jinja2' adding 'bluepyopt/ipyp/__init__.py' adding 'bluepyopt/ipyp/bpopt_tasksdb.py' adding 'bluepyopt/neuroml/__init__.py' adding 'bluepyopt/neuroml/biophys.py' adding 'bluepyopt/neuroml/cell.py' adding 'bluepyopt/neuroml/morphology.py' adding 'bluepyopt/neuroml/simulation.py' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Ca.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Ca_HVA.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Ca_LVAst.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Ih.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Im.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/K_Pst.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/K_Tst.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/KdShu2007.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/NaTa_t.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/NaTs2_t.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Nap_Et2.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/SK_E2.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/SKv3_1.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/StochKv_deterministic.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/baseCaDynamics_E2_NML2.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/pas.channel.nml' adding 'bluepyopt/tests/__init__.py' adding 'bluepyopt/tests/disable_simplecell_scoop.py' adding 'bluepyopt/tests/test_bluepyopt.py' adding 'bluepyopt/tests/test_evaluators.py' adding 'bluepyopt/tests/test_l5pc.py' adding 'bluepyopt/tests/test_lfpy.py' adding 'bluepyopt/tests/test_parameters.py' adding 'bluepyopt/tests/test_simplecell.py' adding 'bluepyopt/tests/test_stochkv.py' adding 'bluepyopt/tests/test_tools.py' adding 'bluepyopt/tests/test_deapext/__init__.py' adding 'bluepyopt/tests/test_deapext/deapext_test_utils.py' adding 'bluepyopt/tests/test_deapext/test_algorithms.py' adding 'bluepyopt/tests/test_deapext/test_hype.py' adding 'bluepyopt/tests/test_deapext/test_optimisations.py' adding 'bluepyopt/tests/test_deapext/test_optimisationsCMA.py' adding 'bluepyopt/tests/test_deapext/test_selIBEA.py' adding 'bluepyopt/tests/test_deapext/test_stoppingCriteria.py' adding 'bluepyopt/tests/test_deapext/test_utils.py' adding 'bluepyopt/tests/test_ephys/__init__.py' adding 'bluepyopt/tests/test_ephys/test_acc.py' adding 'bluepyopt/tests/test_ephys/test_create_acc.py' adding 'bluepyopt/tests/test_ephys/test_create_hoc.py' adding 'bluepyopt/tests/test_ephys/test_evaluators.py' adding 'bluepyopt/tests/test_ephys/test_extra_features_utils.py' adding 'bluepyopt/tests/test_ephys/test_features.py' adding 'bluepyopt/tests/test_ephys/test_init.py' adding 'bluepyopt/tests/test_ephys/test_locations.py' adding 'bluepyopt/tests/test_ephys/test_mechanisms.py' adding 'bluepyopt/tests/test_ephys/test_models.py' adding 'bluepyopt/tests/test_ephys/test_morphologies.py' adding 'bluepyopt/tests/test_ephys/test_objectives.py' adding 'bluepyopt/tests/test_ephys/test_parameters.py' adding 'bluepyopt/tests/test_ephys/test_parameterscalers.py' adding 'bluepyopt/tests/test_ephys/test_protocols.py' adding 'bluepyopt/tests/test_ephys/test_recordings.py' adding 'bluepyopt/tests/test_ephys/test_serializer.py' adding 'bluepyopt/tests/test_ephys/test_simulators.py' adding 'bluepyopt/tests/test_ephys/test_stimuli.py' adding 'bluepyopt/tests/test_ephys/utils.py' adding 'bluepyopt/tests/test_ephys/testmodels/__init__.py' adding 'bluepyopt/tests/test_ephys/testmodels/dummycells.py' adding 'bluepyopt-1.14.10.dist-info/AUTHORS.txt' adding 'bluepyopt-1.14.10.dist-info/COPYING' adding 'bluepyopt-1.14.10.dist-info/COPYING.lesser' adding 'bluepyopt-1.14.10.dist-info/LICENSE.txt' adding 'bluepyopt-1.14.10.dist-info/METADATA' adding 'bluepyopt-1.14.10.dist-info/WHEEL' adding 'bluepyopt-1.14.10.dist-info/entry_points.txt' adding 'bluepyopt-1.14.10.dist-info/top_level.txt' adding 'bluepyopt-1.14.10.dist-info/RECORD' removing build/bdist.linux-aarch64/wheel Building wheel for bluepyopt (pyproject.toml): finished with status 'done' Created wheel for bluepyopt: filename=bluepyopt-1.14.10-py3-none-any.whl size=208268 sha256=bd85a8151e935abaa536ad5b40b3bfb7e1bcea22a561d45cbe17bde20d034f2e Stored in directory: /builddir/.cache/pip/wheels/1c/b7/66/bea8bae800ded8bd4bf4a24b904ac47ecdb7e949d848d2c647 Successfully built bluepyopt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.3kbJ2j + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + '[' /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.11-build + mkdir /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e ++ ls /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/pyproject-wheeldir/bluepyopt-1.14.10-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=bluepyopt==1.14.10 + '[' -z bluepyopt==1.14.10 ']' + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/pyproject-wheeldir bluepyopt==1.14.10 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/pyproject-wheeldir Processing ./pyproject-wheeldir/bluepyopt-1.14.10-py3-none-any.whl Installing collected packages: bluepyopt Creating /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin changing mode of /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin/bpopt_tasksdb to 755 Successfully installed bluepyopt-1.14.10 + '[' -d /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin/bpopt_tasksdb /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin/bpopt_tasksdb: updating + rm -rfv /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/bluepyopt-1.14.10.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.10.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT --record /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.10.dist-info/RECORD --output /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-record + rm -fv /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.10.dist-info/RECORD removed '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.10.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.10.dist-info/REQUESTED removed '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.10.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-files --output-modules /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-modules --buildroot /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-record --prefix /usr -l bluepyopt + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j12 Bytecompiling .py files below /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j12 /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/tools/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/tools/__pycache__/selIBEA.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/hype.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/examples/simplecell/__pycache__/simplecell.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/examples/simplecell/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/algorithms.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/CMA_SO.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/examples/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/CMA_MO.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/base.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/parameterscalers/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/optimisations.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/acc.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/optimisationsCMA.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/stoppingCriteria.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/evaluators.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/extra_features_utils.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/parameterscalers/__pycache__/acc_iexpr.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/parameterscalers/__pycache__/parameterscalers.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/simulators.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/recordings.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/extra_features_utils.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/recordings.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/parameters.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/responses.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/serializer.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/serializer.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/create_hoc.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/create_hoc.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/mechanisms.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/objectivescalculators.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/morphologies.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/protocols.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ipyp/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/neuroml/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/stimuli.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ipyp/__pycache__/bpopt_tasksdb.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/neuroml/__pycache__/cell.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/objectives.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/create_acc.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/neuroml/__pycache__/morphology.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/neuroml/__pycache__/simulation.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/models.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/efeatures.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/locations.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_selIBEA.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_hype.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/models.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_stoppingCriteria.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_selIBEA.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/neuroml/__pycache__/biophys.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_stoppingCriteria.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_algorithms.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_algorithms.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_hype.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_utils.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/ephys/__pycache__/efeatures.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_utils.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/testmodels/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_optimisations.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_acc.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_acc.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_optimisations.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_optimisationsCMA.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_parameters.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_extra_features_utils.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_extra_features_utils.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/deapext_test_utils.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_parameters.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/testmodels/__pycache__/dummycells.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_mechanisms.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_deapext/__pycache__/test_optimisationsCMA.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_mechanisms.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_serializer.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_serializer.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_init.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_parameterscalers.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_simulators.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_models.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_simulators.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_features.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_parameterscalers.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_features.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_init.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_morphologies.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_models.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_protocols.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_stimuli.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_morphologies.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_stimuli.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_recordings.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_create_hoc.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_recordings.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_create_acc.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_create_hoc.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_locations.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_create_acc.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_objectives.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_bluepyopt.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/disable_simplecell_scoop.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_protocols.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/disable_simplecell_scoop.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_tools.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_evaluators.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_objectives.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_lfpy.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_lfpy.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_evaluators.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_parameters.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_tools.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_evaluators.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_evaluators.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_locations.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_simplecell.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_parameters.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_stochkv.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/_version.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/api.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/optimisations.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/evaluators.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/stoppingCriteria.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_stochkv.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/objectives.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_l5pc.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/tools.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/parameters.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_l5pc.cpython-313.opt-1.pyc: replacing with normalized version Scanned 37 directories and 320 files, processed 135 inodes, 135 modified (78 replaced + 57 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/python-bluepyopt-1.14.11-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.tLxoEO + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.11-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e + '[' '!' -f /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-modules ']' + PATH=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages + _PYTHONSITE=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-bluepyopt-1.14.11-build/python-bluepyopt-1.14.11-3.fc42.aarch64-pyproject-modules -e '*neuroml*' -e 'bluepyopt.tests*' Check import: bluepyopt Check import: bluepyopt.api Check import: bluepyopt.deapext Check import: bluepyopt.deapext.CMA_MO Check import: bluepyopt.deapext.CMA_SO Check import: bluepyopt.deapext.algorithms Check import: bluepyopt.deapext.hype Check import: bluepyopt.deapext.optimisations Check import: bluepyopt.deapext.optimisationsCMA Check import: bluepyopt.deapext.stoppingCriteria Check import: bluepyopt.deapext.tools Check import: bluepyopt.deapext.tools.selIBEA Check import: bluepyopt.deapext.utils Check import: bluepyopt.ephys Check import: bluepyopt.ephys.acc Check import: bluepyopt.ephys.base Check import: bluepyopt.ephys.create_acc Check import: bluepyopt.ephys.create_hoc Check import: bluepyopt.ephys.efeatures Check import: bluepyopt.ephys.evaluators Check import: bluepyopt.ephys.examples Check import: bluepyopt.ephys.examples.simplecell Check import: bluepyopt.ephys.examples.simplecell.simplecell Check import: bluepyopt.ephys.extra_features_utils Check import: bluepyopt.ephys.locations Check import: bluepyopt.ephys.mechanisms Check import: bluepyopt.ephys.models Check import: bluepyopt.ephys.morphologies Check import: bluepyopt.ephys.objectives Check import: bluepyopt.ephys.objectivescalculators Check import: bluepyopt.ephys.parameters Check import: bluepyopt.ephys.parameterscalers Check import: bluepyopt.ephys.parameterscalers.acc_iexpr Check import: bluepyopt.ephys.parameterscalers.parameterscalers Check import: bluepyopt.ephys.protocols Check import: bluepyopt.ephys.recordings Check import: bluepyopt.ephys.responses Check import: bluepyopt.ephys.serializer Check import: bluepyopt.ephys.simulators Check import: bluepyopt.ephys.stimuli Check import: bluepyopt.evaluators Check import: bluepyopt.ipyp Check import: bluepyopt.ipyp.bpopt_tasksdb Check import: bluepyopt.objectives Check import: bluepyopt.optimisations Check import: bluepyopt.parameters Check import: bluepyopt.stoppingCriteria Check import: bluepyopt.tools + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=12 + /usr/bin/make -O -j12 V=1 VERBOSE=1 stochkv_prepare l5pc_prepare sc_prepare meta_prepare cd examples/stochkv && ls mechanisms && nrnivmodl mechanisms StochKv.mod StochKv3.mod /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv Mod files: "mechanisms/mechanisms/StochKv.mod" "mechanisms/mechanisms/StochKv3.mod" Creating 'aarch64' directory for .o files. make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' -> NMODL ../mechanisms/StochKv.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "StochKv.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' -> NMODL ../mechanisms/StochKv3.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "StochKv3.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' -> Compiling mod_func.cpp gcc -DHAVE_CONFIG_H -I. -I/usr/include -fPIC -c mod_func.cpp -o mod_func.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' -> Compiling StochKv.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c StochKv.c -o StochKv.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' -> Compiling StochKv3.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c StochKv3.c -o StochKv3.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' => LINKING shared library ./libnrnmech.so g++ -std=c++11 -shared -I /usr/include -o ./libnrnmech.so -Wl,-soname,libnrnmech.so \ ./mod_func.o ./StochKv.o ./StochKv3.o -L/usr/lib -lnrniv -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext rm -f ./.libs/libnrnmech.so ; mkdir -p ./.libs ; cp ./libnrnmech.so ./.libs/libnrnmech.so make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext g++ -std=c++11 -I /usr/include -I /usr/include/nrncvode -DAUTO_DLOPEN_NRNMECH=0 /usr/share/nrn/nrnmain.cpp -o ./special \ -L . -lnrnmech -L/usr/lib -lnrniv -lnrnmech -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64' Successfully created aarch64/special make[1]: warning: -j4 forced in submake: resetting jobserver mode. Translating StochKv.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64/StochKv.c Warning: bnl undefined. (declared within VERBATIM?) Warning: value undefined. (declared within VERBATIM?) Thread Safe Translating StochKv3.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/stochkv/aarch64/StochKv3.c Warning: bnl undefined. (declared within VERBATIM?) Warning: value undefined. (declared within VERBATIM?) Thread Safe cd examples/l5pc && nrnivmodl mechanisms /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc Mod files: "mechanisms/mechanisms/CaDynamics_E2.mod" "mechanisms/mechanisms/Ca_HVA.mod" "mechanisms/mechanisms/Ca_LVAst.mod" "mechanisms/mechanisms/Ih.mod" "mechanisms/mechanisms/Im.mod" "mechanisms/mechanisms/K_Pst.mod" "mechanisms/mechanisms/K_Tst.mod" "mechanisms/mechanisms/NaTa_t.mod" "mechanisms/mechanisms/NaTs2_t.mod" "mechanisms/mechanisms/Nap_Et2.mod" "mechanisms/mechanisms/SK_E2.mod" "mechanisms/mechanisms/SKv3_1.mod" Creating 'aarch64' directory for .o files. make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/CaDynamics_E2.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "CaDynamics_E2.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/Ca_HVA.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Ca_HVA.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/Ca_LVAst.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Ca_LVAst.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/Ih.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Ih.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/Im.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Im.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/K_Pst.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "K_Pst.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/K_Tst.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "K_Tst.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/NaTa_t.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "NaTa_t.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/NaTs2_t.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "NaTs2_t.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/SK_E2.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "SK_E2.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/Nap_Et2.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Nap_Et2.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> NMODL ../mechanisms/SKv3_1.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "SKv3_1.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling mod_func.cpp gcc -DHAVE_CONFIG_H -I. -I/usr/include -fPIC -c mod_func.cpp -o mod_func.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling CaDynamics_E2.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c CaDynamics_E2.c -o CaDynamics_E2.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling Ca_HVA.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c Ca_HVA.c -o Ca_HVA.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling Ca_LVAst.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c Ca_LVAst.c -o Ca_LVAst.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling Ih.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c Ih.c -o Ih.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling Im.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c Im.c -o Im.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling K_Pst.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c K_Pst.c -o K_Pst.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling K_Tst.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c K_Tst.c -o K_Tst.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling NaTa_t.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c NaTa_t.c -o NaTa_t.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling NaTs2_t.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c NaTs2_t.c -o NaTs2_t.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling SK_E2.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c SK_E2.c -o SK_E2.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling Nap_Et2.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c Nap_Et2.c -o Nap_Et2.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' -> Compiling SKv3_1.c gcc -DHAVE_CONFIG_H -I"../mechanisms" -I. -I/usr/include -fPIC -c SKv3_1.c -o SKv3_1.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' => LINKING shared library ./libnrnmech.so g++ -std=c++11 -shared -I /usr/include -o ./libnrnmech.so -Wl,-soname,libnrnmech.so \ ./mod_func.o ./CaDynamics_E2.o ./Ca_HVA.o ./Ca_LVAst.o ./Ih.o ./Im.o ./K_Pst.o ./K_Tst.o ./NaTa_t.o ./NaTs2_t.o ./Nap_Et2.o ./SK_E2.o ./SKv3_1.o -L/usr/lib -lnrniv -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext rm -f ./.libs/libnrnmech.so ; mkdir -p ./.libs ; cp ./libnrnmech.so ./.libs/libnrnmech.so make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext g++ -std=c++11 -I /usr/include -I /usr/include/nrncvode -DAUTO_DLOPEN_NRNMECH=0 /usr/share/nrn/nrnmain.cpp -o ./special \ -L . -lnrnmech -L/usr/lib -lnrniv -lnrnmech -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64' Successfully created aarch64/special make[1]: warning: -j4 forced in submake: resetting jobserver mode. Translating CaDynamics_E2.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/CaDynamics_E2.c Thread Safe Translating Ca_HVA.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/Ca_HVA.c Thread Safe Translating Ca_LVAst.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/Ca_LVAst.c Thread Safe Translating Ih.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/Ih.c Thread Safe Translating Im.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/Im.c Thread Safe Translating K_Pst.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/K_Pst.c Thread Safe Translating K_Tst.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/K_Tst.c Thread Safe Translating NaTa_t.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/NaTa_t.c Thread Safe Translating NaTs2_t.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/NaTs2_t.c Thread Safe Translating SK_E2.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/SK_E2.c Thread Safe Translating Nap_Et2.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/Nap_Et2.c Thread Safe Translating SKv3_1.mod into /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/examples/l5pc/aarch64/SKv3_1.c Thread Safe cd examples/metaparameters && \ jupyter nbconvert --to python metaparameters.ipynb && \ sed '/get_ipython/d;/plt\./d;/plot_responses/d;/import matplotlib/d' metaparameters.py >metaparameters.tmp && \ mv metaparameters.tmp metaparameters.py [NbConvertApp] Converting notebook metaparameters.ipynb to python [NbConvertApp] Writing 9314 bytes to metaparameters.py cd examples/simplecell && \ jupyter nbconvert --to python simplecell.ipynb && \ sed '/get_ipython/d;/plt\./d;/plot_responses/d;/import matplotlib/d' simplecell.py >simplecell.tmp && \ mv simplecell.tmp simplecell.py && \ jupyter nbconvert --to python simplecell_arbor.ipynb && \ sed '/get_ipython/d;/plt\./d;/plot_responses/d;/import matplotlib/d' simplecell_arbor.py >simplecell_arbor.tmp && \ mv simplecell_arbor.tmp simplecell_arbor.py [NbConvertApp] Converting notebook simplecell.ipynb to python [NbConvertApp] Writing 10724 bytes to simplecell.py [NbConvertApp] Converting notebook simplecell_arbor.ipynb to python [NbConvertApp] Writing 10785 bytes to simplecell_arbor.py cd examples/l5pc && \ jupyter nbconvert --to python L5PC.ipynb && \ sed '/get_ipython/d;/plt\./d;/plot_responses/d;/import matplotlib/d;/neurom/d;/axes/d;/fig/d;/for index/d' L5PC.py >L5PC.tmp && \ mv L5PC.tmp L5PC.py && \ python3 l5pc_validate_neuron_arbor_pm.py --prepare-only --regions somatic --param-values ../../bluepyopt/tests/testdata/l5pc_validate_neuron_arbor/param_values.json && \ jupyter nbconvert --to python l5pc_validate_neuron_arbor_somatic.ipynb && \ sed '/get_ipython/d;/plt\./d;/import matplotlib/d;/from IPython.display/d;/multiprocessing/d;s/pool.map/map/g;s/# test_l5pc: insert //g;/# test_l5pc: skip/d' l5pc_validate_neuron_arbor_somatic.py >l5pc_validate_neuron_arbor_somatic.tmp && \ mv l5pc_validate_neuron_arbor_somatic.tmp l5pc_validate_neuron_arbor_somatic.py [NbConvertApp] Converting notebook L5PC.ipynb to python [NbConvertApp] Writing 9158 bytes to L5PC.py INFO:root:Outputting l5pc_validate_neuron_arbor notebook to ./l5pc_validate_neuron_arbor_somatic.ipynb with all local mechs/params... mechs = {'all': ['pas'], 'somatic': ['NaTs2_t', 'SKv3_1', 'SK_E2', 'CaDynamics_E2', 'Ca_HVA', 'Ca_LVAst', 'Ih']} extra_params = {'v_init': 'global', 'celsius': 'global', 'g_pas': ['all'], 'e_pas': ['all'], 'cm': ['all'], 'Ra': ['all'], 'ena': ['somatic'], 'ek': ['somatic']} INFO:papermill:Input Notebook: l5pc_validate_neuron_arbor.ipynb INFO:papermill:Output Notebook: ./l5pc_validate_neuron_arbor_somatic.ipynb [NbConvertApp] Converting notebook l5pc_validate_neuron_arbor_somatic.ipynb to python [NbConvertApp] Writing 24826 bytes to l5pc_validate_neuron_arbor_somatic.py + k='not test_metaparameter' + k='not test_metaparameter and not test_NrnRampPulse_instantiate' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run and not test_optimisationsCMA_MO_run' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run and not test_optimisationsCMA_MO_run and not test_LFPySquarePulse_instantiate' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run and not test_optimisationsCMA_MO_run and not test_LFPySquarePulse_instantiate and not test_write_acc_expsyn' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=12 + /usr/bin/pytest bluepyopt/tests/ -v -m 'unit and not neuroml' '-k not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run and not test_optimisationsCMA_MO_run and not test_LFPySquarePulse_instantiate and not test_write_acc_expsyn' ============================= test session starts ============================== platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e configfile: pytest.ini collecting ... collected 183 items / 20 deselected / 163 selected bluepyopt/tests/test_bluepyopt.py::test_import PASSED [ 0%] bluepyopt/tests/test_deapext/test_algorithms.py::test_eaAlphaMuPlusLambdaCheckpoint PASSED [ 1%] bluepyopt/tests/test_deapext/test_algorithms.py::test_eaAlphaMuPlusLambdaCheckpoint_with_checkpoint PASSED [ 1%] bluepyopt/tests/test_deapext/test_hype.py::test_hypeIndicatorExact PASSED [ 2%] bluepyopt/tests/test_deapext/test_hype.py::test_hypeIndicatorSampled PASSED [ 3%] bluepyopt/tests/test_deapext/test_optimisations.py::test_DEAPOptimisation_constructor PASSED [ 3%] bluepyopt/tests/test_deapext/test_optimisations.py::test_IBEADEAPOptimisation_constructor PASSED [ 4%] bluepyopt/tests/test_deapext/test_optimisations.py::test_selectorname PASSED [ 4%] bluepyopt/tests/test_deapext/test_optimisationsCMA.py::test_optimisationsCMA_normspace PASSED [ 5%] bluepyopt/tests/test_deapext/test_selIBEA.py::test_calc_fitness_components PASSED [ 6%] bluepyopt/tests/test_deapext/test_selIBEA.py::test_mating_selection PASSED [ 6%] bluepyopt/tests/test_deapext/test_selIBEA.py::test_selibea_init PASSED [ 7%] bluepyopt/tests/test_deapext/test_stoppingCriteria.py::test_MaxNGen PASSED [ 7%] bluepyopt/tests/test_deapext/test_utils.py::test_run_next_gen_condition PASSED [ 8%] bluepyopt/tests/test_ephys/test_acc.py::test_arbor_labels PASSED [ 9%] bluepyopt/tests/test_ephys/test_create_acc.py::test_read_templates PASSED [ 9%] bluepyopt/tests/test_ephys/test_create_acc.py::test_Nrn2ArbParamAdapter_param_name PASSED [ 10%] bluepyopt/tests/test_ephys/test_create_acc.py::test_Nrn2ArbParamAdapter_param_value PASSED [ 11%] bluepyopt/tests/test_ephys/test_create_acc.py::test_Nrn2ArbParamAdapter_format PASSED [ 11%] bluepyopt/tests/test_ephys/test_create_acc.py::test_Nrn2ArbMechGrouper_format_params_and_group_by_mech PASSED [ 12%] bluepyopt/tests/test_ephys/test_create_acc.py::test_Nrn2ArbMechGrouper_process_global PASSED [ 12%] bluepyopt/tests/test_ephys/test_create_acc.py::test_Nrn2ArbMechGrouper_is_global_property PASSED [ 13%] bluepyopt/tests/test_ephys/test_create_acc.py::test_separate_global_properties PASSED [ 14%] bluepyopt/tests/test_ephys/test_create_acc.py::test_Nrn2ArbMechGrouper_process_local PASSED [ 14%] bluepyopt/tests/test_ephys/test_create_acc.py::test_ArbNmodlMechFormatter_load_mech_catalogue_meta PASSED [ 15%] bluepyopt/tests/test_ephys/test_create_acc.py::test_ArbNmodlMechFormatter_mech_name PASSED [ 15%] bluepyopt/tests/test_ephys/test_create_acc.py::test_ArbNmodlMechFormatter_translate_density PASSED [ 16%] bluepyopt/tests/test_ephys/test_create_acc.py::test_arb_populate_label_dict PASSED [ 17%] bluepyopt/tests/test_ephys/test_create_acc.py::test_create_acc PASSED [ 17%] bluepyopt/tests/test_ephys/test_create_acc.py::test_create_acc_filename PASSED [ 18%] bluepyopt/tests/test_ephys/test_create_acc.py::test_create_acc_replace_axon PASSED [ 19%] bluepyopt/tests/test_ephys/test_create_acc.py::test_cell_model_write_and_read_acc PASSED [ 19%] bluepyopt/tests/test_ephys/test_create_acc.py::test_cell_model_write_and_read_acc_replace_axon FAILED [ 20%] bluepyopt/tests/test_ephys/test_create_acc.py::test_cell_model_create_acc_replace_axon_without_instantiate PASSED [ 20%] bluepyopt/tests/test_ephys/test_create_acc.py::test_write_acc_simple FAILED [ 21%] bluepyopt/tests/test_ephys/test_create_acc.py::test_write_acc_l5pc FAILED [ 22%] bluepyopt/tests/test_ephys/test_create_hoc.py::test_generate_channels_by_location PASSED [ 22%] bluepyopt/tests/test_ephys/test_create_hoc.py::test__generate_channels_by_location PASSED [ 23%] bluepyopt/tests/test_ephys/test_create_hoc.py::test_generate_parameters PASSED [ 23%] bluepyopt/tests/test_ephys/test_create_hoc.py::test__generate_parameters PASSED [ 24%] bluepyopt/tests/test_ephys/test_create_hoc.py::test_create_hoc PASSED [ 25%] bluepyopt/tests/test_ephys/test_create_hoc.py::test_create_hoc_filename PASSED [ 25%] bluepyopt/tests/test_ephys/test_create_hoc.py::test_generate_reinitrng PASSED [ 26%] bluepyopt/tests/test_ephys/test_create_hoc.py::test_range_exprs_to_hoc PASSED [ 26%] bluepyopt/tests/test_ephys/test_create_hoc.py::test_range_exprs_to_hoc_step_scaler PASSED [ 27%] bluepyopt/tests/test_ephys/test_evaluators.py::test_CellEvaluator_init PASSED [ 28%] bluepyopt/tests/test_ephys/test_evaluators.py::test_CellEvaluator_evaluate FAILED [ 28%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_peak_to_valley PASSED [ 29%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_peak_trough_ratio PASSED [ 30%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_halfwidth PASSED [ 30%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_repolarization_slope PASSED [ 31%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_recovery_slope PASSED [ 31%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_peak_image PASSED [ 32%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_relative_amplitude PASSED [ 33%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_peak_time_diff PASSED [ 33%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test__get_trough_and_peak_idx PASSED [ 34%] bluepyopt/tests/test_ephys/test_extra_features_utils.py::test_calculate_features PASSED [ 34%] bluepyopt/tests/test_ephys/test_features.py::test_EFeature PASSED [ 35%] bluepyopt/tests/test_ephys/test_features.py::test_eFELFeature PASSED [ 36%] bluepyopt/tests/test_ephys/test_features.py::test_eFELFeature_max_score PASSED [ 36%] bluepyopt/tests/test_ephys/test_features.py::test_eFELFeature_force_max_score PASSED [ 37%] bluepyopt/tests/test_ephys/test_features.py::test_eFELFeature_double_settings PASSED [ 38%] bluepyopt/tests/test_ephys/test_features.py::test_eFELFeature_int_settings PASSED [ 38%] bluepyopt/tests/test_ephys/test_features.py::test_eFELFeature_string_settings PASSED [ 39%] bluepyopt/tests/test_ephys/test_features.py::test_eFELFeature_serialize PASSED [ 39%] bluepyopt/tests/test_ephys/test_features.py::test_extraFELFeature PASSED [ 40%] bluepyopt/tests/test_ephys/test_features.py::test_masked_cosine_distance PASSED [ 41%] bluepyopt/tests/test_ephys/test_init.py::test_import PASSED [ 41%] bluepyopt/tests/test_ephys/test_init.py::test_ephys_base PASSED [ 42%] bluepyopt/tests/test_ephys/test_locations.py::test_location_init PASSED [ 42%] bluepyopt/tests/test_ephys/test_locations.py::TestNrnSectionCompLocation::test_instantiate PASSED [ 43%] bluepyopt/tests/test_ephys/test_locations.py::TestNrnSeclistCompLocation::test_instantiate FAILED [ 44%] bluepyopt/tests/test_ephys/test_locations.py::TestNrnSeclistSecLocation::test_instantiate PASSED [ 44%] bluepyopt/tests/test_ephys/test_locations.py::TestNrnSomaDistanceCompLocation::test_instantiate PASSED [ 45%] bluepyopt/tests/test_ephys/test_locations.py::TestNrnSecSomaDistanceCompLocation::test_instantiate PASSED [ 46%] bluepyopt/tests/test_ephys/test_locations.py::TestNrnTrunkSomaDistanceCompLocation::test_instantiate FAILED [ 46%] bluepyopt/tests/test_ephys/test_locations.py::test_serialize PASSED [ 47%] bluepyopt/tests/test_ephys/test_mechanisms.py::test_mechanism_serialize PASSED [ 47%] bluepyopt/tests/test_ephys/test_mechanisms.py::test_nrnmod_instantiate FAILED [ 48%] bluepyopt/tests/test_ephys/test_mechanisms.py::test_nrnmod_reinitrng_block PASSED [ 49%] bluepyopt/tests/test_ephys/test_mechanisms.py::test_nrnmod_determinism FAILED [ 49%] bluepyopt/tests/test_ephys/test_mechanisms.py::test_pprocess_instantiate FAILED [ 50%] bluepyopt/tests/test_ephys/test_mechanisms.py::test_string_hash_functions PASSED [ 50%] bluepyopt/tests/test_ephys/test_models.py::test_create_empty_template PASSED [ 51%] bluepyopt/tests/test_ephys/test_models.py::test_model PASSED [ 52%] bluepyopt/tests/test_ephys/test_models.py::test_cellmodel PASSED [ 52%] bluepyopt/tests/test_ephys/test_models.py::test_cellmodel_namecheck PASSED [ 53%] bluepyopt/tests/test_ephys/test_models.py::test_load_hoc_template PASSED [ 53%] bluepyopt/tests/test_ephys/test_models.py::test_HocCellModel PASSED [ 54%] bluepyopt/tests/test_ephys/test_models.py::test_CellModel_create_empty_cell PASSED [ 55%] bluepyopt/tests/test_ephys/test_models.py::test_CellModel_create_hoc PASSED [ 55%] bluepyopt/tests/test_ephys/test_models.py::test_CellModel_destroy PASSED [ 56%] bluepyopt/tests/test_ephys/test_models.py::test_lfpy_create_empty_template PASSED [ 57%] bluepyopt/tests/test_ephys/test_models.py::test_lfpycellmodel PASSED [ 57%] bluepyopt/tests/test_ephys/test_models.py::test_lfpycellmodel_namecheck PASSED [ 58%] bluepyopt/tests/test_ephys/test_models.py::test_load_lfpy_hoc_template PASSED [ 58%] bluepyopt/tests/test_ephys/test_models.py::test_LFPyCellModel_create_empty_cell PASSED [ 59%] bluepyopt/tests/test_ephys/test_models.py::test_LFPyCellModel_create_hoc PASSED [ 60%] bluepyopt/tests/test_ephys/test_models.py::test_LFPyCellModel_destroy PASSED [ 60%] bluepyopt/tests/test_ephys/test_morphologies.py::test_morphology_init PASSED [ 61%] bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_init PASSED [ 61%] bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon FAILED [ 62%] bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon_ax1 FAILED [ 63%] bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon_ax2 FAILED [ 63%] bluepyopt/tests/test_ephys/test_morphologies.py::test_serialize PASSED [ 64%] bluepyopt/tests/test_ephys/test_objectives.py::test_EFeatureObjective PASSED [ 65%] bluepyopt/tests/test_ephys/test_objectives.py::test_SingletonObjective PASSED [ 65%] bluepyopt/tests/test_ephys/test_objectives.py::test_SingletonWeightObjective PASSED [ 66%] bluepyopt/tests/test_ephys/test_objectives.py::test_MaxObjective PASSED [ 66%] bluepyopt/tests/test_ephys/test_objectives.py::test_WeightedSumObjective PASSED [ 67%] bluepyopt/tests/test_ephys/test_parameters.py::test_pprocessparam_instantiate FAILED [ 68%] bluepyopt/tests/test_ephys/test_parameters.py::test_serialize PASSED [ 68%] bluepyopt/tests/test_ephys/test_parameterscalers.py::test_NrnSegmentSomaDistanceScaler_dist_params PASSED [ 69%] bluepyopt/tests/test_ephys/test_parameterscalers.py::test_NrnSegmentSectionDistanceScaler_eval_dist_with_dict PASSED [ 69%] bluepyopt/tests/test_ephys/test_parameterscalers.py::test_NrnSegmentSomaDistanceStepScaler_eval_dist_with_dict PASSED [ 70%] bluepyopt/tests/test_ephys/test_parameterscalers.py::test_serialize PASSED [ 71%] bluepyopt/tests/test_ephys/test_parameterscalers.py::test_parameterscalers_iexpr_generator PASSED [ 71%] bluepyopt/tests/test_ephys/test_parameterscalers.py::test_parameterscalers_iexpr_generator_non_existent_op PASSED [ 72%] bluepyopt/tests/test_ephys/test_parameterscalers.py::test_parameterscalers_iexpr_generator_unsupported_attr PASSED [ 73%] bluepyopt/tests/test_ephys/test_protocols.py::test_distloc_exception FAILED [ 73%] bluepyopt/tests/test_ephys/test_protocols.py::test_sweepprotocol_init PASSED [ 74%] bluepyopt/tests/test_ephys/test_protocols.py::test_sequenceprotocol_init PASSED [ 74%] bluepyopt/tests/test_ephys/test_protocols.py::test_sequenceprotocol_run FAILED [ 75%] bluepyopt/tests/test_ephys/test_protocols.py::test_sequenceprotocol_overwrite PASSED [ 76%] bluepyopt/tests/test_ephys/test_protocols.py::test_stepprotocol_init PASSED [ 76%] bluepyopt/tests/test_ephys/test_protocols.py::test_sweepprotocol_run_unisolated FAILED [ 77%] bluepyopt/tests/test_ephys/test_protocols.py::test_sweepprotocol_run_isolated FAILED [ 77%] bluepyopt/tests/test_ephys/test_protocols.py::test_nrnsimulator_exception FAILED [ 78%] bluepyopt/tests/test_ephys/test_protocols.py::test_sweepprotocol_instantiate_with_LFPyCellModel PASSED [ 79%] bluepyopt/tests/test_ephys/test_recordings.py::test_comprecording_init PASSED [ 79%] bluepyopt/tests/test_ephys/test_recordings.py::test_lfprecording_init PASSED [ 80%] bluepyopt/tests/test_ephys/test_recordings.py::test_lfprecording_instantiate PASSED [ 80%] bluepyopt/tests/test_ephys/test_serializer.py::test_serializer PASSED [ 81%] bluepyopt/tests/test_ephys/test_serializer.py::test_roundtrip_serializer PASSED [ 82%] bluepyopt/tests/test_ephys/test_serializer.py::test_nested_serializer PASSED [ 82%] bluepyopt/tests/test_ephys/test_serializer.py::test_non_instantiable PASSED [ 83%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsimulator_init PASSED [ 84%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsimulator_init_windows PASSED [ 84%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsimulator_cvode_minstep FAILED [ 85%] bluepyopt/tests/test_ephys/test_simulators.py::test_neuron_import PASSED [ 85%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsim_run_dt_exception PASSED [ 86%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsim_run_cvodeactive_dt_exception PASSED [ 87%] bluepyopt/tests/test_ephys/test_simulators.py::test_disable_banner_exception PASSED [ 87%] bluepyopt/tests/test_ephys/test_simulators.py::test_lfpysimulator_init PASSED [ 88%] bluepyopt/tests/test_ephys/test_simulators.py::test_lfpyimulator_init_windows PASSED [ 88%] bluepyopt/tests/test_ephys/test_simulators.py::test__lfpysimulator_neuron_import PASSED [ 89%] bluepyopt/tests/test_ephys/test_simulators.py::test_lfpysim_run_cvodeactive_dt_exception PASSED [ 90%] bluepyopt/tests/test_ephys/test_simulators.py::test_lfpysimulator_disable_banner_exception PASSED [ 90%] bluepyopt/tests/test_ephys/test_stimuli.py::test_stimulus_init PASSED [ 91%] bluepyopt/tests/test_ephys/test_stimuli.py::test_NrnNetStimStimulus_init PASSED [ 92%] bluepyopt/tests/test_ephys/test_stimuli.py::test_NrnNetStimStimulus_instantiate FAILED [ 92%] bluepyopt/tests/test_ephys/test_stimuli.py::test_NrnCurrentPlayStimulus_instantiate FAILED [ 93%] bluepyopt/tests/test_ephys/test_stimuli.py::test_NrnRampPulse_init PASSED [ 93%] bluepyopt/tests/test_ephys/test_stimuli.py::test_LFPySquarePulse_init PASSED [ 94%] bluepyopt/tests/test_evaluators.py::test_evaluator_init PASSED [ 95%] bluepyopt/tests/test_parameters.py::test_parameters_init PASSED [ 95%] bluepyopt/tests/test_parameters.py::test_parameters_fields PASSED [ 96%] bluepyopt/tests/test_parameters.py::test_parameters_str PASSED [ 96%] bluepyopt/tests/test_parameters.py::test_MetaListEqualParameter_init PASSED [ 97%] bluepyopt/tests/test_parameters.py::test_MetaListEqualParameter_freeze_unfreeze PASSED [ 98%] bluepyopt/tests/test_parameters.py::test_MetaListEqualParamete_str PASSED [ 98%] bluepyopt/tests/test_tools.py::test_load PASSED [ 99%] bluepyopt/tests/test_tools.py::test_uint32_seed PASSED [100%] =================================== FAILURES =================================== _______________ test_cell_model_write_and_read_acc_replace_axon ________________ @pytest.mark.unit def test_cell_model_write_and_read_acc_replace_axon(): """ephys.create_acc: Test write_acc and read_acc w/ axon replacement""" cell = make_cell(replace_axon=True) param_values = {"gnabar_hh": 0.1, "gkbar_hh": 0.03} with tempfile.TemporaryDirectory() as acc_dir: try: nrn_sim = ephys.simulators.NrnSimulator() > cell.write_acc(acc_dir, param_values, sim=nrn_sim) bluepyopt/tests/test_ephys/test_create_acc.py:583: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:424: in write_acc create_acc.write_acc(output_dir, self, param_values, bluepyopt/ephys/create_acc.py:878: in write_acc output = cell.create_acc( bluepyopt/ephys/models.py:398: in create_acc self.instantiate_morphology_3d(sim=sim) bluepyopt/ephys/models.py:250: in instantiate_morphology_3d self.instantiate_morphology(sim=sim) bluepyopt/ephys/models.py:241: in instantiate_morphology self.morphology.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = simple_ax2[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError During handling of the above exception, another exception occurred: @pytest.mark.unit def test_cell_model_write_and_read_acc_replace_axon(): """ephys.create_acc: Test write_acc and read_acc w/ axon replacement""" cell = make_cell(replace_axon=True) param_values = {"gnabar_hh": 0.1, "gkbar_hh": 0.03} with tempfile.TemporaryDirectory() as acc_dir: try: nrn_sim = ephys.simulators.NrnSimulator() cell.write_acc(acc_dir, param_values, sim=nrn_sim) except Exception as e: # fail with an older Arbor version > assert isinstance(e, NotImplementedError) E AssertionError: assert False E + where False = isinstance(TypeError('Not an iterable HocObject'), NotImplementedError) bluepyopt/tests/test_ephys/test_create_acc.py:585: AssertionError ____________________________ test_write_acc_simple _____________________________ @pytest.mark.unit def test_write_acc_simple(): SIMPLECELL_PATH = str( ( pathlib.Path(__file__).parent / "../../../examples/simplecell" ).resolve() ) sys.path.insert(0, SIMPLECELL_PATH) ref_dir = (testdata_dir / "acc/simplecell").resolve() old_cwd = os.getcwd() try: os.chdir(SIMPLECELL_PATH) import simplecell_model param_values = { "gnabar_hh": 0.10299326453483033, "gkbar_hh": 0.027124836082684685, } cell = simplecell_model.create(do_replace_axon=True) nrn_sim = ephys.simulators.NrnSimulator() > cell.instantiate_morphology_3d(nrn_sim) bluepyopt/tests/test_ephys/test_create_acc.py:691: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:250: in instantiate_morphology_3d self.instantiate_morphology(sim=sim) bluepyopt/ephys/models.py:241: in instantiate_morphology self.morphology.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = simple_cell[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError _____________________________ test_write_acc_l5pc ______________________________ @pytest.mark.unit def test_write_acc_l5pc(): L5PC_PATH = str( (pathlib.Path(__file__).parent / "../../../examples/l5pc").resolve() ) sys.path.insert(0, L5PC_PATH) ref_dir = (testdata_dir / "acc/l5pc").resolve() old_cwd = os.getcwd() try: import l5pc_model param_values = { "gNaTs2_tbar_NaTs2_t.apical": 0.026145, "gSKv3_1bar_SKv3_1.apical": 0.004226, "gImbar_Im.apical": 0.000143, "gNaTa_tbar_NaTa_t.axonal": 3.137968, "gK_Tstbar_K_Tst.axonal": 0.089259, "gamma_CaDynamics_E2.axonal": 0.002910, "gNap_Et2bar_Nap_Et2.axonal": 0.006827, "gSK_E2bar_SK_E2.axonal": 0.007104, "gCa_HVAbar_Ca_HVA.axonal": 0.000990, "gK_Pstbar_K_Pst.axonal": 0.973538, "gSKv3_1bar_SKv3_1.axonal": 1.021945, "decay_CaDynamics_E2.axonal": 287.198731, "gCa_LVAstbar_Ca_LVAst.axonal": 0.008752, "gamma_CaDynamics_E2.somatic": 0.000609, "gSKv3_1bar_SKv3_1.somatic": 0.303472, "gSK_E2bar_SK_E2.somatic": 0.008407, "gCa_HVAbar_Ca_HVA.somatic": 0.000994, "gNaTs2_tbar_NaTs2_t.somatic": 0.983955, "decay_CaDynamics_E2.somatic": 210.485284, "gCa_LVAstbar_Ca_LVAst.somatic": 0.000333, } cell = l5pc_model.create(do_replace_axon=True) nrn_sim = ephys.simulators.NrnSimulator() > cell.instantiate_morphology_3d(nrn_sim) bluepyopt/tests/test_ephys/test_create_acc.py:750: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:250: in instantiate_morphology_3d self.instantiate_morphology(sim=sim) bluepyopt/ephys/models.py:241: in instantiate_morphology self.morphology.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = l5pc[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError During handling of the above exception, another exception occurred: @pytest.mark.unit def test_write_acc_l5pc(): L5PC_PATH = str( (pathlib.Path(__file__).parent / "../../../examples/l5pc").resolve() ) sys.path.insert(0, L5PC_PATH) ref_dir = (testdata_dir / "acc/l5pc").resolve() old_cwd = os.getcwd() try: import l5pc_model param_values = { "gNaTs2_tbar_NaTs2_t.apical": 0.026145, "gSKv3_1bar_SKv3_1.apical": 0.004226, "gImbar_Im.apical": 0.000143, "gNaTa_tbar_NaTa_t.axonal": 3.137968, "gK_Tstbar_K_Tst.axonal": 0.089259, "gamma_CaDynamics_E2.axonal": 0.002910, "gNap_Et2bar_Nap_Et2.axonal": 0.006827, "gSK_E2bar_SK_E2.axonal": 0.007104, "gCa_HVAbar_Ca_HVA.axonal": 0.000990, "gK_Pstbar_K_Pst.axonal": 0.973538, "gSKv3_1bar_SKv3_1.axonal": 1.021945, "decay_CaDynamics_E2.axonal": 287.198731, "gCa_LVAstbar_Ca_LVAst.axonal": 0.008752, "gamma_CaDynamics_E2.somatic": 0.000609, "gSKv3_1bar_SKv3_1.somatic": 0.303472, "gSK_E2bar_SK_E2.somatic": 0.008407, "gCa_HVAbar_Ca_HVA.somatic": 0.000994, "gNaTs2_tbar_NaTs2_t.somatic": 0.983955, "decay_CaDynamics_E2.somatic": 210.485284, "gCa_LVAstbar_Ca_LVAst.somatic": 0.000333, } cell = l5pc_model.create(do_replace_axon=True) nrn_sim = ephys.simulators.NrnSimulator() cell.instantiate_morphology_3d(nrn_sim) with tempfile.TemporaryDirectory() as test_dir: cell.write_acc( test_dir, param_values, # ext_catalogues=ext_catalogues, create_mod_morph=True, ) check_acc_dir(test_dir, ref_dir) except Exception as e: # fail with an older Arbor version > assert isinstance(e, NotImplementedError) E AssertionError: assert False E + where False = isinstance(TypeError('Not an iterable HocObject'), NotImplementedError) bluepyopt/tests/test_ephys/test_create_acc.py:762: AssertionError _________________________ test_CellEvaluator_evaluate __________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 204, in _run_func cell_model.instantiate(sim=sim) ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/models.py", line 256, in instantiate self.instantiate_morphology(sim) ~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/models.py", line 241, in instantiate_morphology self.morphology.instantiate(sim=sim, icell=self.icell) ~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/morphologies.py", line 158, in instantiate self.replace_axon(sim=sim, icell=icell) ~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/morphologies.py", line 178, in replace_axon nsec = len([sec for sec in icell.axonal]) ^^^^^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_CellEvaluator_evaluate(): """ephys.evaluators: Test CellEvaluator evaluate""" sim = ephys.simulators.NrnSimulator() simple_morph = ephys.morphologies.NrnFileMorphology( simple_morphology_path, do_replace_axon=True) all_loc = ephys.locations.NrnSeclistLocation('all', 'all') cm = ephys.parameters.NrnRangeParameter( name='cm', param_name='cm', bounds=[.5, 1.5], locations=[all_loc]) cell_model = ephys.models.CellModel('CellModel', morph=simple_morph, mechs=[], params=[cm]) soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.1, step_delay=100.0, step_duration=100, total_duration=200, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[rec_soma]) mean = -65 efeature = ephys.efeatures.eFELFeature(name='test_eFELFeature', efel_feature_name='voltage_base', recording_names={'': 'soma.v'}, stim_start=100.0, stim_end=200.0, exp_mean=-65, exp_std=1) s_obj = ephys.objectives.SingletonObjective( 'singleton', feature=efeature) fitness_calc = ephys.objectivescalculators.ObjectivesCalculator( objectives=[s_obj]) evaluator = ephys.evaluators.CellEvaluator( cell_model=cell_model, param_names=['cm'], fitness_calculator=fitness_calc, fitness_protocols={'sweep': protocol}, sim=sim) > responses = protocol.run(cell_model, {'cm': 1.0}, sim=sim) bluepyopt/tests/test_ephys/test_evaluators.py:113: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException _________________ TestNrnSeclistCompLocation.test_instantiate __________________ self = def test_instantiate(self): """ephys.locations.NrnSeclistCompLocation: test instantiate""" # Create a little test class with a soma and two dendritic sections class Cell(object): """Cell class""" pass cell = Cell() soma = self.sim.neuron.h.Section() dend1 = self.sim.neuron.h.Section(name="dend1") dend2 = self.sim.neuron.h.Section(name="dend2") cell.somatic = self.sim.neuron.h.SectionList() cell.somatic.append(soma) cell.basal = self.sim.neuron.h.SectionList() cell.basal.append(dend1) cell.basal.append(dend2) > soma_comp = self.loc.instantiate(sim=self.sim, icell=cell) bluepyopt/tests/test_ephys/test_locations.py:115: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0xffff66f14980> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError ____________ TestNrnTrunkSomaDistanceCompLocation.test_instantiate _____________ self = def test_instantiate(self): """ephys.locations.NrnSomaDistanceCompLocation: test instantiate""" # Create a little test class with a soma and two dendritic sections class Cell(object): """Cell class""" pass cell = Cell() soma = self.sim.neuron.h.Section(name="soma[0]") cell.soma = [soma] cell.testdend = self.sim.neuron.h.SectionList() dend1 = self.sim.neuron.h.Section(name="dend[0]") dend2 = self.sim.neuron.h.Section(name="dend[1]") dend3 = self.sim.neuron.h.Section(name="dend[2]") dend4 = self.sim.neuron.h.Section(name="dend[3]") dend5 = self.sim.neuron.h.Section(name="dend[4]") cell.testdend.append(sec=dend1) cell.testdend.append(sec=dend2) cell.testdend.append(sec=dend3) cell.testdend.append(sec=dend4) cell.testdend.append(sec=dend5) x0 = self.sim.neuron.h.Vector([0] * 10) d = self.sim.neuron.h.Vector([1] * 10) x1 = self.sim.neuron.h.Vector(np.linspace(0, 100, 10)) self.sim.neuron.h.pt3dadd(x0, x1, x0, d, sec=dend1) x2 = self.sim.neuron.h.Vector(np.linspace(100, 200, 10)) self.sim.neuron.h.pt3dadd(x0, x2, x0, d, sec=dend2) x3 = self.sim.neuron.h.Vector(np.linspace(200, 300, 10)) self.sim.neuron.h.pt3dadd(x0, x3, x0, d, sec=dend3) x4 = self.sim.neuron.h.Vector(np.linspace(300, 400, 10)) self.sim.neuron.h.pt3dadd(x0, x4, x0, d, sec=dend4) x5 = self.sim.neuron.h.Vector(np.linspace(400, 500, 10)) self.sim.neuron.h.pt3dadd(x0, x5, x0, d, sec=dend5) dend1.connect(soma(0.5), 0.0) dend2.connect(dend1(1.0), 0.0) dend3.connect(dend1(1.0), 0.0) dend4.connect(dend3(1.0), 0.0) dend5.connect(dend4(1.0), 0.0) > comp = self.loc.instantiate(sim=self.sim, icell=cell) bluepyopt/tests/test_ephys/test_locations.py:325: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/locations.py:537: in instantiate self.set_sec_index(icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = icell = .Cell object at 0xffff66a796a0> def set_sec_index(self, icell=None): """Search for the point furthest away along given direction.""" points = np.array( [ [ section.x3d(section.n3d() - 1), section.y3d(section.n3d() - 1), section.z3d(section.n3d() - 1), ] > for section in getattr(icell, self.seclist_name) ] ) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:521: TypeError ___________________________ test_nrnmod_instantiate ____________________________ @pytest.mark.unit def test_nrnmod_instantiate(): """ephys.mechanisms: Testing insert mechanism""" test_mech = ephys.mechanisms.NrnMODMechanism( 'test.pas', suffix='pas', locations=[simplecell.somatic_loc]) assert str(test_mech) == "test.pas: pas at ['somatic']" > simple_cell.instantiate(sim=sim) bluepyopt/tests/test_ephys/test_mechanisms.py:44: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:260: in instantiate mechanism.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/mechanisms.py:101: in instantiate for isec in isec_list: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ .0 = > return (isection for isection in isectionlist) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:243: TypeError ___________________________ test_nrnmod_determinism ____________________________ @pytest.mark.unit def test_nrnmod_determinism(): """ephys.mechanisms: Testing determinism""" test_mech = ephys.mechanisms.NrnMODMechanism( 'pas', suffix='pas', deterministic=False, locations=[simplecell.somatic_loc]) > simple_cell.instantiate(sim=sim) bluepyopt/tests/test_ephys/test_mechanisms.py:146: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:260: in instantiate mechanism.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/mechanisms.py:101: in instantiate for isec in isec_list: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ .0 = > return (isection for isection in isectionlist) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:243: TypeError __________________________ test_pprocess_instantiate ___________________________ @pytest.mark.unit def test_pprocess_instantiate(): """ephys.mechanisms: Testing insert point process""" test_pprocess = ephys.mechanisms.NrnMODPointProcessMechanism( name='expsyn', suffix='ExpSyn', locations=[simplecell.somacenter_loc]) assert ( str(test_pprocess) == "expsyn: ExpSyn at ['somatic[0](0.5)']") > simple_cell.instantiate(sim=sim) bluepyopt/tests/test_ephys/test_mechanisms.py:171: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:260: in instantiate mechanism.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/mechanisms.py:101: in instantiate for isec in isec_list: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ .0 = > return (isection for isection in isectionlist) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:243: TypeError _____________________ test_nrnfilemorphology_replace_axon ______________________ @pytest.mark.unit def test_nrnfilemorphology_replace_axon(): """ephys.morphologies: testing NrnFileMorphology replace_axon""" sim = ephys.simulators.NrnSimulator() morph = ephys.morphologies.NrnFileMorphology( simpleswc_morphpath, do_replace_axon=True) cell = ephys.models.CellModel(name='cell_replace') icell = cell.create_empty_cell( cell.name, sim=sim, seclist_names=cell.seclist_names, secarray_names=cell.secarray_names) > morph.instantiate(sim=sim, icell=icell) bluepyopt/tests/test_ephys/test_morphologies.py:69: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = cell_replace[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError ___________________ test_nrnfilemorphology_replace_axon_ax1 ____________________ @pytest.mark.unit def test_nrnfilemorphology_replace_axon_ax1(): """ephys.morphologies: testing NrnFileMorphology replace_axon with ax1""" sim = ephys.simulators.NrnSimulator() morph = ephys.morphologies.NrnFileMorphology( simpleswc_ax1_morphpath, do_replace_axon=True) cell = ephys.models.CellModel(name='cell_ax1') icell = cell.create_empty_cell( cell.name, sim=sim, seclist_names=cell.seclist_names, secarray_names=cell.secarray_names) > morph.instantiate(sim=sim, icell=icell) bluepyopt/tests/test_ephys/test_morphologies.py:93: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = cell_ax1[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError ___________________ test_nrnfilemorphology_replace_axon_ax2 ____________________ @pytest.mark.unit def test_nrnfilemorphology_replace_axon_ax2(): """ephys.morphologies: testing NrnFileMorphology replace_axon with ax2""" sim = ephys.simulators.NrnSimulator() morph = ephys.morphologies.NrnFileMorphology( simpleswc_ax2_morphpath, do_replace_axon=True) cell = ephys.models.CellModel(name='cell_ax2') icell = cell.create_empty_cell( cell.name, sim=sim, seclist_names=cell.seclist_names, secarray_names=cell.secarray_names) > morph.instantiate(sim=sim, icell=icell) bluepyopt/tests/test_ephys/test_morphologies.py:117: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = cell_ax2[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError ________________________ test_pprocessparam_instantiate ________________________ @pytest.mark.unit def test_pprocessparam_instantiate(): """ephys.parameters: Testing point process parameter""" simplecell = bluepyopt.ephys.examples.simplecell.SimpleCell() simple_cell = simplecell.cell_model simple_cell.freeze(simplecell.default_param_values) sim = simplecell.nrn_sim expsyn_mech = ephys.mechanisms.NrnMODPointProcessMechanism( name='expsyn', suffix='ExpSyn', locations=[simplecell.somacenter_loc]) expsyn_loc = ephys.locations.NrnPointProcessLocation( 'expsyn_loc', pprocess_mech=expsyn_mech) expsyn_tau_param = ephys.parameters.NrnPointProcessParameter( name='expsyn_tau', param_name='tau', value=2, locations=[expsyn_loc]) simple_cell.mechanisms.append(expsyn_mech) simple_cell.params[expsyn_tau_param.name] = expsyn_tau_param > simple_cell.instantiate(sim=sim) bluepyopt/tests/test_ephys/test_parameters.py:42: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:260: in instantiate mechanism.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/mechanisms.py:101: in instantiate for isec in isec_list: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ .0 = > return (isection for isection in isectionlist) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:243: TypeError ____________________________ test_distloc_exception ____________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 206, in _run_func self.instantiate(sim=sim, cell_model=cell_model) ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 314, in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/stimuli.py", line 258, in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/locations.py", line 98, in instantiate iseclist_size = len([x for x in iseclist]) ^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_distloc_exception(): """ephys.protocols: test if protocol raise dist loc exception""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() # icell = dummy_cell.instantiate(sim=nrn_sim) soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) dend_loc = ephys.locations.NrnSomaDistanceCompLocation( name='dend_loc', soma_distance=800, seclist_name='apical') rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') rec_dend = ephys.recordings.CompRecording( name='dend.v', location=dend_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[ rec_soma, rec_dend]) > responses = protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim) bluepyopt/tests/test_ephys/test_protocols.py:71: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException __________________________ test_sequenceprotocol_run ___________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 206, in _run_func self.instantiate(sim=sim, cell_model=cell_model) ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 314, in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/stimuli.py", line 258, in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/locations.py", line 98, in instantiate iseclist_size = len([x for x in iseclist]) ^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_sequenceprotocol_run(): """ephys.protocols: Test SequenceProtocol run""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() # icell = dummy_cell.instantiate(sim=nrn_sim) soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) sweep_protocol = ephys.protocols.SweepProtocol( name='sweep_prot', stimuli=[stim], recordings=[rec_soma]) seq_protocol = ephys.protocols.SequenceProtocol( name='seq_prot', protocols=[sweep_protocol]) > responses = seq_protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim) bluepyopt/tests/test_ephys/test_protocols.py:221: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:89: in run response = protocol.run( bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException ______________________ test_sweepprotocol_run_unisolated _______________________ self = cell_model = param_values = {} sim = def _run_func(self, cell_model, param_values, sim=None): """Run protocols""" try: cell_model.freeze(param_values) cell_model.instantiate(sim=sim) > self.instantiate(sim=sim, cell_model=cell_model) bluepyopt/ephys/protocols.py:206: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:314: in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) bluepyopt/ephys/stimuli.py:258: in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0xffff66784830> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError The above exception was the direct cause of the following exception: @pytest.mark.unit def test_sweepprotocol_run_unisolated(): """ephys.protocols: Test SweepProtocol unisolated run""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() # icell = dummy_cell.instantiate(sim=nrn_sim) soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) unknown_loc = ephys.locations.NrnSomaDistanceCompLocation( name='unknown_loc', seclist_name='somatic', soma_distance=100) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') rec_unknown = ephys.recordings.CompRecording( name='unknown.v', location=unknown_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[rec_soma, rec_unknown]) > responses = protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim, isolate=False) bluepyopt/tests/test_ephys/test_protocols.py:354: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:302: in run responses = self._run_func(cell_model=cell_model, _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = cell_model = param_values = {} sim = def _run_func(self, cell_model, param_values, sim=None): """Run protocols""" try: cell_model.freeze(param_values) cell_model.instantiate(sim=sim) self.instantiate(sim=sim, cell_model=cell_model) try: if isinstance(sim, LFPySimulator): sim.run( lfpy_cell=cell_model.lfpy_cell, lfpy_electrode=cell_model.lfpy_electrode, tstop=self.total_duration, cvode_active=self.cvode_active) else: sim.run( self.total_duration, cvode_active=self.cvode_active ) except (RuntimeError, simulators.NrnSimulatorException): logger.debug( 'SweepProtocol: Running of parameter set {%s} generated ' 'an exception, returning None in responses', str(param_values)) responses = {recording.name: None for recording in self.recordings} else: responses = { recording.name: recording.response for recording in self.recordings} self.destroy(sim=sim) cell_model.destroy(sim=sim) cell_model.unfreeze(param_values.keys()) return responses except BaseException as e: > raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol bluepyopt/ephys/protocols.py:239: SweepProtocolException _______________________ test_sweepprotocol_run_isolated ________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 206, in _run_func self.instantiate(sim=sim, cell_model=cell_model) ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 314, in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/stimuli.py", line 258, in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/locations.py", line 98, in instantiate iseclist_size = len([x for x in iseclist]) ^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_sweepprotocol_run_isolated(): """ephys.protocols: Test SweepProtocol isolated run""" nrn_sim = ephys.simulators.NrnSimulator(dt=0.1) dummy_cell = dummycells.DummyCellModel1() soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) unknown_loc = ephys.locations.NrnSomaDistanceCompLocation( name='unknown_loc', seclist_name='somatic', soma_distance=100) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') rec_unknown = ephys.recordings.CompRecording( name='unknown.v', location=unknown_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[rec_soma, rec_unknown]) > responses = protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim, isolate=True) bluepyopt/tests/test_ephys/test_protocols.py:405: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException _________________________ test_nrnsimulator_exception __________________________ self = cell_model = param_values = {} sim = def _run_func(self, cell_model, param_values, sim=None): """Run protocols""" try: cell_model.freeze(param_values) cell_model.instantiate(sim=sim) > self.instantiate(sim=sim, cell_model=cell_model) bluepyopt/ephys/protocols.py:206: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:314: in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) bluepyopt/ephys/stimuli.py:258: in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0xffff66a79a90> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError The above exception was the direct cause of the following exception: @pytest.mark.unit def test_nrnsimulator_exception(): """ephys.protocols: test if protocol raise nrn sim exception""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[rec_soma]) nrn_sim.run = run_RuntimeError > responses = protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim, isolate=False) bluepyopt/tests/test_ephys/test_protocols.py:450: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:302: in run responses = self._run_func(cell_model=cell_model, _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = cell_model = param_values = {} sim = def _run_func(self, cell_model, param_values, sim=None): """Run protocols""" try: cell_model.freeze(param_values) cell_model.instantiate(sim=sim) self.instantiate(sim=sim, cell_model=cell_model) try: if isinstance(sim, LFPySimulator): sim.run( lfpy_cell=cell_model.lfpy_cell, lfpy_electrode=cell_model.lfpy_electrode, tstop=self.total_duration, cvode_active=self.cvode_active) else: sim.run( self.total_duration, cvode_active=self.cvode_active ) except (RuntimeError, simulators.NrnSimulatorException): logger.debug( 'SweepProtocol: Running of parameter set {%s} generated ' 'an exception, returning None in responses', str(param_values)) responses = {recording.name: None for recording in self.recordings} else: responses = { recording.name: recording.response for recording in self.recordings} self.destroy(sim=sim) cell_model.destroy(sim=sim) cell_model.unfreeze(param_values.keys()) return responses except BaseException as e: > raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol bluepyopt/ephys/protocols.py:239: SweepProtocolException _______________________ test_nrnsimulator_cvode_minstep ________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 204, in _run_func cell_model.instantiate(sim=sim) ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/models.py", line 260, in instantiate mechanism.instantiate(sim=sim, icell=self.icell) ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/mechanisms.py", line 101, in instantiate for isec in isec_list: ^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/locations.py", line 243, in return (isection for isection in isectionlist) ^^^^^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_nrnsimulator_cvode_minstep(): """ephys.simulators: test if NrnSimulator constructor works""" # Check with minstep specified neuron_sim = ephys.simulators.NrnSimulator() assert neuron_sim.cvode.minstep() == 0.0 assert neuron_sim.cvode_minstep == 0.0 # Check default minstep before and after run neuron_sim = ephys.simulators.NrnSimulator(cvode_minstep=0.01) assert neuron_sim.cvode.minstep() == 0.0 neuron_sim.run(tstop=10) assert neuron_sim.cvode.minstep() == 0.0 # Check with that minstep is set back to the original value after run neuron_sim = ephys.simulators.NrnSimulator(cvode_minstep=0.0) neuron_sim.cvode_minstep = 0.05 assert neuron_sim.cvode.minstep() == 0.05 neuron_sim.run(tstop=10) assert neuron_sim.cvode.minstep() == 0.05 # Check that the minstep is effective cvode_minstep = 0.012 params = { "gnabar_hh": 0.10299326453483033, "gkbar_hh": 0.027124836082684685, } simplecell = examples.simplecell.SimpleCell() evaluator = simplecell.cell_evaluator evaluator.cell_model.unfreeze(params.keys()) evaluator.sim = ephys.simulators.NrnSimulator(cvode_minstep=cvode_minstep) > responses = evaluator.run_protocols( protocols=evaluator.fitness_protocols.values(), param_values=params ) bluepyopt/tests/test_ephys/test_simulators.py:92: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/evaluators.py:177: in run_protocols responses.update(self.run_protocol( bluepyopt/ephys/evaluators.py:155: in run_protocol return protocol.run( bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException _____________________ test_NrnNetStimStimulus_instantiate ______________________ @pytest.mark.unit def test_NrnNetStimStimulus_instantiate(): """ephys.stimuli: test if NrnNetStimStimulus instantiate works""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() icell = dummy_cell.instantiate(sim=nrn_sim) somacenter_loc = ephys.locations.NrnSeclistCompLocation( name=None, seclist_name='somatic', sec_index=0, comp_x=.5) expsyn_mech = ephys.mechanisms.NrnMODPointProcessMechanism( name='expsyn', suffix='ExpSyn', locations=[somacenter_loc]) > expsyn_mech.instantiate(sim=nrn_sim, icell=icell) bluepyopt/tests/test_ephys/test_stimuli.py:73: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/mechanisms.py:308: in instantiate icomp = location.instantiate(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0xffff66784ec0> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError ___________________ test_NrnCurrentPlayStimulus_instantiate ____________________ @pytest.mark.unit def test_NrnCurrentPlayStimulus_instantiate(): """ephys.stimuli: test if NrnNetStimStimulus instantiate works""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() icell = dummy_cell.instantiate(sim=nrn_sim) somacenter_loc = ephys.locations.NrnSeclistCompLocation( name=None, seclist_name='somatic', sec_index=0, comp_x=.5) time_points = [10, 50] current_points = [0.1, 0.2] current_stim = ephys.stimuli.NrnCurrentPlayStimulus( time_points=time_points, current_points=current_points, location=somacenter_loc) assert current_stim.time_points == time_points assert current_stim.current_points == current_points assert str(current_stim) == 'Current play at somatic[0](0.5)' > current_stim.instantiate(sim=nrn_sim, icell=icell) bluepyopt/tests/test_ephys/test_stimuli.py:120: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/stimuli.py:88: in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0xffff66a79a90> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError =============================== warnings summary =============================== bluepyopt/tests/test_deapext/test_hype.py::test_hypeIndicatorExact /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/deapext/hype.py:71: RuntimeWarning: divide by zero encountered in divide alpha.append(numpy.prod((k - j) / (Ps - j) / i)) bluepyopt/tests/test_deapext/test_hype.py::test_hypeIndicatorSampled /builddir/build/BUILD/python-bluepyopt-1.14.11-build/BluePyOpt-43d63a88c0c9fc5b33cd69d6c5ce0db77f6dea1e/bluepyopt/deapext/hype.py:101: RuntimeWarning: divide by zero encountered in divide alpha.append(numpy.prod((k - j) / (nrP - j) / i)) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ FAILED bluepyopt/tests/test_ephys/test_create_acc.py::test_cell_model_write_and_read_acc_replace_axon FAILED bluepyopt/tests/test_ephys/test_create_acc.py::test_write_acc_simple FAILED bluepyopt/tests/test_ephys/test_create_acc.py::test_write_acc_l5pc - A... FAILED bluepyopt/tests/test_ephys/test_evaluators.py::test_CellEvaluator_evaluate FAILED bluepyopt/tests/test_ephys/test_locations.py::TestNrnSeclistCompLocation::test_instantiate FAILED bluepyopt/tests/test_ephys/test_locations.py::TestNrnTrunkSomaDistanceCompLocation::test_instantiate FAILED bluepyopt/tests/test_ephys/test_mechanisms.py::test_nrnmod_instantiate FAILED bluepyopt/tests/test_ephys/test_mechanisms.py::test_nrnmod_determinism FAILED bluepyopt/tests/test_ephys/test_mechanisms.py::test_pprocess_instantiate FAILED bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon FAILED bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon_ax1 FAILED bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon_ax2 FAILED bluepyopt/tests/test_ephys/test_parameters.py::test_pprocessparam_instantiate FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_distloc_exception FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_sequenceprotocol_run FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_sweepprotocol_run_unisolated FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_sweepprotocol_run_isolated FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_nrnsimulator_exception FAILED bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsimulator_cvode_minstep FAILED bluepyopt/tests/test_ephys/test_stimuli.py::test_NrnNetStimStimulus_instantiate FAILED bluepyopt/tests/test_ephys/test_stimuli.py::test_NrnCurrentPlayStimulus_instantiate ========== 21 failed, 142 passed, 20 deselected, 2 warnings in 8.03s =========== error: Bad exit status from /var/tmp/rpm-tmp.tLxoEO (%check) Bad exit status from /var/tmp/rpm-tmp.tLxoEO (%check) RPM build errors: Child return code was: 1 EXCEPTION: [Error('Command failed: \n # /usr/bin/systemd-nspawn -q -M e4a4708b693d4a1ea2904e6e427fdf46 -D /var/lib/mock/f42-build-56217872-6541701/root -a -u mockbuild --capability=cap_ipc_lock --bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin \'--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"\' \'--setenv=PS1= \\s-\\v\\$ \' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c \'/usr/bin/rpmbuild -ba --noprep --noclean --target aarch64 /builddir/build/SPECS/python-bluepyopt.spec\'\n', 1)] Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/mockbuild/trace_decorator.py", line 93, in trace result = func(*args, **kw) File "/usr/lib/python3.13/site-packages/mockbuild/util.py", line 610, in do_with_status raise exception.Error("Command failed: \n # %s\n%s" % (cmd_pretty(command, env), output), child.returncode) mockbuild.exception.Error: Command failed: # /usr/bin/systemd-nspawn -q -M e4a4708b693d4a1ea2904e6e427fdf46 -D /var/lib/mock/f42-build-56217872-6541701/root -a -u mockbuild --capability=cap_ipc_lock --bind=/tmp/mock-resolv.wdsxlu9r:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin '--setenv=PROMPT_COMMAND=printf "\033]0;\007"' '--setenv=PS1= \s-\v\$ ' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c '/usr/bin/rpmbuild -ba --noprep --noclean --target aarch64 /builddir/build/SPECS/python-bluepyopt.spec'