Mock Version: 5.5 Mock Version: 5.5 Mock Version: 5.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pynn.spec'], chrootPath='/var/lib/mock/f39-build-50563984-6053015/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.tiwi3i3h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.tiwi3i3h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '8f33308cb1e947b4816d8fadce3d0c70', '-D', '/var/lib/mock/f39-build-50563984-6053015/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.tiwi3i3h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pynn.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1708905600 Wrote: /builddir/build/SRPMS/python-pynn-0.12.2-2.fc39.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pynn.spec'], chrootPath='/var/lib/mock/f39-build-50563984-6053015/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.tiwi3i3h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.tiwi3i3h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '0db279cffaa34cda8916b77766fc67e3', '-D', '/var/lib/mock/f39-build-50563984-6053015/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.tiwi3i3h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pynn.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1708905600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.kG8iGR + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf PyNN-0.12.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/PyNN-0.12.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd PyNN-0.12.2 + rm -rf /builddir/build/BUILD/PyNN-0.12.2-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/PyNN-0.12.2-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'python-pynn-0.12.2 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + rm -rfv PyNN-0.12.2/pyNN.egg-info + sed -i 's|\${NEST_LIBDIR}/nest|\${NEST_LIBDIR}|' pyNN/nest/extensions/CMakeLists.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.P7gZ44 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd PyNN-0.12.2 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' /usr/lib/python3.12/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. config = read_configuration(filepath, True, ignore_option_errors, dist) running build running build_py creating build creating build/lib creating build/lib/pyNN copying pyNN/__init__.py -> build/lib/pyNN copying pyNN/connectors.py -> build/lib/pyNN copying pyNN/core.py -> build/lib/pyNN copying pyNN/errors.py -> build/lib/pyNN copying pyNN/models.py -> build/lib/pyNN copying pyNN/morphology.py -> build/lib/pyNN copying pyNN/multisim.py -> build/lib/pyNN copying pyNN/network.py -> build/lib/pyNN copying pyNN/parameters.py -> build/lib/pyNN copying pyNN/random.py -> build/lib/pyNN copying pyNN/space.py -> build/lib/pyNN copying pyNN/spiNNaker.py -> build/lib/pyNN creating build/lib/pyNN/arbor copying pyNN/arbor/__init__.py -> build/lib/pyNN/arbor copying pyNN/arbor/cells.py -> build/lib/pyNN/arbor copying pyNN/arbor/control.py -> build/lib/pyNN/arbor copying pyNN/arbor/morphology.py -> build/lib/pyNN/arbor copying pyNN/arbor/populations.py -> build/lib/pyNN/arbor copying pyNN/arbor/procedural_api.py -> build/lib/pyNN/arbor copying pyNN/arbor/projections.py -> build/lib/pyNN/arbor copying pyNN/arbor/recording.py -> build/lib/pyNN/arbor copying pyNN/arbor/simulator.py -> build/lib/pyNN/arbor copying pyNN/arbor/standardmodels.py -> build/lib/pyNN/arbor creating build/lib/pyNN/brian2 copying pyNN/brian2/__init__.py -> build/lib/pyNN/brian2 copying pyNN/brian2/cells.py -> build/lib/pyNN/brian2 copying pyNN/brian2/control.py -> build/lib/pyNN/brian2 copying pyNN/brian2/populations.py -> build/lib/pyNN/brian2 copying pyNN/brian2/procedural_api.py -> build/lib/pyNN/brian2 copying pyNN/brian2/projections.py -> build/lib/pyNN/brian2 copying pyNN/brian2/recording.py -> build/lib/pyNN/brian2 copying pyNN/brian2/simulator.py -> build/lib/pyNN/brian2 creating build/lib/pyNN/common copying pyNN/common/__init__.py -> build/lib/pyNN/common copying pyNN/common/control.py -> build/lib/pyNN/common copying pyNN/common/populations.py -> build/lib/pyNN/common copying pyNN/common/procedural_api.py -> build/lib/pyNN/common copying pyNN/common/projections.py -> build/lib/pyNN/common creating build/lib/pyNN/descriptions copying pyNN/descriptions/__init__.py -> build/lib/pyNN/descriptions creating build/lib/pyNN/hardware copying pyNN/hardware/__init__.py -> build/lib/pyNN/hardware copying pyNN/hardware/auxiliary.py -> build/lib/pyNN/hardware creating build/lib/pyNN/mock copying pyNN/mock/__init__.py -> build/lib/pyNN/mock copying pyNN/mock/control.py -> build/lib/pyNN/mock copying pyNN/mock/populations.py -> build/lib/pyNN/mock copying pyNN/mock/procedural_api.py -> build/lib/pyNN/mock copying pyNN/mock/projections.py -> build/lib/pyNN/mock copying pyNN/mock/recording.py -> build/lib/pyNN/mock copying pyNN/mock/simulator.py -> build/lib/pyNN/mock copying pyNN/mock/standardmodels.py -> build/lib/pyNN/mock creating build/lib/pyNN/nest copying pyNN/nest/__init__.py -> build/lib/pyNN/nest copying pyNN/nest/cells.py -> build/lib/pyNN/nest copying pyNN/nest/connectors.py -> build/lib/pyNN/nest copying pyNN/nest/control.py -> build/lib/pyNN/nest copying pyNN/nest/conversion.py -> build/lib/pyNN/nest copying pyNN/nest/electrodes.py -> build/lib/pyNN/nest copying pyNN/nest/nineml.py -> build/lib/pyNN/nest copying pyNN/nest/populations.py -> build/lib/pyNN/nest copying pyNN/nest/procedural_api.py -> build/lib/pyNN/nest copying pyNN/nest/projections.py -> build/lib/pyNN/nest copying pyNN/nest/random.py -> build/lib/pyNN/nest copying pyNN/nest/recording.py -> build/lib/pyNN/nest copying pyNN/nest/simulator.py -> build/lib/pyNN/nest copying pyNN/nest/synapses.py -> build/lib/pyNN/nest creating build/lib/pyNN/neuroml copying pyNN/neuroml/__init__.py -> build/lib/pyNN/neuroml copying pyNN/neuroml/populations.py -> build/lib/pyNN/neuroml copying pyNN/neuroml/projections.py -> build/lib/pyNN/neuroml copying pyNN/neuroml/recording.py -> build/lib/pyNN/neuroml copying pyNN/neuroml/simulator.py -> build/lib/pyNN/neuroml creating build/lib/pyNN/neuron copying pyNN/neuron/__init__.py -> build/lib/pyNN/neuron copying pyNN/neuron/cells.py -> build/lib/pyNN/neuron copying pyNN/neuron/connectors.py -> build/lib/pyNN/neuron copying pyNN/neuron/control.py -> build/lib/pyNN/neuron copying pyNN/neuron/morphology.py -> build/lib/pyNN/neuron copying pyNN/neuron/neuroml.py -> build/lib/pyNN/neuron copying pyNN/neuron/nineml.py -> build/lib/pyNN/neuron copying pyNN/neuron/populations.py -> build/lib/pyNN/neuron copying pyNN/neuron/procedural_api.py -> build/lib/pyNN/neuron copying pyNN/neuron/projections.py -> build/lib/pyNN/neuron copying pyNN/neuron/random.py -> build/lib/pyNN/neuron copying pyNN/neuron/recording.py -> build/lib/pyNN/neuron copying pyNN/neuron/simulator.py -> build/lib/pyNN/neuron creating build/lib/pyNN/nineml copying pyNN/nineml/__init__.py -> build/lib/pyNN/nineml copying pyNN/nineml/cells.py -> build/lib/pyNN/nineml copying pyNN/nineml/connectors.py -> build/lib/pyNN/nineml copying pyNN/nineml/populations.py -> build/lib/pyNN/nineml copying pyNN/nineml/projections.py -> build/lib/pyNN/nineml copying pyNN/nineml/read.py -> build/lib/pyNN/nineml copying pyNN/nineml/recording.py -> build/lib/pyNN/nineml copying pyNN/nineml/simulator.py -> build/lib/pyNN/nineml copying pyNN/nineml/standardmodels.py -> build/lib/pyNN/nineml copying pyNN/nineml/synapses.py -> build/lib/pyNN/nineml copying pyNN/nineml/utility.py -> build/lib/pyNN/nineml creating build/lib/pyNN/recording copying pyNN/recording/__init__.py -> build/lib/pyNN/recording copying pyNN/recording/files.py -> build/lib/pyNN/recording creating build/lib/pyNN/serialization copying pyNN/serialization/__init__.py -> build/lib/pyNN/serialization copying pyNN/serialization/sonata.py -> build/lib/pyNN/serialization creating build/lib/pyNN/standardmodels copying pyNN/standardmodels/__init__.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/base.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/cells.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/electrodes.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/ion_channels.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/receptors.py -> build/lib/pyNN/standardmodels copying pyNN/standardmodels/synapses.py -> build/lib/pyNN/standardmodels creating build/lib/pyNN/utility copying pyNN/utility/__init__.py -> build/lib/pyNN/utility copying pyNN/utility/build.py -> build/lib/pyNN/utility copying pyNN/utility/plotting.py -> build/lib/pyNN/utility copying pyNN/utility/progress_bar.py -> build/lib/pyNN/utility copying pyNN/utility/script_tools.py -> build/lib/pyNN/utility copying pyNN/utility/timer.py -> build/lib/pyNN/utility creating build/lib/pyNN/brian2/standardmodels copying pyNN/brian2/standardmodels/__init__.py -> build/lib/pyNN/brian2/standardmodels copying pyNN/brian2/standardmodels/cells.py -> build/lib/pyNN/brian2/standardmodels copying pyNN/brian2/standardmodels/electrodes.py -> build/lib/pyNN/brian2/standardmodels copying pyNN/brian2/standardmodels/receptors.py -> build/lib/pyNN/brian2/standardmodels copying pyNN/brian2/standardmodels/synapses.py -> build/lib/pyNN/brian2/standardmodels creating build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/__init__.py -> build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/cells.py -> build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/electrodes.py -> build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/receptors.py -> build/lib/pyNN/nest/standardmodels copying pyNN/nest/standardmodels/synapses.py -> build/lib/pyNN/nest/standardmodels creating build/lib/pyNN/neuroml/standardmodels copying pyNN/neuroml/standardmodels/__init__.py -> build/lib/pyNN/neuroml/standardmodels copying pyNN/neuroml/standardmodels/cells.py -> build/lib/pyNN/neuroml/standardmodels copying pyNN/neuroml/standardmodels/electrodes.py -> build/lib/pyNN/neuroml/standardmodels copying pyNN/neuroml/standardmodels/synapses.py -> build/lib/pyNN/neuroml/standardmodels creating build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/__init__.py -> build/lib/pyNN/neuron/nmodl creating build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/__init__.py -> build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/cells.py -> build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/electrodes.py -> build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/ion_channels.py -> build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/receptors.py -> build/lib/pyNN/neuron/standardmodels copying pyNN/neuron/standardmodels/synapses.py -> build/lib/pyNN/neuron/standardmodels running egg_info creating PyNN.egg-info writing PyNN.egg-info/PKG-INFO writing dependency_links to PyNN.egg-info/dependency_links.txt writing requirements to PyNN.egg-info/requires.txt writing top-level names to PyNN.egg-info/top_level.txt writing manifest file 'PyNN.egg-info/SOURCES.txt' reading manifest file 'PyNN.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'requirements.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'PyNN.egg-info/SOURCES.txt' creating build/lib/pyNN/arbor/nmodl copying pyNN/arbor/nmodl/expsyn.mod -> build/lib/pyNN/arbor/nmodl copying pyNN/arbor/nmodl/kdr.mod -> build/lib/pyNN/arbor/nmodl copying pyNN/arbor/nmodl/leak.mod -> build/lib/pyNN/arbor/nmodl copying pyNN/arbor/nmodl/na.mod -> build/lib/pyNN/arbor/nmodl copying pyNN/arbor/nmodl/pas.mod -> build/lib/pyNN/arbor/nmodl copying pyNN/arbor/nmodl/pas2.mod -> build/lib/pyNN/arbor/nmodl creating build/lib/pyNN/descriptions/templates creating build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/assembly_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/modeltype_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/population_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/populationview_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/projection_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/structure_default.txt -> build/lib/pyNN/descriptions/templates/cheetah copying pyNN/descriptions/templates/cheetah/synapsedynamics_default.txt -> build/lib/pyNN/descriptions/templates/cheetah creating build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/assembly_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/modeltype_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/population_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/populationview_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/projection_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/structure_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 copying pyNN/descriptions/templates/jinja2/synapsedynamics_default.txt -> build/lib/pyNN/descriptions/templates/jinja2 creating build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/assembly_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/modeltype_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/population_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/populationview_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/projection_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/structure_default.txt -> build/lib/pyNN/descriptions/templates/string copying pyNN/descriptions/templates/string/synapsedynamics_default.txt -> build/lib/pyNN/descriptions/templates/string creating build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/CMakeLists.txt -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/pynn_extensions.cpp -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/pynn_extensions.h -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/simple_stochastic_synapse.h -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/stochastic_stp_synapse.h -> build/lib/pyNN/nest/extensions copying pyNN/nest/extensions/stochastic_stp_synapse_impl.h -> build/lib/pyNN/nest/extensions creating build/lib/pyNN/nest/extensions/sli copying pyNN/nest/extensions/sli/pynn_extensions-init.sli -> build/lib/pyNN/nest/extensions/sli copying pyNN/neuron/nmodl/adexp.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/alphaisyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/alphasyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/expisyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/gammastim.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/gap.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/gif.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/gsfa_grr.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/hh_traub.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/izhikevich.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/netstim2.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/poisson_stim_refractory.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/quantal_stp.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/refrac.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/reset.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_guetig.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_softlimits.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_songabbott.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_symm.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stdwa_vogels2011.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stochastic_synapse.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/stochastic_tsodyksmarkram.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/tmgsyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/tmisyn.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/tsodyksmarkram.mod -> build/lib/pyNN/neuron/nmodl copying pyNN/neuron/nmodl/vecstim.mod -> build/lib/pyNN/neuron/nmodl + pushd ./build/lib/pyNN/neuron/nmodl/ ~/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl ~/build/BUILD/PyNN-0.12.2 + nrnivmodl . /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl Mod files: "././adexp.mod" "././alphaisyn.mod" "././alphasyn.mod" "././expisyn.mod" "././gammastim.mod" "././gap.mod" "././gif.mod" "././gsfa_grr.mod" "././hh_traub.mod" "././izhikevich.mod" "././netstim2.mod" "././poisson_stim_refractory.mod" "././quantal_stp.mod" "././refrac.mod" "././reset.mod" "././stdwa_guetig.mod" "././stdwa_softlimits.mod" "././stdwa_songabbott.mod" "././stdwa_symm.mod" "././stdwa_vogels2011.mod" "././stochastic_synapse.mod" "././stochastic_tsodyksmarkram.mod" "././tmgsyn.mod" "././tmisyn.mod" "././tsodyksmarkram.mod" "././vecstim.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL .././adexp.mod -> NMODL .././alphaisyn.mod -> NMODL .././alphasyn.mod Translating alphasyn.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/alphasyn.c Translating adexp.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/adexp.c Translating alphaisyn.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/alphaisyn.c Thread Safe Thread Safe Thread Safe -> NMODL .././expisyn.mod -> NMODL .././gammastim.mod -> NMODL .././gap.mod Translating expisyn.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/expisyn.c Translating gammastim.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/gammastim.c Notice: set_seed is not thread safe Notice: normrand is not thread safe Notice: scop_random is not thread safe Notice: normrand is not thread safe Notice: scop_random is not thread safe Notice: scop_random is not thread safe Thread Safe Translating gap.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/gap.c Thread Safe -> NMODL .././gif.mod -> NMODL .././gsfa_grr.mod -> NMODL .././hh_traub.mod Translating gif.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/gif.c Notice: Use of POINTER is not thread safe. Translating gsfa_grr.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/gsfa_grr.c Notice: VERBATIM blocks are not thread safe Translating hh_traub.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/hh_traub.c Notice: scop_random is not thread safe Warning: value undefined. (declared within VERBATIM?) Thread Safe Thread Safe -> NMODL .././izhikevich.mod -> NMODL .././netstim2.mod -> NMODL .././poisson_stim_refractory.mod Translating netstim2.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/netstim2.c Translating izhikevich.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/izhikevich.c Translating poisson_stim_refractory.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/poisson_stim_refractory.c Notice: set_seed is not thread safe Notice: exprand is not thread safe Thread Safe Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it only affects and is affected by discrete events. As such it is not located in a section and is not associated with an integrator Thread Safe -> NMODL .././quantal_stp.mod -> NMODL .././refrac.mod -> NMODL .././reset.mod Translating quantal_stp.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/quantal_stp.c Notice: Use of POINTER is not thread safe. Notice: VERBATIM blocks are not thread safe Translating refrac.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/refrac.c Notice: scop_random is not thread safe Warning: value undefined. (declared within VERBATIM?) Translating reset.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/reset.c Thread Safe Thread Safe -> NMODL .././stdwa_guetig.mod -> NMODL .././stdwa_softlimits.mod -> NMODL .././stdwa_songabbott.mod Translating stdwa_guetig.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/stdwa_guetig.c Notice: Use of POINTER is not thread safe. Translating stdwa_softlimits.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/stdwa_softlimits.c Notice: Use of POINTER is not thread safe. Translating stdwa_songabbott.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/stdwa_songabbott.c Notice: Use of POINTER is not thread safe. -> NMODL .././stdwa_symm.mod -> NMODL .././stdwa_vogels2011.mod -> NMODL .././stochastic_synapse.mod Translating stdwa_symm.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/stdwa_symm.c Notice: Use of POINTER is not thread safe. -> NMODL .././stochastic_tsodyksmarkram.mod Translating stdwa_vogels2011.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/stdwa_vogels2011.c Notice: Use of POINTER is not thread safe. Translating stochastic_synapse.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/stochastic_synapse.c Notice: Use of POINTER is not thread safe. Notice: VERBATIM blocks are not thread safe Notice: scop_random is not thread safe Warning: value undefined. (declared within VERBATIM?) -> NMODL .././tmgsyn.mod -> NMODL .././tmisyn.mod Translating stochastic_tsodyksmarkram.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/stochastic_tsodyksmarkram.c -> NMODL .././tsodyksmarkram.mod Notice: Use of POINTER is not thread safe. Notice: VERBATIM blocks are not thread safe Notice: scop_random is not thread safe Warning: value undefined. (declared within VERBATIM?) Translating tmgsyn.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/tmgsyn.c Translating tmisyn.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/tmisyn.c -> NMODL .././vecstim.mod Translating tsodyksmarkram.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/tsodyksmarkram.c Notice: Use of POINTER is not thread safe. Thread Safe Thread Safe -> Compiling adexp.c -> Compiling alphaisyn.c -> Compiling alphasyn.c Translating vecstim.mod into /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/neuron/nmodl/x86_64/vecstim.c Notice: VERBATIM blocks are not thread safe -> Compiling expisyn.c -> Compiling gammastim.c -> Compiling gap.c -> Compiling gif.c -> Compiling gsfa_grr.c -> Compiling hh_traub.c -> Compiling izhikevich.c -> Compiling netstim2.c -> Compiling poisson_stim_refractory.c -> Compiling quantal_stp.c -> Compiling refrac.c -> Compiling reset.c -> Compiling stdwa_guetig.c -> Compiling stdwa_softlimits.c -> Compiling stdwa_songabbott.c -> Compiling stdwa_symm.c -> Compiling stdwa_vogels2011.c -> Compiling stochastic_synapse.c -> Compiling stochastic_tsodyksmarkram.c -> Compiling tmgsyn.c -> Compiling tmisyn.c -> Compiling tsodyksmarkram.c -> Compiling vecstim.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.12 -lX11 -lXext Successfully created x86_64/special + popd ~/build/BUILD/PyNN-0.12.2 ~/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl ~/build/BUILD/PyNN-0.12.2 + pushd pyNN/neuron/nmodl + nrnivmodl . /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl Mod files: "././adexp.mod" "././alphaisyn.mod" "././alphasyn.mod" "././expisyn.mod" "././gammastim.mod" "././gap.mod" "././gif.mod" "././gsfa_grr.mod" "././hh_traub.mod" "././izhikevich.mod" "././netstim2.mod" "././poisson_stim_refractory.mod" "././quantal_stp.mod" "././refrac.mod" "././reset.mod" "././stdwa_guetig.mod" "././stdwa_softlimits.mod" "././stdwa_songabbott.mod" "././stdwa_symm.mod" "././stdwa_vogels2011.mod" "././stochastic_synapse.mod" "././stochastic_tsodyksmarkram.mod" "././tmgsyn.mod" "././tmisyn.mod" "././tsodyksmarkram.mod" "././vecstim.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL .././adexp.mod -> NMODL .././alphaisyn.mod -> NMODL .././alphasyn.mod Translating adexp.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/adexp.c Translating alphaisyn.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/alphaisyn.c Translating alphasyn.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/alphasyn.c Thread Safe Thread Safe Thread Safe -> NMODL .././expisyn.mod -> NMODL .././gammastim.mod -> NMODL .././gap.mod Translating expisyn.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/expisyn.c Translating gammastim.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/gammastim.c Notice: set_seed is not thread safe Translating gap.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/gap.c Notice: normrand is not thread safe Notice: scop_random is not thread safe Notice: normrand is not thread safe Notice: scop_random is not thread safe Notice: scop_random is not thread safe Thread Safe Thread Safe -> NMODL .././gif.mod -> NMODL .././gsfa_grr.mod -> NMODL .././hh_traub.mod Translating gif.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/gif.c Translating gsfa_grr.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/gsfa_grr.c Notice: Use of POINTER is not thread safe. Translating hh_traub.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/hh_traub.c Notice: VERBATIM blocks are not thread safe Thread Safe Notice: scop_random is not thread safe Warning: value undefined. (declared within VERBATIM?) Thread Safe -> NMODL .././izhikevich.mod -> NMODL .././netstim2.mod -> NMODL .././poisson_stim_refractory.mod Translating izhikevich.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/izhikevich.c Translating netstim2.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/netstim2.c Thread Safe Translating poisson_stim_refractory.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/poisson_stim_refractory.c Notice: set_seed is not thread safe Notice: exprand is not thread safe Thread Safe Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it only affects and is affected by discrete events. As such it is not located in a section and is not associated with an integrator -> NMODL .././quantal_stp.mod -> NMODL .././refrac.mod -> NMODL .././reset.mod Translating quantal_stp.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/quantal_stp.c Notice: Use of POINTER is not thread safe. Translating refrac.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/refrac.c Notice: VERBATIM blocks are not thread safe Notice: scop_random is not thread safe Warning: value undefined. (declared within VERBATIM?) Translating reset.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/reset.c Thread Safe Thread Safe -> NMODL .././stdwa_guetig.mod -> NMODL .././stdwa_softlimits.mod -> NMODL .././stdwa_songabbott.mod Translating stdwa_guetig.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/stdwa_guetig.c Notice: Use of POINTER is not thread safe. Translating stdwa_softlimits.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/stdwa_softlimits.c Notice: Use of POINTER is not thread safe. Translating stdwa_songabbott.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/stdwa_songabbott.c Notice: Use of POINTER is not thread safe. -> NMODL .././stdwa_symm.mod -> NMODL .././stdwa_vogels2011.mod -> NMODL .././stochastic_synapse.mod -> NMODL .././stochastic_tsodyksmarkram.mod Translating stdwa_symm.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/stdwa_symm.c Notice: Use of POINTER is not thread safe. Translating stdwa_vogels2011.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/stdwa_vogels2011.c Notice: Use of POINTER is not thread safe. Translating stochastic_synapse.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/stochastic_synapse.c Notice: Use of POINTER is not thread safe. Notice: VERBATIM blocks are not thread safe Notice: scop_random is not thread safe Warning: value undefined. (declared within VERBATIM?) Translating stochastic_tsodyksmarkram.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/stochastic_tsodyksmarkram.c Notice: Use of POINTER is not thread safe. -> NMODL .././tmgsyn.mod -> NMODL .././tmisyn.mod Notice: VERBATIM blocks are not thread safe -> NMODL .././tsodyksmarkram.mod Notice: scop_random is not thread safe Warning: value undefined. (declared within VERBATIM?) -> NMODL .././vecstim.mod Translating tmgsyn.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/tmgsyn.c Translating tmisyn.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/tmisyn.c Translating tsodyksmarkram.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/tsodyksmarkram.c Notice: Use of POINTER is not thread safe. Thread Safe Thread Safe -> Compiling adexp.c Translating vecstim.mod into /builddir/build/BUILD/PyNN-0.12.2/pyNN/neuron/nmodl/x86_64/vecstim.c Notice: VERBATIM blocks are not thread safe -> Compiling alphaisyn.c -> Compiling alphasyn.c -> Compiling expisyn.c -> Compiling gammastim.c -> Compiling gap.c -> Compiling gif.c -> Compiling gsfa_grr.c -> Compiling hh_traub.c -> Compiling izhikevich.c -> Compiling netstim2.c -> Compiling poisson_stim_refractory.c -> Compiling quantal_stp.c -> Compiling refrac.c -> Compiling reset.c -> Compiling stdwa_guetig.c -> Compiling stdwa_softlimits.c -> Compiling stdwa_songabbott.c -> Compiling stdwa_symm.c -> Compiling stdwa_vogels2011.c -> Compiling stochastic_synapse.c -> Compiling stochastic_tsodyksmarkram.c -> Compiling tmgsyn.c -> Compiling tmisyn.c -> Compiling tsodyksmarkram.c -> Compiling vecstim.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.12 -lX11 -lXext Successfully created x86_64/special ~/build/BUILD/PyNN-0.12.2 ~/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions ~/build/BUILD/PyNN-0.12.2 + popd + pushd ./build/lib/pyNN/nest/extensions/ + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Dwith-nest=/usr/bin/nest-config CMake Deprecation Warning at CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The CXX compiler identification is GNU 13.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done ------------------------------------------------------- pynn_extensions Configuration Summary ------------------------------------------------------- C++ compiler : /usr/bin/g++ Build static libs : OFF C++ compiler flags : -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-- Configuring done (0.4s) NEST compiler flags : -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -Wall -fopenmp -fdiagnostics-color=auto NEST include dirs : -I/usr/include/nest -I/usr/include -I/usr/include -I/usr/include -I/usr/include -I/usr/include NEST libraries flags : -L/usr/lib64/nest -lnest -lsli /lib64/libltdl.so /lib64/libreadline.so /lib64/libncurses.so /usr/lib64/libgsl.so /usr/lib64/libgslcblas.so /usr/lib64/libneurosim.so /usr/lib64/libpy3neurosim.so /usr/lib/gcc/x86_64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ------------------------------------------------------- You can build and install pynn_extensions now, using make make install pynn_extensions will be installed to: /usr/lib64 -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j6 --verbose Change Dir: '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j6 /usr/bin/cmake -S/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions -B/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build/CMakeFiles /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/pynn_extensions_module.dir/build.make CMakeFiles/pynn_extensions_module.dir/depend /usr/bin/gmake -f CMakeFiles/pynn_extensions_lib.dir/build.make CMakeFiles/pynn_extensions_lib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' cd /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build/CMakeFiles/pynn_extensions_module.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' cd /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build/CMakeFiles/pynn_extensions_lib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/pynn_extensions_module.dir/build.make CMakeFiles/pynn_extensions_module.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/pynn_extensions_lib.dir/build.make CMakeFiles/pynn_extensions_lib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' [ 25%] Building CXX object CMakeFiles/pynn_extensions_module.dir/pynn_extensions.cpp.o [ 50%] Building CXX object CMakeFiles/pynn_extensions_lib.dir/pynn_extensions.cpp.o /usr/bin/g++ -Dpynn_extensions_module_EXPORTS -I/usr/include/nest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -Wall -fopenmp -fdiagnostics-color=auto -DLTX_MODULE -MD -MT CMakeFiles/pynn_extensions_module.dir/pynn_extensions.cpp.o -MF CMakeFiles/pynn_extensions_module.dir/pynn_extensions.cpp.o.d -o CMakeFiles/pynn_extensions_module.dir/pynn_extensions.cpp.o -c /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/pynn_extensions.cpp /usr/bin/g++ -DLINKED_MODULE -Dpynn_extensions_lib_EXPORTS -I/usr/include/nest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -Wall -fopenmp -fdiagnostics-color=auto -MD -MT CMakeFiles/pynn_extensions_lib.dir/pynn_extensions.cpp.o -MF CMakeFiles/pynn_extensions_lib.dir/pynn_extensions.cpp.o.d -o CMakeFiles/pynn_extensions_lib.dir/pynn_extensions.cpp.o -c /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/pynn_extensions.cpp /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/pynn_extensions.cpp:18:10: fatal error: dynamicloader.h: No such file or directory 18 | #include "dynamicloader.h" | ^~~~~~~~~~~~~~~~~ compilation terminated. /builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/pynn_extensions.cpp:18:10: fatal error: dynamicloader.h: No such file or directory 18 | #include "dynamicloader.h" | ^~~~~~~~~~~~~~~~~ compilation terminated. gmake[2]: *** [CMakeFiles/pynn_extensions_module.dir/build.make:79: CMakeFiles/pynn_extensions_module.dir/pynn_extensions.cpp.o] Error 1 gmake[2]: Leaving directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' gmake[1]: *** [CMakeFiles/Makefile2:115: CMakeFiles/pynn_extensions_module.dir/all] Error 2 gmake[1]: *** Waiting for unfinished jobs.... gmake[2]: Leaving directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' gmake[2]: *** [CMakeFiles/pynn_extensions_lib.dir/build.make:79: CMakeFiles/pynn_extensions_lib.dir/pynn_extensions.cpp.o] Error 1 gmake[1]: *** [CMakeFiles/Makefile2:141: CMakeFiles/pynn_extensions_lib.dir/all] Error 2 gmake[1]: Leaving directory '/builddir/build/BUILD/PyNN-0.12.2/build/lib/pyNN/nest/extensions/redhat-linux-build' gmake: *** [Makefile:159: all] Error 2 RPM build errors: error: Bad exit status from /var/tmp/rpm-tmp.P7gZ44 (%build) Bad exit status from /var/tmp/rpm-tmp.P7gZ44 (%build) Child return code was: 1 EXCEPTION: [Error('Command failed: \n # /usr/bin/systemd-nspawn -q -M 0db279cffaa34cda8916b77766fc67e3 -D /var/lib/mock/f39-build-50563984-6053015/root -a -u mockbuild --capability=cap_ipc_lock --bind=/tmp/mock-resolv.tiwi3i3h:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin \'--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"\' \'--setenv=PS1= \\s-\\v\\$ \' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c \'/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pynn.spec\'\n', 1)] Traceback (most recent call last): File "/usr/lib/python3.12/site-packages/mockbuild/trace_decorator.py", line 93, in trace result = func(*args, **kw) ^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.12/site-packages/mockbuild/util.py", line 612, in do_with_status raise exception.Error("Command failed: \n # %s\n%s" % (cmd_pretty(command, env), output), child.returncode) mockbuild.exception.Error: Command failed: # /usr/bin/systemd-nspawn -q -M 0db279cffaa34cda8916b77766fc67e3 -D /var/lib/mock/f39-build-50563984-6053015/root -a -u mockbuild --capability=cap_ipc_lock --bind=/tmp/mock-resolv.tiwi3i3h:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin '--setenv=PROMPT_COMMAND=printf "\033]0;\007"' '--setenv=PS1= \s-\v\$ ' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pynn.spec'