Mock Version: 5.5 Mock Version: 5.5 Mock Version: 5.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/nco.spec'], chrootPath='/var/lib/mock/f41-build-50431350-6036127/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.c5yy7woi:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.c5yy7woi:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '766a11ae1cff4d2db667d0732e17f812', '-D', '/var/lib/mock/f41-build-50431350-6036127/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.c5yy7woi:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/nco.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1713225600 Wrote: /builddir/build/SRPMS/nco-5.2.4-1.fc41.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/nco.spec'], chrootPath='/var/lib/mock/f41-build-50431350-6036127/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.c5yy7woi:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.c5yy7woi:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'bfcebd5fe8864c7eb7551a6c3bc88227', '-D', '/var/lib/mock/f41-build-50431350-6036127/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.c5yy7woi:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/nco.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1713225600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.9g2hrP + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf nco-5.2.4 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/nco-5.2.4.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd nco-5.2.4 + rm -rf /builddir/build/BUILD/nco-5.2.4-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/nco-5.2.4-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (nco-install_C_headers.patch):' Patch #0 (nco-install_C_headers.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .install_C_headers --fuzz=0 patching file src/nco/Makefile.in Hunk #1 succeeded at 782 (offset 15 lines). + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.PYUys8 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.2.4 + export CPPFLAGS=-I/usr/include/udunits2 + CPPFLAGS=-I/usr/include/udunits2 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2024-04-15 18:47:22.000000000 +0000 +++ ./configure 2024-04-20 23:50:36.121370203 +0000 @@ -8791,7 +8791,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="sed -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" $lt_cdecl_hook\ " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" @@ -23142,7 +23142,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./autobld/config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./autobld/config.guess ++ basename ./autobld/config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./autobld/config.guess '/usr/lib/rpm/redhat/config.guess' -> './autobld/config.guess' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./autobld/config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./autobld/config.sub ++ basename ./autobld/config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./autobld/config.sub '/usr/lib/rpm/redhat/config.sub' -> './autobld/config.sub' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./autobld/ltmain.sh ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info HAVE_ANTLR=yes --disable-dependency-tracking --includedir=/usr/include/nco checking build system type... x86_64-redhat-linux-gnu checking host system type... x86_64-redhat-linux-gnu checking target system type... x86_64-redhat-linux-gnu ./configure: line 3577: git: command not found checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for x86_64-redhat-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking for flex... flex checking for lex output file root... lex.yy checking for lex library... none needed checking whether yytext is a pointer... yes checking whether ln -s works... yes checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-redhat-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-redhat-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-redhat-linux-gnu-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-redhat-linux-gnu-strip... no checking for strip... strip checking for x86_64-redhat-linux-gnu-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ./configure: line 8797: -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p': No such file or directory ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-redhat-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for working memcmp... yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... no checking for working strtod... yes checking for canonicalize_file_name... yes checking for creat... yes checking for floor... no checking for gethostname... yes checking for getpagesize... yes checking for getrusage... yes checking for memchr... yes checking for memmove... yes checking for memset... yes checking for mkstemp... yes checking for pow... no checking for readlink... yes checking for realpath... yes checking for regcomp... yes checking for setlocale... yes checking for sqrt... no checking for strchr... yes checking for strerror... yes checking for strpbrk... yes checking for strrchr... yes checking for strstr... yes checking for strtol... yes checking for egrep... (cached) /usr/bin/grep -E checking for fcntl.h... yes checking for getopt.h... yes checking for libintl.h... yes checking for limits.h... yes checking for locale.h... yes checking for netinet/in.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for cstdlib... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t... yes checking for gid_t... yes checking for ptrdiff_t... yes checking size of int*... 8 checking for gcc option to enable large file support... none needed ################################# # Test for netCDF # ################################ checking for netcdf.h... yes checking for nc_open in -lnetcdf... yes ################################# # Test for netCDF4 support # ################################# checking for gcc options needed to detect all undeclared functions... none needed checking whether NC_CHUNKED is declared... yes configure: netcdf.h contains netCDF4 definitions checking for nc_def_var_chunking in -lnetcdf... yes configure: Good news: Simple program compiles and links to netCDF4 library checking for netcdf_mem.h... yes checking for gcc option to support OpenMP... -fopenmp configure: OpenMP support enabled Beginning generic tests for DAP support Testing for DAP-netCDF support (is DAP in libnetcdf.a?)... checking for daperror in -lnetcdf... yes configure: DAP support enabled checking for getopt_long... yes checking for sinf in -lsunmath... no checking for gettext in -lintl... no checking for res_init in -lresolv... no checking for main in -lsocket... no checking for main in -lthread... no checking for nco_open in -lnco... no checking for nc_inq_format... yes checking for nc_inq_path... yes checking for nc_set_log_level... yes checking for nc_rename_grp... yes checking for getopt... yes checking for getopt_long... (cached) yes checking for atan2... no checking for acosf... no checking for asinf... no checking for atanf... no checking for atan2f... no checking for cosf... no checking for expf... no checking for fabsf... no checking for fmodf... no checking for log10f... no checking for logf... no checking for powf... no checking for sinf... no checking for sqrtf... no checking for tanf... no checking for erff... no checking for erfcf... no checking for gammaf... no checking for acoshf... no checking for asinhf... no checking for atanhf... no checking for coshf... no checking for sinhf... no checking for tanhf... no checking for ceilf... no checking for floorf... no checking for nearbyint... no checking for rint... no checking for round... no checking for trunc... no checking for nearbyintf... no checking for rintf... no checking for roundf... no checking for truncf... no checking for getopt_long... (cached) yes checking for strdup... yes checking for strcasecmp... yes checking for strsep... yes checking for strcasestr... yes checking for htonl... yes checking for htons... yes checking for ntohl... yes checking for ntohs... yes checking for __builtin_bswap16... no checking for __builtin_bswap32... no checking for __builtin_bswap64... no ########################################################## # Sorting out MacOS build parameters # ########################################################## ################################# # Testing for ANTLR support # ################################# checking for runantlr... yes configure: antlr library was found checking for antlr/CommonToken.hpp... yes INFO: ANTLR development support found---will build nco++ directory and ncap2 checking whether NCO C++ interface library libnco_c++ should be built... no ######################################## # Testing for GSL support # ######################################## configure: These GSL library and header tests must succeed for GSL support: checking for gsl_sf_gamma_inc in -lgsl... yes checking for /usr/include/gsl/gsl_sf_gamma.h... yes configure: GSL support enabled ######################################## # Testing for CCR support # ######################################## checking where to put HDF5 plugins... . checking whether Community Codec Repository library should be used... no checking for regex.h... yes checking for sys/types.h... (cached) yes checking for regexec... yes checking for regcomp... (cached) yes checking for regfree... yes ######################################## # Testing for UDUNITS2 support # ######################################## checking for udunits2.h... yes checking for library containing ut_parse... -ludunits2 configure: UDUnits2 support enabled checking for ncgen... /usr/bin/ncgen configure: Creating sample netCDF data files for self-tests ############################### # Require Shared Libs? # ############################### checking for makeinfo... yes MAKEINFO_VERSION=7.1 configure: Documentation support enabled checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating src/Makefile config.status: creating src/nco/Makefile config.status: creating man/Makefile config.status: creating src/nco++/Makefile config.status: creating doc/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration Parameters: ANTLR_INC............ ANTLR_ROOT........... AR_FLAGS............. cru CC................... gcc CFLAGS............... -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 CPP.................. gcc -E CPPFLAGS............. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include CXX.................. g++ CXXFLAGS............. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ENABLE_CCR........... no ENABLE_DAP........... yes ENABLE_GSL........... yes ENABLE_NETCDF4....... yes ENABLE_OPENMP........ yes ENABLE_UDUNITS2...... yes GSL_INC.............. /usr/include GSL_ROOT............. /usr HAVE_ANTLR........... yes HAVE_MAKEINFO........ yes HAVE_NETCDF4_H....... yes HDF5_PLUGIN_PATH..... . HOST................. HOSTNAME............. bfcebd5fe8864c7eb7551a6c3bc88227 LDFLAGS.............. -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes LIBS................. -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -lgsl -lgslcblas -lm NETCDF_INC........... NETCDF_ROOT.......... /usr OPENMP_CFLAGS........ -fopenmp host................. x86_64-redhat-linux-gnu install prefix ...... /usr ******************************************************************* Configuration complete. You are now ready to run 'make'. Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax). If the build fails, please examine the file 'configure.eg' in the top-level NCO directory. It contains examples known to build NCO for various platforms and compilers. ******************************************************************* + /usr/bin/make -O -j6 V=1 VERBOSE=1 /usr/bin/make all-recursive Making all in data make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /builddir/build/BUILD/nco-5.2.4/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: /builddir/build/BUILD/nco-5.2.4/src/nco/ncks: No such file or directory make[2]: [Makefile:585: in_4c.nc] Error 127 (ignored) make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -o big.nc big.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -k netCDF-4 -o ref_utf8.nc ref_utf8.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -k netCDF-4 -o in_4.nc in_4.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/ncgen -k netCDF-4 -lb -o "file://in_zarr4#mode=nczarr,file" in_zarr4.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' ln -s -f in_zarr4 h0001 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' ln -s -f in_zarr4 h0002 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' ln -s -f in_zarr4 h0003 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' Making all in src Making all in nco make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncatted.o ncatted.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_bnr.lo nco_bnr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_bnr.c -fPIC -DPIC -o .libs/nco_bnr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_bnr.c -o nco_bnr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnf_dmn.lo nco_cnf_dmn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_dmn.c -fPIC -DPIC -o .libs/nco_cnf_dmn.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_dmn.c -o nco_cnf_dmn.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_aux.lo nco_aux.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_aux.c -o nco_aux.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cln_utl.lo nco_cln_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cln_utl.c -fPIC -DPIC -o .libs/nco_cln_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cln_utl.c -o nco_cln_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_cln_utl.c: In function ‘nco_cln_var_prs’: nco_cln_utl.c:1339:27: warning: ‘mss_val_flt’ may be used uninitialized [-Wmaybe-uninitialized] 1339 | if(var->has_mss_val && var->val.fp[idx] == mss_val_flt){ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_cln_utl.c:1335:11: note: ‘mss_val_flt’ was declared here 1335 | float mss_val_flt; | ^~~~~~~~~~~ nco_cln_utl.c:1320:27: warning: ‘mss_val_dbl’ may be used uninitialized [-Wmaybe-uninitialized] 1320 | if(var->has_mss_val && var->val.dp[idx] == mss_val_dbl){ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_cln_utl.c:1316:12: note: ‘mss_val_dbl’ was declared here 1316 | double mss_val_dbl; | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnv_arm.lo nco_cnv_arm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_arm.c -o nco_cnv_arm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnv_csm.lo nco_cnv_csm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_csm.c -fPIC -DPIC -o .libs/nco_cnv_csm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_csm.c -o nco_cnv_csm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' In file included from /usr/include/stdio.h:980, from nco_cnv_csm.h:17, from nco_cnv_csm.c:10: In function ‘fprintf’, inlined from ‘nco_cnv_cf_cll_mth_add’ at nco_cnv_csm.c:517:48: /usr/include/bits/stdio2.h:111:10: warning: ‘cll_mth_clm’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_cnv_csm.c: In function ‘nco_cnv_cf_cll_mth_add’: nco_cnv_csm.c:449:9: note: ‘cll_mth_clm’ was declared here 449 | char *cll_mth_clm; /* [sng] Cell methods for climatology */ | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnf_typ.lo nco_cnf_typ.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_typ.c -fPIC -DPIC -o .libs/nco_cnf_typ.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_typ.c -o nco_cnf_typ.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_crt.lo nco_crt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_crt.c -fPIC -DPIC -o .libs/nco_crt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_crt.c -o nco_crt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_att_utl.lo nco_att_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_att_utl.c -o nco_att_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_cnk.lo nco_cnk.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnk.c -fPIC -DPIC -o .libs/nco_cnk.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnk.c -o nco_cnk.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' In file included from /usr/include/stdio.h:980, from nco_cnk.h:18, from nco_cnk.c:45: In function ‘fprintf’, inlined from ‘nco_cnk_sz_set_trv’ at nco_cnk.c:1330:8: /usr/include/bits/stdio2.h:111:10: warning: ‘prt_sum’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_cnk.c: In function ‘nco_cnk_sz_set_trv’: nco_cnk.c:1305:12: note: ‘prt_sum’ was declared here 1305 | size_t prt_sum; /* [nbr] Partial sum (sum of coefficients times powers of two for higher powers */ | ^~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_dbg.lo nco_dbg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dbg.c -o nco_dbg.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_ctl.lo nco_ctl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ctl.c -fPIC -DPIC -o .libs/nco_ctl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ctl.c -o nco_ctl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_dmn_utl.lo nco_dmn_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dmn_utl.c -fPIC -DPIC -o .libs/nco_dmn_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dmn_utl.c -o nco_dmn_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_grp_trv.lo nco_grp_trv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_trv.c -fPIC -DPIC -o .libs/nco_grp_trv.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_trv.c -o nco_grp_trv.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_flt.lo nco_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_flt.c -fPIC -DPIC -o .libs/nco_flt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_flt.c -o nco_flt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_flt.c: In function ‘nco_flt_hdf5_prs’: nco_flt.c:395:28: warning: array subscript ‘unsigned int[0]’ is partly outside array bounds of ‘short int[1]’ [-Warray-bounds=] 395 | u32_lst[u32_nbr++]=*ui32p; | ^~~~~~ nco_flt.c:392:15: note: object ‘sht_foo’ of size 2 392 | short sht_foo=(short)strtol(prm_lst[prm_idx],&sng_cnv_rcd,NCO_SNG_CNV_BASE10); | ^~~~~~~ nco_flt.c:389:28: warning: array subscript ‘unsigned int[0]’ is partly outside array bounds of ‘short unsigned int[1]’ [-Warray-bounds=] 389 | u32_lst[u32_nbr++]=*ui32p; | ^~~~~~ nco_flt.c:386:24: note: object ‘usht_foo’ of size 2 386 | unsigned short usht_foo=(unsigned short)strtoul(prm_lst[prm_idx],&sng_cnv_rcd,NCO_SNG_CNV_BASE10); | ^~~~~~~~ nco_flt.c:330:37: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 330 | (void)fprintf(stderr,"%s: ERROR %s reports supplied filter string is empty\n",nco_prg_nm_get(),flt_sng); | ^~ nco_flt.c: In function ‘nco_qnt_mtd’: nco_flt.c:1649:11: warning: ‘aed_ppc_alg.att_nm’ may be used uninitialized [-Wmaybe-uninitialized] 1649 | (void)nco_aed_prc(nc_id,var_cnt_id,aed_cnt_alg); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_flt.c:1462:11: note: ‘aed_ppc_alg.att_nm’ was declared here 1462 | aed_sct aed_ppc_alg; | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_fl_utl.lo nco_fl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_fl_utl.c -o nco_fl_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_fl_utl.c: In function ‘nco_fl_nm_prs’: nco_fl_utl.c:1754:45: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~ nco_fl_utl.c:1754:41: note: directive argument in the range [-2147483648, 2147483645] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:980, from nco_fl_utl.h:26, from nco_fl_utl.c:10: In function ‘sprintf’, inlined from ‘nco_fl_nm_prs’ at nco_fl_utl.c:1754:8: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 9 and 19 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:548, from nco_fl_utl.h:28: In function ‘strncpy’, inlined from ‘nco_fl_mk_lcl’ at nco_fl_utl.c:1445:13: /usr/include/bits/string_fortified.h:100:10: warning: ‘strncpy’ destination unchanged after copying no bytes [-Wstringop-truncation] 100 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ nco_fl_utl.c: In function ‘nco_fl_ncz2psx’: nco_fl_utl.c:2581:25: warning: ‘psx_drc_lcl’ may be used uninitialized [-Wmaybe-uninitialized] 2581 | psx_drc_lcl[0]='.'; | ~~~~~~~~~~~~~~^~~~ nco_fl_utl.c:2519:11: note: ‘psx_drc_lcl’ was declared here 2519 | char *psx_drc_lcl; /* O [sng] POSIX path only, no filename, suitable for directory stat() */ | ^~~~~~~~~~~ nco_fl_utl.c:2595:29: warning: ‘psx_fll_lcl’ may be used uninitialized [-Wmaybe-uninitialized] 2595 | if(psx_fll) psx_fll_lcl=(char *)strdup(psx_fll_lcl); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_fl_utl.c:2518:11: note: ‘psx_fll_lcl’ was declared here 2518 | char *psx_fll_lcl; /* O [sng] Full POSIX path with filename, suitable for file stat() */ | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_kd.lo nco_kd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_kd.c -fPIC -DPIC -o .libs/nco_kd.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_kd.c -o nco_kd.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_lst_utl.lo nco_lst_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_lst_utl.c -o nco_lst_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_lst_utl.c: In function ‘nco_fmt_sng_printf_subst’: nco_lst_utl.c:38:89: warning: unknown escape sequence: '\.' 38 | const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */ | ^ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_mmr.lo nco_mmr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mmr.c -fPIC -DPIC -o .libs/nco_mmr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mmr.c -o nco_mmr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_md5.lo nco_md5.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_md5.c -fPIC -DPIC -o .libs/nco_md5.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_md5.c -o nco_md5.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_lmt.lo nco_lmt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_lmt.c -fPIC -DPIC -o .libs/nco_lmt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_lmt.c -o nco_lmt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_mta.lo nco_mta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mta.c -fPIC -DPIC -o .libs/nco_mta.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mta.c -o nco_mta.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_mss_val.lo nco_mss_val.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mss_val.c -fPIC -DPIC -o .libs/nco_mss_val.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_mss_val.c -o nco_mss_val.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_omp.lo nco_omp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_omp.c -fPIC -DPIC -o .libs/nco_omp.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_omp.c -o nco_omp.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_msa.lo nco_msa.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_msa.c -fPIC -DPIC -o .libs/nco_msa.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_msa.c -o nco_msa.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_pck.lo nco_pck.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_pck.c -o nco_pck.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_pck.c: In function ‘nco_pck_map_get’: nco_pck.c:160:88: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 160 | (void)fprintf(stderr,"%s: ERROR %s reports empty user-specified packing map string %s\n",nco_prg_nm,fnc_nm,nco_pck_map_sng); | ^~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_ply_lst.lo nco_ply_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply_lst.c -fPIC -DPIC -o .libs/nco_ply_lst.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply_lst.c -o nco_ply_lst.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_ply_lst.c: In function ‘nco_poly_lst_mk_vrl_crt’: nco_ply_lst.c:608:10: warning: variable ‘size’ set but not used [-Wunused-but-set-variable] 608 | kd_box size; | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_map.lo nco_map.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_map.c -fPIC -DPIC -o .libs/nco_map.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_map.c -o nco_map.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_map.c: In function ‘nco_map_mk’: nco_map.c:302:12: warning: variable ‘flg_grd_out_rct’ set but not used [-Wunused-but-set-variable] 302 | nco_bool flg_grd_out_rct=False; /* [flg] Rectangular coordinates */ | ^~~~~~~~~~~~~~~ nco_map.c:300:12: warning: variable ‘flg_grd_in_rct’ set but not used [-Wunused-but-set-variable] 300 | nco_bool flg_grd_in_rct=False; /* [flg] Rectangular coordinates */ | ^~~~~~~~~~~~~~ nco_map.c:231:7: warning: variable ‘bnd_nbr_out’ set but not used [-Wunused-but-set-variable] 231 | int bnd_nbr_out; /* [nbr] Number of vertices for destination grid coordinates */ | ^~~~~~~~~~~ nco_map.c:213:8: warning: variable ‘col_nbr_in’ set but not used [-Wunused-but-set-variable] 213 | long col_nbr_in; /* [idx] Number of columns in source grid */ | ^~~~~~~~~~ nco_map.c:212:7: warning: variable ‘bnd_nbr_in’ set but not used [-Wunused-but-set-variable] 212 | int bnd_nbr_in; /* [nbr] Number of vertices for source grid coordinates */ | ^~~~~~~~~~ nco_map.c:418:15: warning: ‘lon_nbr_out’ may be used uninitialized [-Wmaybe-uninitialized] 418 | if(idx%lon_nbr_out == 0) idx_tst=idx; | ~~~^~~~~~~~~~~~ nco_map.c:233:8: note: ‘lon_nbr_out’ was declared here 233 | long lon_nbr_out; /* [nbr] Number of longitudes in destination grid */ | ^~~~~~~~~~~ nco_map.c:402:15: warning: ‘lon_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized] 402 | if(idx%lon_nbr_in == 0) idx_tst=idx; | ~~~^~~~~~~~~~~ nco_map.c:214:8: note: ‘lon_nbr_in’ was declared here 214 | long lon_nbr_in; /* [idx] Number of longitudes in source grid */ | ^~~~~~~~~~ nco_map.c: In function ‘nco_map_chk’: nco_map.c:2365:30: warning: ‘ival_a’ may be used uninitialized [-Wmaybe-uninitialized] 2365 | if(has_mask_a && ival_a[idx_col] == 0){ | ^ nco_map.c:2351:10: note: ‘ival_a’ was declared here 2351 | int *ival_a; | ^~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_netcdf.lo nco_netcdf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_netcdf.c -o nco_netcdf.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_ply.lo nco_ply.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply.c -fPIC -DPIC -o .libs/nco_ply.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply.c -o nco_ply.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_rec_var.lo nco_rec_var.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rec_var.c -o nco_rec_var.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_rth_flt.lo nco_rth_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_flt.c -fPIC -DPIC -o .libs/nco_rth_flt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_flt.c -o nco_rth_flt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_ppc.lo nco_ppc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ppc.c -fPIC -DPIC -o .libs/nco_ppc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ppc.c -o nco_ppc.o >/dev/null 2>&1 nco_ppc.c: In function ‘nco_ppc_bitmask’: nco_ppc.c:1226:32: warning: ‘mss_val_cmp_dbl’ may be used uninitialized [-Wmaybe-uninitialized] 1226 | if(op1.dp[idx] != 0ULL && op1.dp[idx] != mss_val_cmp_dbl){ /* Never quantize upwards floating point values of zero */ | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_ppc.c:666:10: note: ‘mss_val_cmp_dbl’ was declared here 666 | double mss_val_cmp_dbl; /* Missing value for comparison to double precision values */ | ^~~~~~~~~~~~~~~ nco_ppc.c:1052:11: warning: ‘mss_val_cmp_flt’ may be used uninitialized [-Wmaybe-uninitialized] 1052 | if(op1.fp[idx] != mss_val_cmp_flt && op1.fp[idx] != 0.0f){ /* Never quantize upwards floating point values of zero */ | ^ nco_ppc.c:668:9: note: ‘mss_val_cmp_flt’ was declared here 668 | float mss_val_cmp_flt; /* Missing value for comparison to single precision values */ | ^~~~~~~~~~~~~~~ nco_ppc.c:1005:18: warning: ‘u32_ptr’ may be used uninitialized [-Wmaybe-uninitialized] 1005 | u32_ptr[idx]+=msk_f32_u32_hshv; /* Add 1 to the MSB of LSBs, carry 1 to mantissa or even exponent */ | ~~~~~~~^~~~~ nco_ppc.c:680:17: note: ‘u32_ptr’ was declared here 680 | unsigned int *u32_ptr; | ^~~~~~~ nco_ppc.c:1210:22: warning: ‘u64_ptr’ may be used uninitialized [-Wmaybe-uninitialized] 1210 | u64_ptr[idx]&=msk_f64_u64_zro; | ~~~~~~~^~~~~ nco_ppc.c:684:27: note: ‘u64_ptr’ was declared here 684 | unsigned long long int *u64_ptr; | ^~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_rth_utl.lo nco_rth_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_utl.c -fPIC -DPIC -o .libs/nco_rth_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_utl.c -o nco_rth_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_scl_utl.lo nco_scl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scl_utl.c -fPIC -DPIC -o .libs/nco_scl_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scl_utl.c -o nco_scl_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_scm.lo nco_scm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scm.c -fPIC -DPIC -o .libs/nco_scm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scm.c -o nco_scm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_sld.lo nco_sld.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sld.c -fPIC -DPIC -o .libs/nco_sld.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sld.c -o nco_sld.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_sng_utl.lo nco_sng_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sng_utl.c -o nco_sng_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_sng_utl.c: In function ‘nm2sng_cdl’: nco_sng_utl.c:270:41: warning: ‘__snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] 270 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In file included from /usr/include/stdio.h:980, from nco_sng_utl.h:21, from nco_sng_utl.c:10: In function ‘snprintf’, inlined from ‘nm2sng_cdl’ at nco_sng_utl.c:270:2: /usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output 5 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_sng_utl.c: In function ‘nm2sng_fl’: nco_sng_utl.c:466:41: warning: ‘__snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] 466 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In function ‘snprintf’, inlined from ‘nm2sng_fl’ at nco_sng_utl.c:466:2: /usr/include/bits/stdio2.h:68:10: note: ‘__snprintf_chk’ output 5 bytes into a destination of size 4 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_srm.lo nco_srm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_srm.c -o nco_srm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_sph.lo nco_sph.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sph.c -fPIC -DPIC -o .libs/nco_sph.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sph.c -o nco_sph.o >/dev/null 2>&1 nco_sph.c: In function ‘nco_sph_seg_int_old’: nco_sph.c:508:10: warning: variable ‘nx_ci’ set but not used [-Wunused-but-set-variable] 508 | double nx_ci; | ^~~~~ nco_sph.c:506:10: warning: variable ‘nx3’ set but not used [-Wunused-but-set-variable] 506 | double nx3; | ^~~ nco_sph.c:505:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable] 505 | double nx2; | ^~~ nco_sph.c: In function ‘nco_sph_seg_parallel’: nco_sph.c:1426:10: warning: variable ‘nx3’ set but not used [-Wunused-but-set-variable] 1426 | double nx3; | ^~~ nco_sph.c:1425:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable] 1425 | double nx2; | ^~~ nco_sph.c:1424:10: warning: variable ‘nx1’ set but not used [-Wunused-but-set-variable] 1424 | double nx1; | ^~~ nco_sph.c: In function ‘nco_sph_seg_vrt_int’: nco_sph.c:1839:10: warning: variable ‘nx_av’ set but not used [-Wunused-but-set-variable] 1839 | double nx_av; | ^~~~~ nco_sph.c:1838:10: warning: variable ‘nx_ab’ set but not used [-Wunused-but-set-variable] 1838 | double nx_ab; | ^~~~~ nco_sph.c: In function ‘nco_sph_is_convex’: nco_sph.c:2472:8: warning: variable ‘n1’ set but not used [-Wunused-but-set-variable] 2472 | double n1; | ^~ nco_sph.c: In function ‘nco_rll_intersect’: nco_sph.c:3305:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable] 3305 | double nx2; | ^~~ nco_sph.c:3304:10: warning: variable ‘nx1’ set but not used [-Wunused-but-set-variable] 3304 | double nx1; | ^~~ In file included from /usr/include/stdio.h:980, from nco_sph.h:61, from nco_sph.c:49: In function ‘fprintf’, inlined from ‘nco_sph_seg_int_old’ at nco_sph.c:584:5: /usr/include/bits/stdio2.h:111:10: warning: ‘nx_ai’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_sph.c: In function ‘nco_sph_seg_int_old’: nco_sph.c:507:10: note: ‘nx_ai’ was declared here 507 | double nx_ai; | ^~~~~ make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_avg.lo nco_var_avg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_avg.c -o nco_var_avg.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_s1d.lo nco_s1d.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_s1d.c -fPIC -DPIC -o .libs/nco_s1d.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_s1d.c -o nco_s1d.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_s1d.c: In function ‘nco_s1d_unpack’: nco_s1d.c:1422:45: warning: ‘fl_tpl’ may be used uninitialized [-Wmaybe-uninitialized] 1422 | if(FL_RTR_RMT_LCN && RM_RMT_FL_PST_PRC) (void)nco_fl_rm(fl_tpl); | ^~~~~~~~~~~~~~~~~~~~~~~ nco_s1d.c:153:9: note: ‘fl_tpl’ was declared here 153 | char *fl_tpl; /* [sng] Template file (contains horizontal grid) */ | ^~~~~~ nco_s1d.c:1223:15: warning: ‘idx_in’ may be used uninitialized [-Wmaybe-uninitialized] 1223 | if(idx_in == var_sz_in){ | ^ nco_s1d.c:197:10: note: ‘idx_in’ was declared here 197 | size_t idx_in; /* [idx] Input grid index */ | ^~~~~~ nco_s1d.c:444:12: warning: ‘has_clm’ may be used uninitialized [-Wmaybe-uninitialized] 444 | nco_bool has_clm; /* [flg] Variable contains column dimension */ | ^~~~~~~ In file included from /usr/include/stdio.h:980, from nco_s1d.h:17, from nco_s1d.c:10: In function ‘fprintf’, inlined from ‘nco_s1d_unpack’ at nco_s1d.c:1265:46: /usr/include/bits/stdio2.h:111:10: warning: ‘mrv_idx’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_s1d.c: In function ‘nco_s1d_unpack’: nco_s1d.c:1090:8: note: ‘mrv_idx’ was declared here 1090 | long mrv_idx; /* [idx] MRV index */ | ^~~~~~~ nco_s1d.c:1705:67: warning: ‘lnd_typ_crr’ may be used uninitialized [-Wmaybe-uninitialized] 1705 | if(!flg_var_mpt && nco_dbg_lvl_get() >= nco_dbg_fl) (void)fprintf(fp_stdout,"%s: %s, idx_in = %ld, s1d_enm = %d = %s, lnd_typ_crr = %d = %s, has_mec = %d\n",nco_prg_nm_get(),var_nm,idx_in,(int)nco_s1d_typ,nco_s1d_sng(nco_s1d_typ),lnd_typ_crr,nco_lnd_typ_sng(lnd_typ_crr),has_mec); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_s1d.c:781:7: note: ‘lnd_typ_crr’ was declared here 781 | int lnd_typ_crr; /* [enm] Landunit type of current column|landunit|pft */ | ^~~~~~~~~~~ nco_s1d.c:1781:24: warning: ‘grd_idx_out’ may be used uninitialized [-Wmaybe-uninitialized] 1781 | idx_out=grd_idx_out; | ~~~~~~~^~~~~~~~~~~~ nco_s1d.c:185:12: note: ‘grd_idx_out’ was declared here 185 | long int grd_idx_out; | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_grp_utl.lo nco_grp_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_utl.c -o nco_grp_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_grp_utl.c: In function ‘nco_chk_xtn’: nco_grp_utl.c:2763:134: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2763 | if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of HDF-EOS5 standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_he5,att_xtn_val); | ^~ nco_grp_utl.c:2780:132: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2780 | if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of netCDF standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_nc,att_xtn_val); | ^~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_lst.lo nco_var_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_lst.c -o nco_var_lst.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncbo.o ncbo.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_scv.lo nco_var_scv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_scv.c -o nco_var_scv.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_prn.lo nco_prn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_prn.c -o nco_prn.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_prn.c: In function ‘nco_prn_var_val_lmt’: nco_prn.c:1649:53: warning: ‘%s’ directive writing up to 99 bytes into a region of size 86 [-Wformat-overflow=] 1649 | (void)sprintf(var_sng,"%%s%c%%ld--%%ld%c='%s' %%s",arr_lft_dlm,arr_rgt_dlm,dmn_sng); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:980, from nco_prn.h:22, from nco_prn.c:10: In function ‘sprintf’, inlined from ‘nco_prn_var_val_lmt’ at nco_prn.c:1649:10: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 19 and 118 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_prn.c: In function ‘nco_prn_var_dfn’: nco_prn.c:1884:36: warning: ‘vln_lng_avg’ may be used uninitialized [-Wmaybe-uninitialized] 1884 | if(cls_typ == NC_VLEN) (void)fprintf(fp_out,"%*s%s size (RAM) = %ld*mean_length(NC_VLEN)*sizeof(%s) = %ld*%g*%lu = %lu bytes\n",prn_ndn,spc_sng,var_trv->nm,var_sz,nco_typ_sng(bs_typ),var_sz,vln_lng_avg,(unsigned long)nco_typ_lng_udt(nc_id,bs_typ),(unsigned long)ram_sz_crr); else (void)fprintf(fp_out,"%*s%s size (RAM) = %ld*sizeof(%s) = %ld*%lu = %lu bytes\n",prn_ndn,spc_sng,var_trv->nm,var_sz,nco_typ_sng(cls_typ),var_sz,(unsigned long)nco_typ_lng_udt(nc_id,bs_typ),(unsigned long)ram_sz_crr); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:1726:9: note: ‘vln_lng_avg’ was declared here 1726 | float vln_lng_avg; /* [nbr] Mean vlen length */ | ^~~~~~~~~~~ nco_prn.c: In function ‘nco_prn_att’: nco_prn.c:807:15: warning: ‘mbr_val’ may be used uninitialized [-Wmaybe-uninitialized] 807 | rcd=nco_inq_enum_ident(grp_id,att[idx].type,mbr_val,mbr_nm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:478:15: note: ‘mbr_val’ was declared here 478 | long long mbr_val; | ^~~~~~~ nco_prn.c: In function ‘nco_prn_var_val_trv’: nco_prn.c:2549:22: warning: ‘vln_val_dp’ may be used uninitialized [-Wmaybe-uninitialized] 2549 | val_dbl=vln_val_dp[vln_idx]; | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ nco_prn.c:2391:13: note: ‘vln_val_dp’ was declared here 2391 | double *vln_val_dp; | ^~~~~~~~~~ nco_prn.c:2531:29: warning: ‘vln_val_fp’ may be used uninitialized [-Wmaybe-uninitialized] 2531 | is_mss_val=!memcmp((char *)vln_val_fp+vln_idx*val_sz_byt,var->mss_val.vp,(size_t)val_sz_byt); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:2392:12: note: ‘vln_val_fp’ was declared here 2392 | float *vln_val_fp; | ^~~~~~~~~~ nco_prn.c:2564:78: warning: ‘vln_val_ip’ may be used uninitialized [-Wmaybe-uninitialized] 2564 | if(prn_flg->PRN_MSS_VAL_BLANK && var->has_mss_val) is_mss_val=!memcmp((char *)vln_val_ip+vln_idx*val_sz_byt,var->mss_val.vp,(size_t)val_sz_byt); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:2393:14: note: ‘vln_val_ip’ was declared here 2393 | nco_int *vln_val_ip; | ^~~~~~~~~~ nco_prn.c:2569:106: warning: ‘vln_val_sp’ may be used uninitialized [-Wmaybe-uninitialized] 2569 | case NC_SHORT: for(vln_idx=0;vln_idxtype,mbr_val,mbr_nm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:2389:15: note: ‘mbr_val’ was declared here 2389 | long long mbr_val; | ^~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncecat.o ncecat.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' ncecat.c: In function ‘main’: ncecat.c:844:17: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation] 844 | gpe_arg=strncpy(gpe_arg,stb_srt_psn,strlen(stb_srt_psn)-sfx_lng); | ^ ncecat.c:844:45: note: length computed here 844 | gpe_arg=strncpy(gpe_arg,stb_srt_psn,strlen(stb_srt_psn)-sfx_lng); | ^~~~~~~~~~~~~~~~~~~ ncecat.c:802:30: warning: ‘%02d’ directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] 802 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~ ncecat.c:802:29: note: directive argument in the range [0, 2147483646] 802 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~~~ In file included from /usr/include/stdio.h:980, from ncecat.c:46: In function ‘sprintf’, inlined from ‘main’ at ncecat.c:802:9: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 3 and 11 bytes into a destination of size 3 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_utl.lo nco_var_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_utl.c -o nco_var_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_var_rth.lo nco_var_rth.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_rth.c -o nco_var_rth.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_var_rth.c: In function ‘nco_var_sbt’: nco_var_rth.c:3726:25: warning: ‘tm_srt’ may be used uninitialized [-Wmaybe-uninitialized] 3726 | tm_drn=1.0e6*(tm_end-tm_srt)/CLOCKS_PER_SEC; | ~~~~~~~^~~~~~~~ nco_var_rth.c:3539:11: note: ‘tm_srt’ was declared here 3539 | clock_t tm_srt; | ^~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncflint.o ncflint.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncpdq.o ncpdq.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncrename.o ncrename.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' test -f ncap_lex.c || /bin/sh ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncks.o ncks.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' ncks.c: In function ‘main’: ncks.c:1628:7: warning: ‘fl_lst_in’ may be used uninitialized [-Wmaybe-uninitialized] 1628 | if(fl_lst_in && fl_lst_abb == NULL) fl_lst_in=nco_sng_lst_free(fl_lst_in,fl_nbr); | ^ ncks.c:124:10: note: ‘fl_lst_in’ was declared here 124 | char **fl_lst_in; | ^~~~~~~~~ ncks.c:199:8: warning: ‘in_id_arr’ may be used uninitialized [-Wmaybe-uninitialized] 199 | int *in_id_arr; /* [id] netCDF file IDs used by OpenMP code */ | ^~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncwa.o ncwa.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncap_utl.o ncap_utl.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncap_lex.o ncap_lex.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' ncap_lex.c:2978:16: warning: ‘input’ defined but not used [-Wunused-function] 2978 | #else | ^ ncap_lex.l: In function ‘nco_yylex’: ncap_lex.l:611:34: warning: ‘%s’ directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 611 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In file included from /usr/include/stdio.h:980, from ncap_lex.c:277: In function ‘sprintf’, inlined from ‘nco_yylex’ at ncap_lex.l:611:13: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function ‘nco_yylex’: ncap_lex.l:587:36: warning: ‘%s’ directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 587 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function ‘sprintf’, inlined from ‘nco_yylex’ at ncap_lex.l:587:8: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function ‘nco_yylex’: ncap_lex.l:634:34: warning: ‘%s’ directive writing up to 255 bytes into a region of size 164 [-Wformat-overflow=] 634 | (void)sprintf(ncap_err_sng,"#Warning: unable to locate variable %s. So cannot create attribute %s",var_nm,yytext); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function ‘sprintf’, inlined from ‘nco_yylex’ at ncap_lex.l:634:13: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output 66 or more bytes (assuming 321) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o ncra.o ncra.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c -o nco_rgr.lo nco_rgr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rgr.c -fPIC -DPIC -o .libs/nco_rgr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rgr.c -o nco_rgr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' nco_rgr.c: In function ‘nco_ntp_vrt._omp_fn.0’: nco_rgr.c:3456:19: warning: ‘crd_out_mnt’ may be used uninitialized [-Wmaybe-uninitialized] 3456 | double *crd_out_mnt; /* Output vertical coordinate reversed if necessary to be monotonically increasing */ | ^~~~~~~~~~~ nco_rgr.c:3572:37: warning: ‘crd_in_mnt’ may be used uninitialized [-Wmaybe-uninitialized] 3572 | crd_in_mnt[in_idx]=crd_in[in_nbr-in_idx-1]; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:3455:19: note: ‘crd_in_mnt’ was declared here 3455 | double *crd_in_mnt; /* Input vertical coordinate reversed if necessary to be monotonically increasing */ | ^~~~~~~~~~ nco_rgr.c:3573:37: warning: ‘dat_in_mnt’ may be used uninitialized [-Wmaybe-uninitialized] 3573 | dat_in_mnt[in_idx]=dat_in[in_nbr-in_idx-1]; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:3457:19: note: ‘dat_in_mnt’ was declared here 3457 | double *dat_in_mnt; /* Input data (to be interpolated) reversed if necessary along with input grid */ | ^~~~~~~~~~ nco_rgr.c:3597:41: warning: ‘dat_out_mnt’ may be used uninitialized [-Wmaybe-uninitialized] 3597 | dat_out_mnt[out_idx]=dat_in_mnt[brk_lft_idx+1]; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:3458:19: note: ‘dat_out_mnt’ was declared here 3458 | double *dat_out_mnt; /* Output data (interpolated) reversed if necessary along with output grid */ | ^~~~~~~~~~~ nco_rgr.c:3637:23: warning: ‘FIRST_WARNING_LHS’ may be used uninitialized [-Wmaybe-uninitialized] 3637 | if(FIRST_WARNING_LHS) (void)fprintf(fp_stdout,"%s: INFO %s geopotential height extrapolated upward towards space using hypsometric equation with constant global mean virtual temperature = %g for variable %s\n",nco_prg_nm_get(),fnc_nm,tpt_vrt_avg,var_nm); | ^ nco_rgr.c:3521:20: note: ‘FIRST_WARNING_LHS’ was declared here 3521 | nco_bool FIRST_WARNING_LHS; /* [flg] First warning for LHS extrapolation */ | ^~~~~~~~~~~~~~~~~ nco_rgr.c:3715:23: warning: ‘FIRST_WARNING_RHS’ may be used uninitialized [-Wmaybe-uninitialized] 3715 | if(FIRST_WARNING_RHS) (void)fprintf(fp_stdout,"%s: INFO %s geopotential height extrapolated toward/into surface using hypsometric equation with constant global mean virtual temperature = %g for variable %s\n",nco_prg_nm_get(),fnc_nm,tpt_vrt_avg,var_nm); | ^ nco_rgr.c:3522:20: note: ‘FIRST_WARNING_RHS’ was declared here 3522 | nco_bool FIRST_WARNING_RHS; /* [flg] First warning for RHS extrapolation */ | ^~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_ini’: nco_rgr.c:552:9: warning: ‘cnv_nbr’ may be used uninitialized [-Wmaybe-uninitialized] 552 | if(cnv_nbr != 4) cnv_nbr=sscanf(rgr_lst[rgr_var_idx].val,"%lf,%lf,%lf,%lf",&rgr->lon_wst,&rgr->lon_est,&rgr->lat_sth,&rgr->lat_nrt); | ^ nco_rgr.c:264:7: note: ‘cnv_nbr’ was declared here 264 | int cnv_nbr; /* [nbr] Number of elements converted by sscanf() */ | ^~~~~~~ nco_rgr.c: In function ‘nco_lat_wgt_gss’: nco_rgr.c:7133:13: warning: ‘sp’ may be used uninitialized [-Wmaybe-uninitialized] 7133 | (void)fprintf(stdout,"%s: ERROR %s reports convergence only %g after %d iterations for lat_idx = %d\n",nco_prg_nm_get(),fnc_nm,fabs(sp),itr_nbr_max,lat_idx); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:7098:10: note: ‘sp’ was declared here 7098 | double sp; // Current iteration latitude increment | ^~ nco_rgr.c: In function ‘nco_sph_plg_area’: nco_rgr.c:7882:5: warning: ‘c_idx’ may be used uninitialized [-Wmaybe-uninitialized] 7882 | if(c_idx) c_idx=(long *)nco_free(c_idx); | ^ nco_rgr.c:7342:9: note: ‘c_idx’ was declared here 7342 | long *c_idx; /* [idx] Point C 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c:7881:5: warning: ‘b_idx’ may be used uninitialized [-Wmaybe-uninitialized] 7881 | if(b_idx) b_idx=(long *)nco_free(b_idx); | ^ nco_rgr.c:7341:9: note: ‘b_idx’ was declared here 7341 | long *b_idx; /* [idx] Point B 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c:7880:5: warning: ‘a_idx’ may be used uninitialized [-Wmaybe-uninitialized] 7880 | if(a_idx) a_idx=(long *)nco_free(a_idx); | ^ nco_rgr.c:7340:9: note: ‘a_idx’ was declared here 7340 | long *a_idx; /* [idx] Point A 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4145:113: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 4145 | if(nco_rgr_mth_typ == nco_rgr_mth_nil) (void)fprintf(stdout,"%s: WARNING %s reports map global attribute %s = %s does not match SCRIP/ESMF conventions that support only values of \"Conservative\" and \"Bilinear\" for this attribute. Proceeding anyway...\n",nco_prg_nm_get(),fnc_nm,cnv_sng,att_val); | ^~ nco_rgr.c:4376:29: warning: ‘lon_psn_src’ may be used uninitialized [-Wmaybe-uninitialized] 4376 | lon_nbr_in=dmn_sz_in_int[lon_psn_src]; | ^ nco_rgr.c:4273:7: note: ‘lon_psn_src’ was declared here 4273 | int lon_psn_src; /* [idx] Ordinal position of longitude in rectangular source grid dimension-size array */ | ^~~~~~~~~~~ nco_rgr.c:4377:29: warning: ‘lat_psn_src’ may be used uninitialized [-Wmaybe-uninitialized] 4377 | lat_nbr_in=dmn_sz_in_int[lat_psn_src]; | ^ nco_rgr.c:4274:7: note: ‘lat_psn_src’ was declared here 4274 | int lat_psn_src; /* [idx] Ordinal position of latitude in rectangular source grid dimension-size array */ | ^~~~~~~~~~~ In file included from /usr/include/stdio.h:980, from nco_rgr.h:19, from nco_rgr.c:10: In function ‘fprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4458:11: /usr/include/bits/stdio2.h:111:10: warning: ‘col_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4365:8: note: ‘col_nbr_in’ was declared here 4365 | long col_nbr_in; /* [idx] Number of columns in source grid */ | ^~~~~~~~~~ In function ‘fprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4458:11: /usr/include/bits/stdio2.h:111:10: warning: ‘lon_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4366:8: note: ‘lon_nbr_in’ was declared here 4366 | long lon_nbr_in; /* [idx] Number of longitudes in rectangular source grid */ | ^~~~~~~~~~ In function ‘fprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4458:11: /usr/include/bits/stdio2.h:111:10: warning: ‘lat_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4367:8: note: ‘lat_nbr_in’ was declared here 4367 | long lat_nbr_in; /* [idx] Number of latitudes in rectangular source grid */ | ^~~~~~~~~~ In function ‘fprintf’, inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4869:47: /usr/include/bits/stdio2.h:111:10: warning: ‘idx_max_dvn’ may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function ‘nco_rgr_wgt’: nco_rgr.c:4849:8: note: ‘idx_max_dvn’ was declared here 4849 | long idx_max_dvn; /* [idx] Index of maximum deviation from 1.0 */ | ^~~~~~~~~~~ nco_rgr.c:5572:9: warning: ‘bnd_nm_out’ may be used uninitialized [-Wmaybe-uninitialized] 5572 | if(!strcmp(bnd_nm_out,bnd_tm_nm_out)){ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:5502:9: note: ‘bnd_nm_out’ was declared here 5502 | char *bnd_nm_out; | ^~~~~~~~~~ nco_rgr.c:6948:32: warning: ‘tm_srt’ may be used uninitialized [-Wmaybe-uninitialized] 6948 | tm_drn=(float)(tm_end-tm_srt)/CLOCKS_PER_SEC; | ~~~~~~~^~~~~~~~ nco_rgr.c:6567:17: note: ‘tm_srt’ was declared here 6567 | clock_t tm_srt; /* [us] Microseconds at start */ | ^~~~~~ nco_rgr.c: In function ‘nco_grd_nfr’: nco_rgr.c:10775:7: warning: ‘lat_typ’ may be used uninitialized [-Wmaybe-uninitialized] 10775 | if(lat_typ == nco_grd_lat_nil){ | ^ nco_rgr.c:9358:23: note: ‘lat_typ’ was declared here 9358 | nco_grd_lat_typ_enm lat_typ; /* [enm] Latitude grid-type enum */ | ^~~~~~~ nco_rgr.c:9946:11: warning: ‘msk_unn.vp’ may be used uninitialized [-Wmaybe-uninitialized] 9946 | rcd=nco_get_vara(in_id,msk_id,dmn_srt,dmn_cnt,msk_unn.vp,msk_typ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:9364:11: note: ‘msk_unn.vp’ was declared here 9364 | ptr_unn msk_unn; | ^~~~~~~ nco_rgr.c:10762:51: warning: ‘lat_spn’ may be used uninitialized [-Wmaybe-uninitialized] 10762 | if(flg_s2n) lat_ctr_tst_fv=lat_ntf[0L]+lat_spn/(lat_nbr-1L); else lat_ctr_tst_fv=lat_ntf[0L]-lat_spn/(lat_nbr-1L); | ~~~~~~~^~~~~~~~~~~~~ nco_rgr.c:9255:10: note: ‘lat_spn’ was declared here 9255 | double lat_spn; /* [dgr] Latitude span */ | ^~~~~~~ nco_rgr.c: In function ‘nco_ntp_vrt’: nco_rgr.c:1127:9: warning: ‘ps_nm_tpl’ may be used uninitialized [-Wmaybe-uninitialized] 1127 | rcd=nco_inq_varid_flg(tpl_id,ps_nm_tpl,&ps_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:1093:9: note: ‘ps_nm_tpl’ was declared here 1093 | char *ps_nm_tpl; /* [sng] Surface pressure field name in template file */ | ^~~~~~~~~ nco_rgr.c:1429:15: warning: ‘mss_val_cmp_dbl’ may be used uninitialized [-Wmaybe-uninitialized] 1429 | if(lt_out[idx_ttl] != mss_val_cmp_dbl) lt_sum[idx_fst+grd_idx]+=lt_out[idx_ttl]; | ^ nco_rgr.c:1331:10: note: ‘mss_val_cmp_dbl’ was declared here 1331 | double mss_val_cmp_dbl; /* Missing value for comparison to double precision values */ | ^~~~~~~~~~~~~~~ nco_rgr.c:2622:26: warning: ‘dmn_nbr_out’ may be used uninitialized [-Wmaybe-uninitialized] 2622 | for(dmn_idx=0;dmn_idx, antlr::ASTRefCount, fmc_cls&, ncoTree&)’: fmc_all_cls.cc:1965:60: warning: ‘__snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] 1965 | snprintf(units_new_sng,NCO_MAX_LEN_DATE_SNG,"days since %d-01-01 00:00:00",lcl_tm_sct.year); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:980, from /usr/include/c++/14/cstdio:42, from /usr/include/c++/14/ext/string_conversions.h:45, from /usr/include/c++/14/bits/basic_string.h:4154, from /usr/include/c++/14/string:54, from fmc_all_cls.hh:14, from fmc_all_cls.cc:10: In function ‘snprintf’, inlined from ‘mth2_cls::fnd(antlr::ASTRefCount, antlr::ASTRefCount, fmc_cls&, ncoTree&)’ at fmc_all_cls.cc:1965:24: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 28 and 38 bytes into a destination of size 27 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fmc_all_cls.cc: In member function ‘bil_cls::fnd(antlr::ASTRefCount, antlr::ASTRefCount, fmc_cls&, ncoTree&)’: fmc_all_cls.cc:3794:19: warning: ‘var_arr’ may be used uninitialized [-Wmaybe-uninitialized] 3794 | in_typ=var_arr[0]->type; | ~~~~~~~~~^ fmc_all_cls.cc:3740:12: note: ‘var_arr’ declared here 3740 | var_sct *var_arr[6]; | ^~~~~~~ fmc_all_cls.cc:3798:31: warning: ‘var_arr’ may be used uninitialized [-Wmaybe-uninitialized] 3798 | var_arr[1]=nco_var_cnf_typ(in_typ,var_arr[1]); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ fmc_all_cls.cc:3740:12: note: ‘var_arr’ declared here 3740 | var_sct *var_arr[6]; | ^~~~~~~ fmc_all_cls.cc:3815:19: warning: ‘var_arr’ may be used uninitialized [-Wmaybe-uninitialized] 3815 | if(var_arr[1]->nbr_dim < 2) | ~~~~~~~~~^ fmc_all_cls.cc:3740:12: note: ‘var_arr’ declared here 3740 | var_sct *var_arr[6]; | ^~~~~~~ fmc_all_cls.cc: In member function ‘print_cls::fnd(antlr::ASTRefCount, antlr::ASTRefCount, fmc_cls&, ncoTree&)’: fmc_all_cls.cc:5634:15: warning: ‘strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 5634 | strncpy(var->val.cp,cp,sz); | ^ fmc_all_cls.cc:5630:17: note: length computed here 5630 | sz=strlen(cp); | ~~~~~~^~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o ncoTree.o ncoTree.cpp make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco++' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ../nco/libnco.la -lantlr -lgsl -lgslcblas -lm -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -lgsl -lgslcblas -lm libtool: link: g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o ../nco/.libs/libnco.so -L/usr/lib64 -lantlr -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco++' make[3]: Nothing to be done for 'all-am'. Making all in man make[2]: Nothing to be done for 'all'. Making all in doc make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/doc' restore=: && backupdir=".am$$" && \ am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \ rm -rf $backupdir && mkdir $backupdir && \ if (/bin/sh '/builddir/build/BUILD/nco-5.2.4/autobld/missing' makeinfo --version) >/dev/null 2>&1; then \ for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \ if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \ done; \ else :; fi && \ cd "$am__cwd"; \ if /bin/sh '/builddir/build/BUILD/nco-5.2.4/autobld/missing' makeinfo -I . \ -o nco.info nco.texi; \ then \ rc=0; \ CDPATH="${ZSH_VERSION+.}:" && cd .; \ else \ rc=$?; \ CDPATH="${ZSH_VERSION+.}:" && cd . && \ $restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \ fi; \ rm -rf $backupdir; exit $rc make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/doc' + make -C doc html pdf make: Entering directory '/builddir/build/BUILD/nco-5.2.4/doc' rm -rf nco.htp if /bin/sh '/builddir/build/BUILD/nco-5.2.4/autobld/missing' makeinfo --html --ifinfo --no-split -I . \ -o nco.htp nco.texi; \ then \ rm -rf nco.html && mv nco.htp nco.html; \ else \ rm -rf nco.htp; exit 1; \ fi TEXINPUTS="../autobld:$TEXINPUTS" \ MAKEINFO='/bin/sh '/builddir/build/BUILD/nco-5.2.4/autobld/missing' makeinfo -I .' \ texi2dvi --pdf --batch --build-dir=nco.t2p -o nco.pdf \ nco.texi This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.2.4/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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7235--7235 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (762.27116pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (204.64845pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (750.77379pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (584.06184pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (578.31316pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (101.17207pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (198.89977pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (101.17207pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (1020.96211pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 7270--7270 [][] [85] [86] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] [87] Overfull \hbox (26.43913pt too wide) in paragraph at lines 7419--7419 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 7419--7419 [][] Underfull \hbox (badness 10000) in paragraph at lines 7453--7461 []@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@ textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex trm '[] or [88] [89] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7636--7636 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7636--7636 [][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 7636--7636 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7636--7636 [][] [90] [91] [92] [93] [94] [95] Overfull \hbox (55.18257pt too wide) in paragraph at lines 8158--8158 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8158--8158 [][] [96] [97] [98] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8298--8298 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8357--8357 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] [99] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8362--8362 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8364--8364 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8383--8383 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8386--8386 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8387--8387 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8388--8388 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [100] [101] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8555--8555 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8555--8555 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8555--8555 [][] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9835--9835 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9835--9835 [][] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10527--10527 [][] [127] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10527--10527 [][] Underfull \hbox (badness 10000) in paragraph at lines 10529--10536 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [128] [129] [130] [131] Overfull \hbox (55.18257pt too wide) in paragraph at lines 10992--10992 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [132] [133] [134] [135] [136] [137] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11403--11403 [][] [138] [139] [140] [141] [142] [143] [144] [145] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12115--12115 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12122--12122 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [146] [147] [148] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12501--12501 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12502--12502 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12503--12503 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12504--12504 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12512--12512 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [150] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12554--12554 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [151] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12629--12629 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [152] [153] [154] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12817--12817 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [155] [156] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13017--13017 [][] [157] [158] Underfull \hbox (badness 6741) in paragraph at lines 13255--13300 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [159] [160] [161] [162] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13669--13690 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [163] [164] [165] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13754--13754 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [ --hdr_pad @textttsl nbr@texttt ] [--hpss][] [166] [167] [168] [169] [170] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14171--14171 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14174--14174 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [171] [172] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14331--14331 [][] [173] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14371--14371 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14388--14388 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [174] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14417--14417 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [175] [176] [177] [178] Overfull \hbox (118.41814pt too wide) in paragraph at lines 14690--14690 [][] [179] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14795--14795 [][] [180] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14814--14814 [][] [181] [182] Overfull \hbox (83.92601pt too wide) in paragraph at lines 14984--14984 [][] [183] Overfull \hbox (95.42339pt too wide) in paragraph at lines 15010--15010 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15021--15021 [][] [184] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15067--15067 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15067--15067 [][] [185] [186] [187] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15319--15319 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [188] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15461--15461 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [190] [191] Underfull \hbox (badness 10000) in paragraph at lines 15587--15596 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15606--15606 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15648--15648 [][] [192] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15648--15648 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 15648--15648 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15648--15648 [][] [193] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15739--15739 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15764--15764 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [195] [196] [197] Overfull \hbox (147.16158pt too wide) in paragraph at lines 15966--15966 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [198] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15983--15983 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [199] [200] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16124--16124 [][] [201] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16192--16192 [][] [202] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16261--16261 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16261--16261 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16273--16273 [][] [203] [204] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16400--16400 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16417--16417 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16450--16450 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [205] [206] [207] [208] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16734--16735 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16742--16743 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16746--16747 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16750--16751 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16754--16755 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16770--16771 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16775--16776 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16793--16793 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16794--16794 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16801--16801 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16826--16827 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 16905--16906 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 16906--16907 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 16907--16908 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 16908--16908 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 16908--16909 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 16917--16918 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 16926--16927 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 16927--16927 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 16929--16930 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 16930--16930 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 16991--16991 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [209] [210] [211] [212] [213] [214] [215] [216] Underfull \hbox (badness 10000) in paragraph at lines 17068--17070 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17081--17082 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17099--17100 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [217] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17124--17124 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17151--17151 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17151--17151 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17151--17151 [][] [218] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17167--17167 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17168--17168 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17169--17169 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17176--17176 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17177--17177 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17178--17178 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [219] [220] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17284--17284 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17286--17286 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [221] [222] [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 17809--17825 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [225] Underfull \hbox (badness 10000) in paragraph at lines 17869--17885 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 17955--17965 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [226] [227] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18168--18168 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18168--18168 [][] [228] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18250--18250 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18256--18256 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [229] [230] [231] [232] [233] [234] [235] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18883--18883 [][] [236] Overfull \hbox (20.69046pt too wide) in paragraph at lines 18938--18938 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [237] [238] [239] [240] [241] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19415--19415 [][] [242] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19435--19435 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 19439--19439 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n tv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 19442--19442 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19443--19443 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19492--19492 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [243] [244] [245] [246] [247] [248] [249] [250] [251] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20375--20375 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20376--20376 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [252] [253] [254] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20642--20642 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20644--20644 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20646--20646 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] [255] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20725--20725 [][] [256] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20770--20770 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [257] [258] Underfull \hbox (badness 10000) in paragraph at lines 20944--20944 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 20945--20945 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 20975--20975 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 20981--20981 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20982--20982 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] [259] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] [260] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21121--21121 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21128--21128 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21130--21130 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [261] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21198--21198 [][] [262] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21204--21204 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21231--21231 [][] [263] [264] [265] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21458--21458 [][] [266] [267] [268] [269] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21769--21769 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21775--21775 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] Underfull \hbox (badness 10000) in paragraph at lines 21776--21776 []@texttt [-O] [-o @textttsl output- [270] [271] [272] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22015--22015 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [273] [274] [275] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22287--22287 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [276] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22334--22334 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22335--22335 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 22340--22340 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz @textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] [277] [278] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22541--22541 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22542--22542 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22545--22545 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22546--22546 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [279] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22630--22630 []@texttt 1964-03-13T21:09:0.000000[] [280] [281] Overfull \hbox (72.75797pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 22750--22750 [][] [282] Overfull \hbox (204.97778pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22813--22813 [][] [283] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 22932--22932 [][] [284] Overfull \hbox (164.73697pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] [285] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23095--23095 [][] [286] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23163--23163 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23163--23163 [][] [287] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23291--23291 [][] [288] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23312--23312 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23326--23326 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23327--23327 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23328--23328 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23329--23329 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23330--23330 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23331--23331 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23332--23332 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [289] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23417--23417 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [290] [291] Overfull \hbox (549.89905pt too wide) in paragraph at lines 23530--23530 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 23530--23530 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23560--23560 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 23560--23560 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23560--23560 [][] [292] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23625--23625 [][] [293] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23664--23664 [][] [294] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23828--23828 [][] [295] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23910--23910 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23913--23913 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23918--23918 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [296] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24057--24057 [][] [297] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24100--24100 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24100--24100 [][] Underfull \hbox (badness 10000) in paragraph at lines 24115--24130 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24148--24148 [][] [298] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24223--24223 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24236--24236 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24244--24244 [][] [299] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (986.46999pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] [300] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24346--24346 [][] [301] Overfull \hbox (26.43913pt too wide) in paragraph at lines 24426--24426 []@texttt # Change values to be sure original values are not copied in followi ng step[] [302] [303] [304] Overfull \hbox (32.18784pt too wide) in paragraph at lines 24647--24647 []@texttt [-R] [-r] [--ram_all] [-t @textttsl thr_nbr@texttt ] [-U] [--unn] [- v @textttsl var@texttt [,[]]] [-X ...] [-x][] [305] [306] Underfull \hbox (badness 10000) in paragraph at lines 24841--24846 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [307] Underfull \hbox (badness 10000) in paragraph at lines 24847--24853 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [308] [309] [310] [311] [312] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25228--25228 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25241--25241 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [313] Underfull \hbox (badness 10000) in paragraph at lines 25297--25297 []@texttt [-O] [-o @textttsl output- [314] [315] [316] [317] Underfull \hbox (badness 10000) in paragraph at lines 25616--25616 []@texttt [-O] [-o @textttsl output- [318] [319] Overfull \hbox (14.94176pt too wide) in paragraph at lines 25746--25746 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 25751--25751 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--mpt_mss] [--msh_fl=@textttsl msh_ fl@texttt ][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 25752--25752 []@texttt [--msk_apl] [--msk_dst=@textttsl msk_dst@texttt ] [--msk_out=@texttt sl msk_out@texttt ] [--msk_src=@textttsl msk_src@texttt ] [--mss_val=@textttsl mss_val@texttt ][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 25754--25754 []@texttt [--no_add_fll] [--no_cll_msr] [--no_frm_trm] [--no_permute] [--no_st din] [--no_stg_grd][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 25764--25764 []@texttt [--vrt_in=@textttsl vrt_fl@texttt ] [--vrt_out=@textttsl vrt_fl@text tt ] [--vrt_nm=@textttsl vrt_nm@texttt ] [--vrt_ntp=@textttsl vrt_ntp@texttt ] [--vrt_xtr=@textttsl vrt_xtr@texttt ][] [320] [321] Underfull \hbox (badness 6741) in paragraph at lines 26023--26034 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [322] [323] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26309--26309 [][] [324] Underfull \hbox (badness 10000) in paragraph at lines 26412--26414 []@reducedrm MOAB[] [325] Underfull \hbox (badness 10000) in paragraph at lines 26415--26420 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26424--26426 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26427--26429 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 26427--26429 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26430--26432 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26433--26435 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26433--26435 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [326] [327] [328] Overfull \hbox (107.25009pt too wide) in paragraph at lines 26605--26605 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 26605--26605 [][] Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. 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too wide) in paragraph at lines 27435--27435 [][] [337] [338] [339] Overfull \hbox (684.99643pt too wide) in paragraph at lines 27726--27785 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers,nBio LayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers,maxEdges,MaxEdges2,nCateg ories,R3,ONE,TWO,FOUR,nEdges,nCells[]@textrm , [340] Overfull \hbox (15.27109pt too wide) in paragraph at lines 27841--27841 [][] [341] Overfull \hbox (15.27109pt too wide) in paragraph at lines 27864--27864 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27864--27864 [][] [342] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27942--27942 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 27989--27989 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27989--27989 [][] [343] [344] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28107--28107 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull 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10000) in paragraph at lines 30074--30074 []@texttt [-O] [-o @textttsl output- [369] [370] [371] [372] Chapter 5 [373] [374] [375] [376] [377] Chapter 6 [378] [379] Chapter 7 [380] (/builddir/build/BUILD/nco-5.2.4/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [381] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [382] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/cmb_fl_grp.sh [383] Overfull \hbox (32.18782pt too wide) in paragraph at lines 36--36 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 49--49 [][] [384] Overfull \hbox (43.6852pt too wide) in paragraph 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at lines 68--68 [][] [398] Overfull \hbox (43.6852pt too wide) in paragraph at lines 71--71 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 76--76 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 77--77 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/mcc_grp.sh [399]) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/rgr.sh [400] Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 6--6 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10--10 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 27--27 [][][][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 28--28 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 33--33 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 37--37 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/bi_interp.nco [401] Overfull \hbox (14.94176pt too wide) in paragraph at lines 34--34 [][][][] [402] Overfull \hbox (20.69044pt too wide) in paragraph at lines 61--61 [][][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/add_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 5--5 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 6--6 [][][][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 8--8 [][][] [403] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [404] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [405] [406] Overfull \hbox (60.93126pt too wide) in paragraph at lines 31437--31437 [][] Chapter 9 [407] [408] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] [409] [410] [411] [412] Overfull \hbox (37.93651pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 31747--31747 [][] [413] Overfull \hbox (693.28691pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] [414] Chapter 10 [415] [416] (General Index) [417] [418] [419] [420] ) (see the transcript file for additional information) Output written on nco.pdf (424 pages, 1752965 bytes). Transcript written on nco.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.2.4/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (./nco.aux) (/builddir/build/BUILD/nco-5.2.4/doc/my-bib-macros.texi) [1{/var/lib/texmf/font s/map/pdftex/updmap/pdftex.map}] [2] (./nco.toc [-1] [-2] [-3] [-4]) [-5] [-6] (./nco.toc) (./nco.toc) (Foreword) [1] [2] (Summary) [3] [4] Chapter 1 [5] [6] [7] [8] [9] [10] [11] [12] [13] Overfull \hbox (32.18782pt too wide) in paragraph at lines 1427--1427 []@texttt ncks fl.hdf fl.nc # Convert HDF4->netCDF4 (NCO 4.4.0+, netCDF 4.3.1+)[] [14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] Chapter 3 [27] [28] [29] [30] [31] [32] Overfull \hbox (55.18257pt too wide) in paragraph at lines 3118--3118 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3146--3146 [][] [33] [34] [35] [36] [37] [38] [39] [40] Overfull \hbox (233.39189pt too wide) in paragraph at lines 3897--3897 []@texttt http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/ncep.reanalysis. dailyavgs/surface/pres.sfc.1969.nc ~/foo.nc[] [41] Overfull \hbox (382.85777pt too wide) in paragraph at lines 3943--3943 []@texttt ncks -v Time -d Time,0,10,2 http://eosdap.hdfgroup.uiuc.edu:8080/ope ndap/data/NASAFILES/hdf5/BUV-Nimbus04_L3zm_v01-00-2012m0203t144121.h5[] Overfull \hbox (658.79478pt too wide) in paragraph at lines 3945--3945 []@texttt ncks -O -D 1 -d time,1 -d lev,0 -d lat,0,100,10 -d lon,0,100,10 -v u _velocity http://nomads.ncep.noaa.gov:9090/dods/rtofs/rtofs_global20140303/rtof s_glo_2ds_forecast_daily_prog ~/foo.nc[] [42] Overfull \hbox (95.42339pt too wide) in paragraph at lines 4018--4018 []@texttt http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/ncep.reanalysis. dailyavgs/surface \[] [43] [44] [45] [46] Overfull \hbox (37.93651pt too wide) in paragraph at lines 4422--4422 []@texttt # Convert file with groups, multiple record dimensions + netCDF4 ato mic types[] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] Overfull \hbox (20.69044pt too wide) in paragraph at lines 5315--5315 []@texttt ncks -O -G : -g cesm -3 ~/nco/data/cmip5.nc ~/cesm.nc # Extract /ces m to /[] [58] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 5470--5470 [][] [59] Overfull \hbox (509.3289pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (262.13533pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5470--5470 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5470--5470 [][] Overfull 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6202--6208 []@textrm Long op-tions: `@texttt --mro[]@textrm '[] `@texttt --dimension [71] Overfull \hbox (20.69044pt too wide) in paragraph at lines 6266--6266 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 6266--6266 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 6318--6318 []@texttt ncra -O -d time,1850-03-01T00:00:01,,8760,744,24 -n 150,4,1 1850.nc clm_drn.nc[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Overfull \hbox (176.23434pt too wide) in paragraph at lines 7089--7089 [][] Overfull \hbox (72.75797pt too wide) in paragraph at lines 7089--7089 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7235--7235 [][] [82] Overfull \hbox (32.18782pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox 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wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (267.88402pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (262.13533pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (101.17207pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (175.90501pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (302.37614pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (951.97786pt too wide) in paragraph at lines 7235--7235 [][] [84] Overfull \hbox (106.92076pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (951.97786pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (762.27116pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (204.64845pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (750.77379pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (584.06184pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (578.31316pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (101.17207pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (198.89977pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (101.17207pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (1020.96211pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 7270--7270 [][] [85] [86] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] [87] Overfull \hbox (26.43913pt too wide) in paragraph at lines 7419--7419 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 7419--7419 [][] Underfull \hbox (badness 10000) in paragraph at lines 7453--7461 []@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@ textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex trm '[] or [88] [89] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7636--7636 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 7636--7636 [][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 7636--7636 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7636--7636 [][] [90] [91] [92] [93] [94] [95] Overfull \hbox (55.18257pt too wide) in paragraph at lines 8158--8158 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8158--8158 [][] [96] [97] [98] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8298--8298 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8357--8357 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] [99] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8362--8362 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8364--8364 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8383--8383 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8386--8386 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8387--8387 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8388--8388 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [100] [101] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8555--8555 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8555--8555 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8555--8555 [][] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9835--9835 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9835--9835 [][] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10527--10527 [][] [127] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10527--10527 [][] Underfull \hbox (badness 10000) in paragraph at lines 10529--10536 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [128] [129] [130] [131] Overfull \hbox (55.18257pt too wide) in paragraph at lines 10992--10992 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [132] [133] [134] [135] [136] [137] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11403--11403 [][] [138] [139] [140] [141] [142] [143] [144] [145] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12115--12115 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12122--12122 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [146] [147] [148] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12501--12501 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12502--12502 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12503--12503 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12504--12504 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12512--12512 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [150] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12554--12554 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [151] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12629--12629 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [152] [153] [154] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12817--12817 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [155] [156] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13017--13017 [][] 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paragraph at lines 15587--15596 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15606--15606 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15648--15648 [][] [192] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15648--15648 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 15648--15648 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15648--15648 [][] [193] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15739--15739 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15764--15764 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [195] [196] [197] Overfull \hbox (147.16158pt too wide) in paragraph at lines 15966--15966 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [198] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15983--15983 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [199] [200] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16124--16124 [][] [201] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16192--16192 [][] [202] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16261--16261 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16261--16261 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16273--16273 [][] [203] [204] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16400--16400 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16417--16417 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16450--16450 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [205] [206] [207] [208] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16734--16735 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16742--16743 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16746--16747 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16750--16751 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16754--16755 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16770--16771 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16775--16776 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16793--16793 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16794--16794 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16801--16801 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16826--16827 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 16905--16906 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 16906--16907 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 16907--16908 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 16908--16908 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 16908--16909 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 16917--16918 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 16926--16927 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 16927--16927 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 16929--16930 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 16930--16930 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 16991--16991 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [209] [210] [211] [212] [213] [214] [215] [216] Underfull \hbox (badness 10000) in paragraph at lines 17068--17070 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17081--17082 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17099--17100 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [217] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17124--17124 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17151--17151 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17151--17151 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17151--17151 [][] [218] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17167--17167 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17168--17168 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17169--17169 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17176--17176 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17177--17177 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17178--17178 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [219] [220] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17284--17284 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17286--17286 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [221] [222] [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 17809--17825 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [225] Underfull \hbox (badness 10000) in paragraph at lines 17869--17885 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 17955--17965 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [226] [227] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18168--18168 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18168--18168 [][] [228] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18250--18250 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18256--18256 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [229] [230] [231] [232] [233] [234] [235] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18883--18883 [][] [236] Overfull \hbox (20.69046pt too wide) in paragraph at lines 18938--18938 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [237] [238] [239] [240] [241] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19415--19415 [][] [242] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19435--19435 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 19439--19439 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n tv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 19442--19442 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19443--19443 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19492--19492 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [243] [244] [245] [246] [247] [248] [249] [250] [251] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20375--20375 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20376--20376 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [252] [253] [254] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20642--20642 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20644--20644 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20646--20646 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] [255] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20725--20725 [][] [256] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20770--20770 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [257] [258] Underfull \hbox (badness 10000) in paragraph at lines 20944--20944 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 20945--20945 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 20975--20975 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 20981--20981 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20982--20982 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] [259] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] [260] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21121--21121 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21128--21128 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21130--21130 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [261] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21198--21198 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21204--21204 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] [262] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21231--21231 [][] [263] [264] [265] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21458--21458 [][] [266] [267] [268] [269] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21769--21769 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21775--21775 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] Underfull \hbox (badness 10000) in paragraph at lines 21776--21776 []@texttt [-O] [-o @textttsl output- [270] [271] [272] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22015--22015 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [273] [274] [275] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22287--22287 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [276] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22334--22334 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22335--22335 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 22340--22340 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz @textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] [277] [278] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22541--22541 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22542--22542 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22545--22545 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22546--22546 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [279] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22630--22630 []@texttt 1964-03-13T21:09:0.000000[] [280] [281] Overfull \hbox (72.75797pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 22750--22750 [][] [282] Overfull \hbox (204.97778pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22813--22813 [][] [283] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 22932--22932 [][] [284] Overfull \hbox (164.73697pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] [285] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23095--23095 [][] [286] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23163--23163 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23163--23163 [][] [287] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23291--23291 [][] [288] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23312--23312 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23326--23326 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23327--23327 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23328--23328 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23329--23329 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23330--23330 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23331--23331 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23332--23332 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [289] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23417--23417 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [290] [291] Overfull \hbox (549.89905pt too wide) in paragraph at lines 23530--23530 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 23530--23530 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23560--23560 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 23560--23560 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23560--23560 [][] [292] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23625--23625 [][] [293] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23664--23664 [][] [294] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23828--23828 [][] [295] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23910--23910 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23913--23913 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23918--23918 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [296] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24057--24057 [][] [297] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24100--24100 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24100--24100 [][] Underfull \hbox (badness 10000) in paragraph at lines 24115--24130 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24148--24148 [][] [298] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24223--24223 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24236--24236 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24244--24244 [][] [299] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (986.46999pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] [300] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24346--24346 [][] [301] Overfull \hbox (26.43913pt too wide) in paragraph at lines 24426--24426 []@texttt # Change values to be sure original values are not copied in followi ng step[] [302] [303] [304] Overfull \hbox (32.18784pt too wide) in paragraph at lines 24647--24647 []@texttt [-R] [-r] [--ram_all] [-t @textttsl thr_nbr@texttt ] [-U] [--unn] [- v @textttsl var@texttt [,[]]] [-X ...] [-x][] [305] [306] Underfull \hbox (badness 10000) in paragraph at lines 24841--24846 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [307] Underfull \hbox (badness 10000) in paragraph at lines 24847--24853 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [308] [309] [310] [311] [312] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25228--25228 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25241--25241 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [313] Underfull \hbox (badness 10000) in paragraph at lines 25297--25297 []@texttt [-O] [-o @textttsl output- [314] [315] [316] [317] Underfull \hbox (badness 10000) in paragraph at lines 25616--25616 []@texttt [-O] [-o @textttsl output- [318] [319] Overfull \hbox (14.94176pt too wide) in paragraph at lines 25746--25746 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 25751--25751 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--mpt_mss] [--msh_fl=@textttsl msh_ fl@texttt ][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 25752--25752 []@texttt [--msk_apl] [--msk_dst=@textttsl msk_dst@texttt ] [--msk_out=@texttt sl msk_out@texttt ] [--msk_src=@textttsl msk_src@texttt ] [--mss_val=@textttsl mss_val@texttt ][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 25754--25754 []@texttt [--no_add_fll] [--no_cll_msr] [--no_frm_trm] [--no_permute] [--no_st din] [--no_stg_grd][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 25764--25764 []@texttt [--vrt_in=@textttsl vrt_fl@texttt ] [--vrt_out=@textttsl vrt_fl@text tt ] [--vrt_nm=@textttsl vrt_nm@texttt ] [--vrt_ntp=@textttsl vrt_ntp@texttt ] [--vrt_xtr=@textttsl vrt_xtr@texttt ][] [320] [321] Underfull \hbox (badness 6741) in paragraph at lines 26023--26034 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [322] [323] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26309--26309 [][] [324] Underfull \hbox (badness 10000) in paragraph at lines 26412--26414 []@reducedrm MOAB[] [325] Underfull \hbox (badness 10000) in paragraph at lines 26415--26420 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26424--26426 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26427--26429 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 26427--26429 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26430--26432 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26433--26435 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26433--26435 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [326] [327] [328] Overfull \hbox (107.25009pt too wide) in paragraph at lines 26605--26605 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 26605--26605 [][] Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 26620--26640 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . Overfull \hbox (44.01453pt too wide) in paragraph at lines 26657--26657 [][] [329] [330] [331] [332] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27087--27087 [][] [333] [334] [335] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27326--27326 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27326--27326 [][] [336] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27399--27399 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27435--27435 [][] [337] [338] [339] Overfull \hbox (684.99643pt too wide) in paragraph at lines 27726--27785 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers,nBio LayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers,maxEdges,MaxEdges2,nCateg ories,R3,ONE,TWO,FOUR,nEdges,nCells[]@textrm , [340] Overfull \hbox (15.27109pt too wide) in paragraph at lines 27841--27841 [][] [341] Overfull \hbox (15.27109pt too wide) in paragraph at lines 27864--27864 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27864--27864 [][] [342] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27942--27942 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 27989--27989 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27989--27989 [][] [343] [344] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28107--28107 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 28123--28123 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [345] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28245--28245 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28246--28246 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [346] [347] [348] [349] [350] [351] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28760--28760 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 28762--28762 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [352] [353] Overfull \hbox (21.01978pt too wide) in paragraph at lines 28949--28949 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 28949--28949 [][] Overfull \hbox (44.01453pt too wide) in paragraph at lines 28949--28949 [][] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29012--29012 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29021--29021 [][] [354] Overfull \hbox (26.76846pt too wide) in paragraph at lines 29034--29034 [][] [355] Underfull \hbox (badness 10000) in paragraph at lines 29155--29155 []@texttt ncremap --vrt_in=vrt.nc -- Underfull \hbox (badness 10000) in paragraph at lines 29156--29156 []@texttt ncremap --vrt_in=vrt.nc -- [356] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29186--29186 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29187--29187 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] [357] [358] Overfull \hbox (55.18257pt too wide) in paragraph at lines 29377--29377 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 29378--29378 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [359] [360] [361] [362] [363] [364] [365] Overfull \hbox (187.40239pt too wide) in paragraph at lines 29930--29930 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 29930--29930 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 29942--29942 [][] [366] Overfull \hbox (216.14583pt too wide) in paragraph at lines 29971--29971 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 29990--29990 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 29990--29990 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 29990--29990 [][] [367] [368] Overfull \hbox (49.4339pt too wide) in paragraph at lines 30071--30071 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] Underfull \hbox (badness 10000) in paragraph at lines 30074--30074 []@texttt [-O] [-o @textttsl output- [369] [370] [371] [372] Chapter 5 [373] [374] [375] [376] [377] Chapter 6 [378] [379] Chapter 7 [380] (/builddir/build/BUILD/nco-5.2.4/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [381] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [382] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/cmb_fl_grp.sh [383] Overfull \hbox (32.18782pt too wide) in paragraph at lines 36--36 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 49--49 [][] [384] Overfull \hbox (43.6852pt too wide) in paragraph 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(/builddir/build/BUILD/nco-5.2.4/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [404] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [405] [406] Overfull \hbox (60.93126pt too wide) in paragraph at lines 31437--31437 [][] Chapter 9 [407] [408] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] [409] [410] [411] [412] Overfull \hbox (37.93651pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 31747--31747 [][] [413] Overfull \hbox (693.28691pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] [414] Chapter 10 [415] [416] (General Index) [417] [418] (./nco.cps [419] Overfull \hbox (37.49283pt too wide) in paragraph at lines 144--144 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] Overfull \hbox (32.76788pt too wide) in paragraph at lines 153--153 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [420] [421] [422] [423] [424] Overfull \hbox (37.49283pt too wide) in paragraph at lines 756--756 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [425] [426] [427] [428] [429] [430] [431] [432] [433] [434] [435] [436] [437] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2134--2134 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2140--2140 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [438] [439] [440]) [441] [442] ) (see the transcript file for additional information) Output written on nco.pdf (450 pages, 2033432 bytes). Transcript written on nco.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.2.4/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (./nco.aux) (/builddir/build/BUILD/nco-5.2.4/doc/my-bib-macros.texi) [1{/var/lib/texmf/font s/map/pdftex/updmap/pdftex.map}] [2] (./nco.toc [-1] [-2] [-3] [-4]) [-5] [-6] (./nco.toc) (./nco.toc) (Foreword) [1] [2] (Summary) [3] [4] Chapter 1 [5] [6] [7] [8] [9] [10] [11] [12] [13] Overfull \hbox (32.18782pt too wide) in paragraph at lines 1427--1427 []@texttt ncks fl.hdf fl.nc # Convert HDF4->netCDF4 (NCO 4.4.0+, netCDF 4.3.1+)[] [14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] Chapter 3 [27] [28] [29] [30] [31] [32] Overfull \hbox (55.18257pt too wide) in paragraph at lines 3118--3118 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3146--3146 [][] [33] [34] [35] [36] [37] [38] [39] [40] Overfull \hbox (233.39189pt too wide) in paragraph at lines 3897--3897 []@texttt http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/ncep.reanalysis. dailyavgs/surface/pres.sfc.1969.nc ~/foo.nc[] [41] Overfull \hbox (382.85777pt too wide) in paragraph at lines 3943--3943 []@texttt ncks -v Time -d Time,0,10,2 http://eosdap.hdfgroup.uiuc.edu:8080/ope ndap/data/NASAFILES/hdf5/BUV-Nimbus04_L3zm_v01-00-2012m0203t144121.h5[] Overfull \hbox (658.79478pt too wide) in paragraph at lines 3945--3945 []@texttt ncks -O -D 1 -d time,1 -d lev,0 -d lat,0,100,10 -d lon,0,100,10 -v u _velocity http://nomads.ncep.noaa.gov:9090/dods/rtofs/rtofs_global20140303/rtof s_glo_2ds_forecast_daily_prog ~/foo.nc[] [42] Overfull \hbox (95.42339pt too wide) in paragraph at lines 4018--4018 []@texttt http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/ncep.reanalysis. dailyavgs/surface \[] [43] [44] [45] [46] Overfull \hbox (37.93651pt too wide) in paragraph at lines 4422--4422 []@texttt # Convert file with groups, multiple record dimensions + netCDF4 ato mic types[] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] Overfull \hbox (20.69044pt too wide) in paragraph at lines 5315--5315 []@texttt ncks -O -G : -g cesm -3 ~/nco/data/cmip5.nc ~/cesm.nc # Extract /ces m to 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7235--7235 [][] Overfull \hbox (1020.96211pt too wide) in paragraph at lines 7235--7235 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 7270--7270 [][] [85] [86] Overfull \hbox (95.42339pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 7390--7390 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 7390--7390 [][] [87] Overfull \hbox (26.43913pt too wide) in paragraph at lines 7419--7419 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 7419--7419 [][] Underfull \hbox (badness 10000) in paragraph at lines 7453--7461 []@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@ textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl 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[106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9835--9835 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9835--9835 [][] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10527--10527 [][] [127] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10527--10527 [][] Underfull \hbox (badness 10000) in paragraph at lines 10529--10536 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [128] [129] [130] [131] Overfull \hbox (55.18257pt too wide) in paragraph at lines 10992--10992 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [132] [133] [134] [135] [136] [137] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11403--11403 [][] [138] [139] [140] [141] [142] [143] [144] [145] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12115--12115 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12122--12122 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [146] [147] [148] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12501--12501 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12502--12502 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12503--12503 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12504--12504 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12512--12512 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [150] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12554--12554 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [151] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12629--12629 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [152] [153] [154] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12817--12817 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [155] [156] Overfull \hbox (112.66945pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 13017--13017 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 13017--13017 [][] 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\hbox (20.69044pt too wide) in paragraph at lines 14171--14171 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14174--14174 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [171] [172] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14331--14331 [][] [173] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14371--14371 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14388--14388 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [174] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14417--14417 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [175] [176] [177] [178] Overfull \hbox (118.41814pt too wide) in paragraph at lines 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paragraph at lines 15587--15596 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15606--15606 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15648--15648 [][] [192] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15648--15648 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 15648--15648 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15648--15648 [][] [193] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15739--15739 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15764--15764 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [195] [196] [197] Overfull \hbox (147.16158pt too wide) in paragraph at lines 15966--15966 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [198] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15983--15983 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [199] [200] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16116--16116 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16124--16124 [][] [201] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16192--16192 [][] [202] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16261--16261 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16261--16261 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16273--16273 [][] [203] [204] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16400--16400 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16417--16417 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16450--16450 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [205] [206] [207] [208] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16734--16735 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16742--16743 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16746--16747 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16750--16751 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16754--16755 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16770--16771 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16775--16776 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16793--16793 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16794--16794 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16801--16801 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16826--16827 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 16905--16906 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 16906--16907 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull 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in paragraph at lines 16930--16930 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 16991--16991 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [209] [210] [211] [212] [213] [214] [215] [216] Underfull \hbox (badness 10000) in paragraph at lines 17068--17070 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17081--17082 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17099--17100 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [217] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17124--17124 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17151--17151 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17151--17151 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17151--17151 [][] [218] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17167--17167 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17168--17168 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17169--17169 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17176--17176 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17177--17177 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17178--17178 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [219] [220] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17284--17284 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17286--17286 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [221] [222] [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 17809--17825 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [225] Underfull \hbox (badness 10000) in paragraph at lines 17869--17885 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 17955--17965 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [226] [227] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18168--18168 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18168--18168 [][] [228] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18250--18250 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18256--18256 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [229] [230] [231] [232] [233] [234] [235] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18883--18883 [][] [236] Overfull \hbox (20.69046pt too wide) in paragraph at lines 18938--18938 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [237] [238] [239] [240] [241] Overfull \hbox (49.43388pt too wide) in paragraph at lines 19415--19415 [][] [242] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19435--19435 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 19439--19439 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n tv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 19442--19442 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19443--19443 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19492--19492 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [243] [244] [245] [246] [247] [248] [249] [250] [251] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20375--20375 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20376--20376 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [252] [253] [254] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20642--20642 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20644--20644 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20646--20646 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] [255] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20725--20725 [][] [256] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20770--20770 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [257] [258] Underfull \hbox (badness 10000) in paragraph at lines 20944--20944 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 20945--20945 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - Overfull \hbox (20.69044pt too wide) in paragraph at lines 20975--20975 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 20981--20981 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20982--20982 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] [259] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21019--21019 [][] [260] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21121--21121 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21128--21128 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21130--21130 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [261] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21198--21198 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21204--21204 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] [262] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21231--21231 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21231--21231 [][] [263] [264] [265] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21458--21458 [][] [266] [267] [268] [269] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21769--21769 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21775--21775 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] Underfull \hbox (badness 10000) in paragraph at lines 21776--21776 []@texttt [-O] [-o @textttsl output- [270] [271] [272] Overfull \hbox (20.69044pt too wide) in paragraph at lines 22015--22015 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [273] [274] [275] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22287--22287 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [276] Overfull \hbox (106.92076pt too wide) in paragraph at lines 22334--22334 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [- -chk_nan] [--chk_xtn][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 22335--22335 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 22340--22340 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz @textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] [277] [278] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22541--22541 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22542--22542 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at lines 22545--22545 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n c[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 22546--22546 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only [] [279] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22630--22630 []@texttt 1964-03-13T21:09:0.000000[] [280] [281] Overfull \hbox (72.75797pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 22750--22750 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 22750--22750 [][] [282] Overfull \hbox (204.97778pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 22813--22813 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22813--22813 [][] [283] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (170.48566pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (38.26584pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22892--22892 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (164.73697pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 22932--22932 [][] [284] Overfull \hbox (164.73697pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (118.74747pt too wide) in paragraph at lines 22932--22932 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22932--22932 [][] [285] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (181.98303pt too wide) in paragraph at lines 23027--23027 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (130.24484pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (256.71597pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23063--23063 [][] Overfull \hbox (199.2291pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (245.2186pt too wide) in paragraph at lines 23095--23095 [][] Overfull \hbox (279.71072pt too wide) in paragraph at lines 23095--23095 [][] [286] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 23127--23127 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23163--23163 [][] Overfull \hbox (153.2396pt too wide) in paragraph at lines 23163--23163 [][] [287] Overfull \hbox (147.4909pt too wide) in paragraph at lines 23291--23291 [][] [288] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23312--23312 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23326--23326 []@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23327--23327 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23328--23328 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23329--23329 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23330--23330 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23331--23331 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23332--23332 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] [289] Overfull \hbox (61.26059pt too wide) in paragraph at lines 23417--23417 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out .nc[] [290] [291] Overfull \hbox (549.89905pt too wide) in paragraph at lines 23530--23530 [][] Overfull \hbox (463.66873pt too wide) in paragraph at lines 23530--23530 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23560--23560 [][] Overfull \hbox (94.43918pt too wide) in paragraph at lines 23560--23560 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23560--23560 [][] [292] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (71.44443pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23625--23625 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23625--23625 [][] [293] Overfull \hbox (123.18262pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (111.68524pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (232.40768pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (261.15112pt too wide) in paragraph at lines 23664--23664 [][] Overfull \hbox (151.92606pt too wide) in paragraph at lines 23664--23664 [][] [294] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23828--23828 [][] [295] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23910--23910 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0. 123456789[] Overfull \hbox (193.48041pt too wide) in paragraph at lines 23913--23913 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567, 0.12345678, 0.123456789 ;[] Overfull \hbox (78.50665pt too wide) in paragraph at lines 23918--23918 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0 .123 ;[] [296] Overfull \hbox (78.50665pt too wide) in paragraph at lines 24057--24057 [][] [297] Overfull \hbox (147.4909pt too wide) in paragraph at lines 24100--24100 [][] Overfull \hbox (285.45941pt too wide) in paragraph at lines 24100--24100 [][] Underfull \hbox (badness 10000) in paragraph at lines 24115--24130 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc edrm NcML[] @textrm out-put: Overfull \hbox (44.01453pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 24148--24148 [][] [298] Overfull \hbox (26.76846pt too wide) in paragraph at lines 24148--24148 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 24223--24223 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/ /' | sort[] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24236--24236 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" | cut -f 11- -d ' ' | sort[] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24244--24244 [][] [299] Overfull \hbox (262.13533pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (313.87352pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (986.46999pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (170.15633pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (256.38664pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] [300] Overfull \hbox (371.3604pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (164.40764pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (377.10909pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (244.88927pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (221.89452pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 24346--24346 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 24346--24346 [][] [301] Overfull \hbox (26.43913pt too wide) in paragraph at lines 24426--24426 []@texttt # Change values to be sure original values are not copied in followi ng step[] [302] [303] [304] Overfull \hbox (32.18784pt too wide) in paragraph at lines 24647--24647 []@texttt [-R] [-r] [--ram_all] [-t @textttsl thr_nbr@texttt ] [-U] [--unn] [- v @textttsl var@texttt [,[]]] [-X ...] [-x][] [305] [306] Underfull \hbox (badness 10000) in paragraph at lines 24841--24846 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[], [307] Underfull \hbox (badness 10000) in paragraph at lines 24847--24853 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [308] [309] [310] [311] [312] Overfull \hbox (55.18257pt too wide) in paragraph at lines 25228--25228 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25241--25241 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [313] Underfull \hbox (badness 10000) in paragraph at lines 25297--25297 []@texttt [-O] [-o @textttsl output- [314] [315] [316] [317] Underfull \hbox (badness 10000) in paragraph at lines 25616--25616 []@texttt [-O] [-o @textttsl output- [318] [319] Overfull \hbox (14.94176pt too wide) in paragraph at lines 25746--25746 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 25751--25751 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--mpt_mss] [--msh_fl=@textttsl msh_ fl@texttt ][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 25752--25752 []@texttt [--msk_apl] [--msk_dst=@textttsl msk_dst@texttt ] [--msk_out=@texttt sl msk_out@texttt ] [--msk_src=@textttsl msk_src@texttt ] [--mss_val=@textttsl mss_val@texttt ][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 25754--25754 []@texttt [--no_add_fll] [--no_cll_msr] [--no_frm_trm] [--no_permute] [--no_st din] [--no_stg_grd][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 25764--25764 []@texttt [--vrt_in=@textttsl vrt_fl@texttt ] [--vrt_out=@textttsl vrt_fl@text tt ] [--vrt_nm=@textttsl vrt_nm@texttt ] [--vrt_ntp=@textttsl vrt_ntp@texttt ] [--vrt_xtr=@textttsl vrt_xtr@texttt ][] [320] [321] Underfull \hbox (badness 6741) in paragraph at lines 26023--26034 @texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n EdgesOnCell[]@textrm , [322] [323] Overfull \hbox (67.00928pt too wide) in paragraph at lines 26309--26309 [][] [324] Underfull \hbox (badness 10000) in paragraph at lines 26412--26414 []@reducedrm MOAB[] [325] Underfull \hbox (badness 10000) in paragraph at lines 26415--26420 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26424--26426 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26427--26429 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty pe fv Underfull \hbox (badness 10000) in paragraph at lines 26427--26429 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d fv Underfull \hbox (badness 10000) in paragraph at lines 26430--26432 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type cgll Underfull \hbox (badness 10000) in paragraph at lines 26433--26435 []@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26433--26435 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [326] [327] [328] Overfull \hbox (107.25009pt too wide) in paragraph at lines 26605--26605 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 26605--26605 [][] Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te xttt ncremap[] @textrm sup-ports Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l ist of the al-go-rithms Underfull \hbox (badness 10000) in paragraph at lines 26620--26640 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f ault list is Overfull \hbox (0.90259pt too wide) in paragraph at lines 26620--26640 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te xtrm . Overfull \hbox (44.01453pt too wide) in paragraph at lines 26657--26657 [][] [329] [330] [331] [332] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 27078--27078 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 27087--27087 [][] [333] [334] [335] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27326--27326 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 27326--27326 [][] [336] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27399--27399 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 27435--27435 [][] [337] [338] [339] Overfull \hbox (684.99643pt too wide) in paragraph at lines 27726--27785 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers,nBio LayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers,maxEdges,MaxEdges2,nCateg ories,R3,ONE,TWO,FOUR,nEdges,nCells[]@textrm , [340] Overfull \hbox (15.27109pt too wide) in paragraph at lines 27841--27841 [][] [341] Overfull \hbox (15.27109pt too wide) in paragraph at lines 27864--27864 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27864--27864 [][] [342] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27942--27942 [][] Overfull \hbox (67.00928pt too wide) in paragraph at lines 27989--27989 [][] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27989--27989 [][] [343] [344] Overfull \hbox (26.76846pt too wide) in paragraph at lines 28107--28107 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull 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too wide) in paragraph at lines 28949--28949 [][] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29012--29012 [][] Overfull \hbox (32.51715pt too wide) in paragraph at lines 29021--29021 [][] [354] Overfull \hbox (26.76846pt too wide) in paragraph at lines 29034--29034 [][] [355] Underfull \hbox (badness 10000) in paragraph at lines 29155--29155 []@texttt ncremap --vrt_in=vrt.nc -- Underfull \hbox (badness 10000) in paragraph at lines 29156--29156 []@texttt ncremap --vrt_in=vrt.nc -- [356] Overfull \hbox (15.27109pt too wide) in paragraph at lines 29186--29186 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 29187--29187 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] [357] [358] Overfull \hbox (55.18257pt too wide) in paragraph at lines 29377--29377 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox 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10000) in paragraph at lines 30074--30074 []@texttt [-O] [-o @textttsl output- [369] [370] [371] [372] Chapter 5 [373] [374] [375] [376] [377] Chapter 6 [378] [379] Chapter 7 [380] (/builddir/build/BUILD/nco-5.2.4/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [381] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [382] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/cmb_fl_grp.sh [383] Overfull \hbox (32.18782pt too wide) in paragraph at lines 36--36 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 49--49 [][] [384] Overfull \hbox (43.6852pt too wide) in paragraph 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(/builddir/build/BUILD/nco-5.2.4/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.2.4/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [404] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [405] [406] Overfull \hbox (60.93126pt too wide) in paragraph at lines 31437--31437 [][] Chapter 9 [407] [408] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] [409] [410] [411] [412] Overfull \hbox (37.93651pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 31747--31747 [][] [413] Overfull \hbox (693.28691pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31747--31747 [][] [414] Chapter 10 [415] [416] (General Index) [417] [418] (./nco.cps [419] Overfull \hbox (37.49283pt too wide) in paragraph at lines 144--144 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] Overfull \hbox (32.76788pt too wide) in paragraph at lines 153--153 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [420] [421] [422] [423] [424] Overfull \hbox (37.49283pt too wide) in paragraph at lines 756--756 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [425] [426] [427] [428] [429] [430] [431] [432] [433] [434] [435] [436] [437] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2134--2134 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2140--2140 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [438] [439] [440]) [441] [442] ) (see the transcript file for additional information) Output written on nco.pdf (450 pages, 2033232 bytes). Transcript written on nco.log. make: Leaving directory '/builddir/build/BUILD/nco-5.2.4/doc' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.JHiZY3 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64 ++ dirname /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.2.4 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64 'INSTALL=/usr/bin/install -p' Making install in data make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/data' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin' /usr/bin/install -p ncclimo ncremap ncz2psx ncchecker '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin' make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/data' Making install in src make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src' Making install in nco make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p libnco.la '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64' libtool: install: /usr/bin/install -p .libs/libnco-5.2.4.so /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64/libnco-5.2.4.so libtool: install: (cd /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64 && { ln -s -f libnco-5.2.4.so libnco.so || { rm -f libnco.so && ln -s libnco-5.2.4.so libnco.so; }; }) libtool: install: /usr/bin/install -p .libs/libnco.lai /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64/libnco.la libtool: install: /usr/bin/install -p .libs/libnco.a /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64/libnco.a libtool: install: chmod 644 /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64/libnco.a libtool: install: ranlib /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64/libnco.a libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin' libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncatted /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncatted libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncbo /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncbo libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncecat /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncecat libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncflint /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncflint libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncks /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncks libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncpdq /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncpdq libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncra /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncra libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncrename /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncrename libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncwa /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncwa /usr/bin/make install-exec-hook make[4]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco' cd /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff) cd /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea) cd /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces) cd /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat) make[4]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco' Making install in nco++ make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco++' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src/nco++' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncap2 '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin' libtool: warning: '../nco/libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncap2 /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncap2 make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco++' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src/nco++' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src' make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.4/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/src' Making install in man make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.4/man' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/man' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/man/man1' /usr/bin/install -p -m 644 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncpdq.1 ncra.1 ncrcat.1 ncremap.1 ncrename.1 ncwa.1 ncz2psx.1 ncchecker.1 '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/man/man1' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/man' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/man' Making install in doc make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.4/doc' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4/doc' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/info' /usr/bin/install -p -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/info' install-info --info-dir='/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/info' '/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/info/nco.info' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/doc' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.4/doc' make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.4' make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.4' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.4' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.4' + rm /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/lib64/libnco.la + rm -f /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/info/dir + chrpath -d -k /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncap2 /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncatted /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncbo /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncchecker /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncclimo /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncdiff /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncea /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncecat /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/nces /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncflint /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncks /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncpdq /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncra /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncrcat /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncremap /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncrename /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncwa /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncz2psx `/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncchecker' probably isn't an ELF file. elf_open: Exec format error `/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncclimo' probably isn't an ELF file. elf_open: Exec format error `/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncremap' probably isn't an ELF file. elf_open: Exec format error `/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/bin/ncz2psx' probably isn't an ELF file. elf_open: Exec format error + : + /usr/bin/find-debuginfo -j6 --strict-build-id -m -i --build-id-seed 5.2.4-1.fc41 --unique-debug-suffix -5.2.4-1.fc41.x86_64 --unique-debug-src-base nco-5.2.4-1.fc41.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/nco-5.2.4 find-debuginfo: starting Extracting debug info from 11 files DWARF-compressing 11 files sepdebugcrcfix: Updated 11 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/nco-5.2.4-1.fc41.x86_64 cpio: src/nco/ncap_yacc.h: Cannot stat: No such file or directory cpio: src/nco/ncap_yacc.y: Cannot stat: No such file or directory 12665 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/ncclimo from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncremap from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncz2psx from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncchecker from /usr/bin/env bash to #!/usr/bin/bash + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j6 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: nco-5.2.4-1.fc41.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.ClUZxe + umask 022 + cd /builddir/build/BUILD + cd nco-5.2.4 + DOCDIR=/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/README /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/README.md /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/rtfm.txt /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/nco.html /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/nco.pdf /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/nco.css /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/index.shtml /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/TODO /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/ChangeLog /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/nco.png /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/nco_news.shtml /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/nsf.png /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/doc/nco + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.tigmZ1 + umask 022 + cd /builddir/build/BUILD + cd nco-5.2.4 + LICENSEDIR=/builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/licenses/nco + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/licenses/nco + cp -pr /builddir/build/BUILD/nco-5.2.4/doc/LICENSE /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64/usr/share/licenses/nco + RPM_EC=0 ++ jobs -p + exit 0 Provides: libnco-5.2.4.so()(64bit) nco = 5.2.4-1.fc41 nco(x86-64) = 5.2.4-1.fc41 Requires(interp): /sbin/ldconfig /sbin/ldconfig Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /sbin/ldconfig Requires(postun): /sbin/ldconfig Requires: /usr/bin/bash libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcurl.so.4()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libm.so.6(GLIBC_2.38)(64bit) libnco-5.2.4.so()(64bit) libnetcdf.so.19()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libudunits2.so.0()(64bit) rtld(GNU_HASH) Processing files: nco-devel-5.2.4-1.fc41.x86_64 Provides: nco-devel = 5.2.4-1.fc41 nco-devel(x86-64) = 5.2.4-1.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-static-5.2.4-1.fc41.x86_64 Provides: nco-static = 5.2.4-1.fc41 nco-static(x86-64) = 5.2.4-1.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-debugsource-5.2.4-1.fc41.x86_64 Provides: nco-debugsource = 5.2.4-1.fc41 nco-debugsource(x86-64) = 5.2.4-1.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-debuginfo-5.2.4-1.fc41.x86_64 Provides: debuginfo(build-id) = 0d6ea9588563d786cd5f7ca41141d82b4cd943b5 debuginfo(build-id) = 2c52b78bf879f0578e274e694500ab832b917f27 debuginfo(build-id) = 39f935052acdee1ffc5fa09d17ffdda43fc8b0fa debuginfo(build-id) = 4544c2bd76fd305addad371149f4d6a8a5db053c debuginfo(build-id) = 62f4c0fac408d0f65361e61a316a59a9d0fdfe60 debuginfo(build-id) = 857da79e371122ccfe8a9c6bac250fad23c9978b debuginfo(build-id) = 96b83565312235042e09499f4989176861d1a032 debuginfo(build-id) = 9db0cbe5d3b9cff05e96ac9fb40816e908944692 debuginfo(build-id) = a0410d807a78b9d05ffbaa421396144ea8b09a4d debuginfo(build-id) = e14ac645083ce4caecd7ed9608b9167458f40267 debuginfo(build-id) = f26e4b14e7d5e25d4c41d3f3cf1d751e708cb002 libnco-5.2.4.so-5.2.4-1.fc41.x86_64.debug()(64bit) nco-debuginfo = 5.2.4-1.fc41 nco-debuginfo(x86-64) = 5.2.4-1.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(x86-64) = 5.2.4-1.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/nco-5.2.4-1.fc41.x86_64 Wrote: /builddir/build/RPMS/nco-devel-5.2.4-1.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/nco-static-5.2.4-1.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/nco-debugsource-5.2.4-1.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/nco-5.2.4-1.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/nco-debuginfo-5.2.4-1.fc41.x86_64.rpm Child return code was: 0