Mock Version: 6.0
Mock Version: 6.0
Mock Version: 6.0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/libsonata.spec'], chrootPath='/var/lib/mock/f42-build-56769447-6546037/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fb08fc71370>timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jvtw6kaw:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'])
Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jvtw6kaw:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '77bf9f5673c047809e395c0a5e8c14ff', '-D', '/var/lib/mock/f42-build-56769447-6546037/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jvtw6kaw:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/libsonata.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1737331200
Wrote: /builddir/build/SRPMS/libsonata-0.1.23-13.fc42.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/libsonata.spec'], chrootPath='/var/lib/mock/f42-build-56769447-6546037/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fb08fc71370>timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jvtw6kaw:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'])
Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jvtw6kaw:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'fe6a16bb4ca64ef59588302f9f18e9f3', '-D', '/var/lib/mock/f42-build-56769447-6546037/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.jvtw6kaw:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/libsonata.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1737331200
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.ffbQwz
+ umask 022
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ test -d /builddir/build/BUILD/libsonata-0.1.23-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libsonata-0.1.23-build
+ /usr/bin/rm -rf /builddir/build/BUILD/libsonata-0.1.23-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.23-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.23-build/SPECPARTS
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.HOAp31
+ umask 022
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ rm -rf libsonata-0.1.23
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/libsonata-0.1.23.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd libsonata-0.1.23
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/bin/git init -q
+ /usr/bin/git config user.name rpm-build
+ /usr/bin/git config user.email '<rpm-build>'
+ /usr/bin/git config gc.auto 0
+ /usr/bin/git add --force .
+ GIT_COMMITTER_DATE=@1737331200
+ GIT_AUTHOR_DATE=@1737331200
+ /usr/bin/git commit -q --allow-empty -a --author 'rpm-build <rpm-build>' -m 'libsonata-0.1.23 base'
+ /usr/bin/git checkout --track -b rpm-build
Switched to a new branch 'rpm-build'
branch 'rpm-build' set up to track 'master'.
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-include-catch-cmake.patch
+ /usr/bin/git apply --index --reject -
Checking patch tests/CMakeLists.txt...
Applied patch tests/CMakeLists.txt cleanly.
+ GIT_COMMITTER_DATE=@1737331200
+ GIT_AUTHOR_DATE=@1737331200
+ /usr/bin/git commit -q -m 0001-include-catch-cmake.patch --author 'rpm-build <rpm-build>'
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0002-use-cpp-17-filesystem.patch
+ /usr/bin/git apply --index --reject -
Checking patch src/config.cpp...
Applied patch src/config.cpp cleanly.
+ GIT_COMMITTER_DATE=@1737331200
+ GIT_AUTHOR_DATE=@1737331200
+ /usr/bin/git commit -q -m 0002-use-cpp-17-filesystem.patch --author 'rpm-build <rpm-build>'
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0003-Remove-pybind-redeclarations.patch
+ /usr/bin/git apply --index --reject -
Checking patch python/bindings.cpp...
Applied patch python/bindings.cpp cleanly.
+ GIT_COMMITTER_DATE=@1737331200
+ GIT_AUTHOR_DATE=@1737331200
+ /usr/bin/git commit -q -m 0003-Remove-pybind-redeclarations.patch --author 'rpm-build <rpm-build>'
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0004-disable-python-ext-build.patch
+ /usr/bin/git apply --index --reject -
Checking patch setup.py...
Applied patch setup.py cleanly.
+ GIT_COMMITTER_DATE=@1737331200
+ GIT_AUTHOR_DATE=@1737331200
+ /usr/bin/git commit -q -m 0004-disable-python-ext-build.patch --author 'rpm-build <rpm-build>'
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0005-set-libdir.patch
+ /usr/bin/git apply --index --reject -
Checking patch CMakeLists.txt...
Applied patch CMakeLists.txt cleanly.
+ GIT_COMMITTER_DATE=@1737331200
+ GIT_AUTHOR_DATE=@1737331200
+ /usr/bin/git commit -q -m 0005-set-libdir.patch --author 'rpm-build <rpm-build>'
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0006-adapt-to-fmt-11.patch
+ /usr/bin/git apply --index --reject -
Checking patch src/node_sets.cpp...
Applied patch src/node_sets.cpp cleanly.
+ GIT_COMMITTER_DATE=@1737331200
+ GIT_AUTHOR_DATE=@1737331200
+ /usr/bin/git commit -q -m 0006-adapt-to-fmt-11.patch --author 'rpm-build <rpm-build>'
+ rm -rf libsonata.egg-info
+ rm -rf extlib/Catch2 extlib/Highfive extlib/fmt extlib/nlohmann
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.lU6iJ7
+ umask 022
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd libsonata-0.1.23
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/bin -DCMAKE_INSTALL_SBINDIR:PATH=bin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DSONATA_PYTHON=ON -DEXTLIB_FROM_SUBMODULES=OFF -DSONATA_VERSION=0.1.23 -DSONATA_TESTS=ON -DSONATA_CXX_WARNINGS=OFF -DCMAKE_CXX_STANDARD=17
CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
  Compatibility with CMake < 3.10 will be removed from a future version of
  CMake.
  Update the VERSION argument <min> value.  Or, use the <min>...<max> syntax
  to tell CMake that the project requires at least <min> but has been updated
  to work with policies introduced by <max> or earlier.
CMake Deprecation Warning at CMakeLists.txt:2 (cmake_policy):
  Compatibility with CMake < 3.10 will be removed from a future version of
  CMake.
  Update the VERSION argument <min> value.  Or, use the <min>...<max> syntax
  to tell CMake that the project requires at least <min> but has been updated
  to work with policies introduced by <max> or earlier.
-- The C compiler identification is GNU 15.0.1
-- The CXX compiler identification is GNU 15.0.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- HIGHFIVE 2.10.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO)
-- Found HDF5: /usr/lib64/libhdf5.so (found version "1.14.5")
CMake Warning (dev) at /usr/lib64/cmake/HighFive/HighFiveTargetDeps.cmake:55 (find_package):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.
Call Stack (most recent call first):
  /usr/lib64/cmake/HighFive/HighFiveConfig.cmake:93 (include)
  CMakeLists.txt:79 (find_package)
This warning is for project developers.  Use -Wno-dev to suppress it.
-- Found Boost: /usr/include (found version "1.83.0") found components: system serialization
-- Found nlohmann_json: /usr/share/cmake/nlohmann_json/nlohmann_jsonConfig.cmake (found version "3.11.3")
CMake Warning (dev) at /usr/share/cmake/pybind11/FindPythonLibsNew.cmake:101 (message):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning, or
  preferably upgrade to using FindPython, either by calling it explicitly
  before pybind11, or by setting PYBIND11_FINDPYTHON ON before pybind11.
Call Stack (most recent call first):
  /usr/share/cmake/pybind11/pybind11Tools.cmake:50 (find_package)
  /usr/share/cmake/pybind11/pybind11Common.cmake:228 (include)
  /usr/share/cmake/pybind11/pybind11Config.cmake:250 (include)
  python/CMakeLists.txt:6 (find_package)
This warning is for project developers.  Use -Wno-dev to suppress it.
-- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13.1", minimum required is "3.7")
-- Found PythonLibs: /usr/lib64/libpython3.13.so
-- Performing Test HAS_FLTO
-- Performing Test HAS_FLTO - Success
-- Found pybind11: /usr/include (found version "2.13.6")
-- Warning: this does not have an effect - use NO_SYSTEM_FROM_IMPORTED if using imported targets
-- Configuring done (1.3s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    CMAKE_INSTALL_FULL_SBINDIR
    CMAKE_INSTALL_SBINDIR
    INCLUDE_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build
+ /usr/bin/cmake --build redhat-linux-build -j6 --verbose
Change Dir: '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build'
Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j6
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cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_config.cpp.o -MF CMakeFiles/unittests.dir/test_config.cpp.o.d -o CMakeFiles/unittests.dir/test_config.cpp.o -c /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_config.cpp
cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_edges.cpp.o -MF CMakeFiles/unittests.dir/test_edges.cpp.o.d -o CMakeFiles/unittests.dir/test_edges.cpp.o -c /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_edges.cpp
cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_nodes.cpp.o -MF CMakeFiles/unittests.dir/test_nodes.cpp.o.d -o CMakeFiles/unittests.dir/test_nodes.cpp.o -c /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_nodes.cpp
In file included from /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_config.cpp:1:
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_config.cpp: In function ‘void C_A_T_C_H_T_E_S_T_0()’:
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_config.cpp:51:44: warning: ignoring return value of ‘static nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass> nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::parse(InputType&&, parser_callback_t, bool, bool) [with InputType = const std::__cxx11::basic_string<char>&; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector<unsigned char>; CustomBaseClass = void; parser_callback_t = std::function<bool(int, nlohmann::json_abi_v3_11_3::detail::parse_event_t, nlohmann::json_abi_v3_11_3::basic_json<>&)>]’, declared with attribute ‘warn_unused_result’ [-Wunused-result]
   51 |         CHECK_NOTHROW(nlohmann::json::parse(config.getExpandedJSON()));
      |                       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_config.cpp:3:
/usr/include/nlohmann/json.hpp:4015:23: note: declared here
 4015 |     static basic_json parse(InputType&& i,
      |                       ^~~~~
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_config.cpp: In function ‘void C_A_T_C_H_T_E_S_T_5()’:
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_config.cpp:391:44: warning: ignoring return value of ‘static nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass> nlohmann::json_abi_v3_11_3::basic_json<ObjectType, ArrayType, StringType, BooleanType, NumberIntegerType, NumberUnsignedType, NumberFloatType, AllocatorType, JSONSerializer, BinaryType, CustomBaseClass>::parse(InputType&&, parser_callback_t, bool, bool) [with InputType = const std::__cxx11::basic_string<char>&; ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string<char>; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::json_abi_v3_11_3::adl_serializer; BinaryType = std::vector<unsigned char>; CustomBaseClass = void; parser_callback_t = std::function<bool(int, nlohmann::json_abi_v3_11_3::detail::parse_event_t, nlohmann::json_abi_v3_11_3::basic_json<>&)>]’, declared with attribute ‘warn_unused_result’ [-Wunused-result]
  391 |         CHECK_NOTHROW(nlohmann::json::parse(config.getExpandedJSON()));
      |                       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/nlohmann/json.hpp:4015:23: note: declared here
 4015 |     static basic_json parse(InputType&& i,
      |                       ^~~~~
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/python/bindings.cpp: In lambda function:
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/python/bindings.cpp:424:39: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘pybind11::ssize_t’ {aka ‘long int’} [-Wsign-compare]
  424 |                  for (size_t i = 0; i < raw.shape(0); ++i) {
      |                                     ~~^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include/bbp/sonata/edges.h:13,
                 from /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include/bbp/sonata/config.h:20,
                 from /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/python/bindings.cpp:6:
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include/bbp/sonata/population.h: In instantiation of ‘static bbp::sonata::Selection bbp::sonata::Selection::fromValues(Iterator, Iterator) [with Iterator = const long int*]’:
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/python/bindings.cpp:430:46:   required from here
  430 |                  return Selection::fromValues(raw.data(0), raw.data(raw.shape(0)));
      |                         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include/bbp/sonata/population.h:77:15: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘long unsigned int’ [-Wsign-compare]
   77 |         if (v == range.second) {
      |             ~~^~~~~~~~~~~~~~~
[ 91%] Building CXX object tests/CMakeFiles/unittests.dir/test_report_reader.cpp.o
cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_report_reader.cpp.o -MF CMakeFiles/unittests.dir/test_report_reader.cpp.o.d -o CMakeFiles/unittests.dir/test_report_reader.cpp.o -c /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_report_reader.cpp
[ 94%] Building CXX object tests/CMakeFiles/unittests.dir/test_selection.cpp.o
cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests && /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMPI_NO_CPPBIND -DSONATA_DLL -I/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -MD -MT tests/CMakeFiles/unittests.dir/test_selection.cpp.o -MF CMakeFiles/unittests.dir/test_selection.cpp.o.d -o CMakeFiles/unittests.dir/test_selection.cpp.o -c /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_selection.cpp
In file included from /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_report_reader.cpp:1:
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_report_reader.cpp: In function ‘void testTimes(const std::vector<double>&, double, double, int)’:
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_report_reader.cpp:8:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    8 |     REQUIRE(size == vec.size());
      |             ~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/test_report_reader.cpp:9:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
    9 |     for (int i = 0; i < vec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~
[ 97%] Linking CXX shared module _libsonata.cpython-313-x86_64-linux-gnu.so
cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/sonata_python.dir/link.txt --verbose=1
[100%] Linking CXX executable unittests
cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unittests.dir/link.txt --verbose=1
/usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -flto -Wl,--dependency-file=CMakeFiles/sonata_python.dir/link.d -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared  -o _libsonata.cpython-313-x86_64-linux-gnu.so CMakeFiles/sonata_python.dir/bindings.cpp.o  ../libsonata.a /usr/lib64/libhdf5.so
cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/python && /usr/bin/strip /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/python/_libsonata.cpython-313-x86_64-linux-gnu.so
gmake[2]: Leaving directory '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build'
[100%] Built target sonata_python
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic -Wl,--dependency-file=CMakeFiles/unittests.dir/link.d CMakeFiles/unittests.dir/main.cpp.o CMakeFiles/unittests.dir/test_config.cpp.o CMakeFiles/unittests.dir/test_edges.cpp.o CMakeFiles/unittests.dir/test_node_sets.cpp.o CMakeFiles/unittests.dir/test_nodes.cpp.o CMakeFiles/unittests.dir/test_report_reader.cpp.o CMakeFiles/unittests.dir/test_selection.cpp.o -o unittests  -Wl,-rpath,/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build ../libsonata.so.0.1.23 /usr/lib64/libhdf5.so
cd /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests && /usr/bin/cmake -D TEST_TARGET=unittests -D TEST_EXECUTABLE=/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests/unittests -D TEST_EXECUTOR= -D TEST_WORKING_DIR=/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests -D TEST_SPEC= -D TEST_EXTRA_ARGS= -D TEST_PROPERTIES= -D TEST_PREFIX= -D TEST_SUFFIX= -D TEST_LIST=unittests_TESTS -D TEST_REPORTER= -D TEST_OUTPUT_DIR= -D TEST_OUTPUT_PREFIX= -D TEST_OUTPUT_SUFFIX= -D CTEST_FILE=/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/tests/unittests_tests-b12d07c.cmake -P /usr/lib64/cmake/Catch2/CatchAddTests.cmake
gmake[2]: Leaving directory '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build'
[100%] Built target unittests
gmake[1]: Leaving directory '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build/CMakeFiles 0
+ export SETUPTOOLS_SCM_PRETEND_VERSION=0.1.23
+ SETUPTOOLS_SCM_PRETEND_VERSION=0.1.23
+ cp -a README.rst redhat-linux-build
+ cp -a setup.py redhat-linux-build
+ cp -a pyproject.toml redhat-linux-build
+ cp -a COPYING.LESSER redhat-linux-build
+ cp -a MANIFEST.in redhat-linux-build
+ mkdir -p redhat-linux-build/python/libsonata/
+ cp -a python/libsonata/__init__.py redhat-linux-build/python/libsonata
+ pushd redhat-linux-build
~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build ~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
+ mkdir -p /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
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+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/pyproject-wheeldir
Processing /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build
  Preparing metadata (pyproject.toml): started
  Running command Preparing metadata (pyproject.toml)
  WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
  Traceback (most recent call last):
    File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject
      section = defn.get("tool", {})[tool_name]
                ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
  KeyError: 'setuptools_scm'
  running dist_info
  creating /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata.egg-info
  writing /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata.egg-info/PKG-INFO
  writing dependency_links to /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata.egg-info/dependency_links.txt
  writing requirements to /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata.egg-info/requires.txt
  writing top-level names to /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata.egg-info/top_level.txt
  writing manifest file '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata.egg-info/SOURCES.txt'
  reading manifest file '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching '*' under directory 'include'
  warning: no files found matching 'CMakeLists.txt'
  warning: no files found matching 'extlib/CMakeLists.txt'
  warning: no files found matching 'extlib/nlohmann/json.hpp'
  warning: no files found matching '*' under directory 'extlib/fmt/include'
  warning: no files found matching '*' under directory 'extlib/fmt/src'
  warning: no files found matching '*.cmake' under directory 'extlib/fmt/support/cmake'
  warning: no files found matching 'extlib/fmt/CMakeLists.txt'
  warning: no files found matching 'extlib/fmt/*.rst'
  warning: no files found matching '*' under directory 'extlib/HighFive/include'
  warning: no files found matching 'extlib/HighFive/CMakeLists.txt'
  warning: no files found matching 'extlib/HighFive/LICENSE'
  warning: no files found matching 'extlib/filesystem.hpp'
  warning: no files found matching '*' under directory 'python/pybind11/include'
  warning: no files found matching '*.cmake' under directory 'python/pybind11/tools'
  warning: no files found matching 'python/pybind11/CMakeLists.txt'
  warning: no files found matching 'python/pybind11/LICENSE'
  adding license file 'COPYING.LESSER'
  writing manifest file '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata.egg-info/SOURCES.txt'
  creating '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-modern-metadata-_l2ttwuf/libsonata-0.1.23.dist-info'
  Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: libsonata
  Building wheel for libsonata (pyproject.toml): started
  Running command Building wheel for libsonata (pyproject.toml)
  WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
  Traceback (most recent call last):
    File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject
      section = defn.get("tool", {})[tool_name]
                ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
  KeyError: 'setuptools_scm'
  running bdist_wheel
  running build
  running build_py
  creating build
  creating build/lib.linux-x86_64-cpython-313
  creating build/lib.linux-x86_64-cpython-313/libsonata
  copying python/libsonata/__init__.py -> build/lib.linux-x86_64-cpython-313/libsonata
  running build_ext
  installing to build/bdist.linux-x86_64/wheel
  running install
  running install_lib
  creating build/bdist.linux-x86_64
  creating build/bdist.linux-x86_64/wheel
  creating build/bdist.linux-x86_64/wheel/libsonata
  copying build/lib.linux-x86_64-cpython-313/libsonata/__init__.py -> build/bdist.linux-x86_64/wheel/./libsonata
  running install_egg_info
  running egg_info
  creating python/libsonata.egg-info
  writing python/libsonata.egg-info/PKG-INFO
  writing dependency_links to python/libsonata.egg-info/dependency_links.txt
  writing requirements to python/libsonata.egg-info/requires.txt
  writing top-level names to python/libsonata.egg-info/top_level.txt
  writing manifest file 'python/libsonata.egg-info/SOURCES.txt'
  reading manifest file 'python/libsonata.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no files found matching '*' under directory 'include'
  warning: no files found matching 'CMakeLists.txt'
  warning: no files found matching 'extlib/CMakeLists.txt'
  warning: no files found matching 'extlib/nlohmann/json.hpp'
  warning: no files found matching '*' under directory 'extlib/fmt/include'
  warning: no files found matching '*' under directory 'extlib/fmt/src'
  warning: no files found matching '*.cmake' under directory 'extlib/fmt/support/cmake'
  warning: no files found matching 'extlib/fmt/CMakeLists.txt'
  warning: no files found matching 'extlib/fmt/*.rst'
  warning: no files found matching '*' under directory 'extlib/HighFive/include'
  warning: no files found matching 'extlib/HighFive/CMakeLists.txt'
  warning: no files found matching 'extlib/HighFive/LICENSE'
  warning: no files found matching 'extlib/filesystem.hpp'
  warning: no files found matching '*' under directory 'python/pybind11/include'
  warning: no files found matching '*.cmake' under directory 'python/pybind11/tools'
  warning: no files found matching 'python/pybind11/CMakeLists.txt'
  warning: no files found matching 'python/pybind11/LICENSE'
  adding license file 'COPYING.LESSER'
  writing manifest file 'python/libsonata.egg-info/SOURCES.txt'
  Copying python/libsonata.egg-info to build/bdist.linux-x86_64/wheel/./libsonata-0.1.23-py3.13.egg-info
  running install_scripts
  creating build/bdist.linux-x86_64/wheel/libsonata-0.1.23.dist-info/WHEEL
  creating '/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir/pip-wheel-gbfkb44t/.tmp-cy4jcejl/libsonata-0.1.23-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
  adding 'libsonata/__init__.py'
  adding 'libsonata-0.1.23.dist-info/COPYING.LESSER'
  adding 'libsonata-0.1.23.dist-info/METADATA'
  adding 'libsonata-0.1.23.dist-info/WHEEL'
  adding 'libsonata-0.1.23.dist-info/top_level.txt'
  adding 'libsonata-0.1.23.dist-info/RECORD'
  removing build/bdist.linux-x86_64/wheel
  Building wheel for libsonata (pyproject.toml): finished with status 'done'
  Created wheel for libsonata: filename=libsonata-0.1.23-cp313-cp313-linux_x86_64.whl size=8519 sha256=a7c4df4bdc35c80be2592c771a12d32ea995583725881e206ebfa541fa6437cf
  Stored in directory: /builddir/.cache/pip/wheels/4c/00/f7/4a34f1c54e616a8baccb759d4c3d12096f209c7b5f68a68b5e
Successfully built libsonata
+ popd
~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/tests/data ~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
+ pushd tests/data
+ /usr/bin/python3 generate.py
+ popd
~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
+ mkdir -p redhat-linux-build/tests
+ cp -a tests/data redhat-linux-build/tests
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.07Suzs
+ umask 022
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ '[' /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT
++ dirname /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/libsonata-0.1.23-build
+ mkdir /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd libsonata-0.1.23
+ DESTDIR=/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT
+ /usr/bin/cmake --install redhat-linux-build
-- Install configuration: ""
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/libsonata.so.0.1.23
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/libsonata.so.0.1
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/libsonata.so
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/libsonata.a
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/common.h
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/config.h
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/edges.h
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/node_sets.h
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/nodes.h
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/optional.hpp
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/population.h
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/report_reader.h
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/include/bbp/sonata/variant.hpp
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/sonata/CMake/sonata-config.cmake
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/sonata/CMake/sonata-targets.cmake
-- Installing: /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/sonata/CMake/sonata-targets-noconfig.cmake
+ rm -rf /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT//usr/lib64/libsonata.a
+ install -p -m 0655 -D -t /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT//usr/lib64/python3.13/site-packages/libsonata/ redhat-linux-build/python/_libsonata.cpython-313-x86_64-linux-gnu.so
+ export SETUPTOOLS_SCM_PRETEND_VERSION=0.1.23
+ SETUPTOOLS_SCM_PRETEND_VERSION=0.1.23
~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build ~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
+ pushd redhat-linux-build
++ ls /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/pyproject-wheeldir/libsonata-0.1.23-cp313-cp313-linux_x86_64.whl
++ xargs basename --multiple
++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/'
+ specifier=libsonata==0.1.23
+ '[' -z libsonata==0.1.23 ']'
+ TMPDIR=/builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/.pyproject-builddir
+ /usr/bin/python3 -m pip install --root /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/pyproject-wheeldir libsonata==0.1.23
Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13)
Looking in links: /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/pyproject-wheeldir
Processing /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/pyproject-wheeldir/libsonata-0.1.23-cp313-cp313-linux_x86_64.whl
Installing collected packages: libsonata
Successfully installed libsonata-0.1.23
+ '[' -d /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/bin ']'
+ rm -f /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23-13.fc42.x86_64-pyproject-ghost-distinfo
+ site_dirs=()
+ '[' -d /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib/python3.13/site-packages ']'
+ '[' /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib/python3.13/site-packages ']'
+ '[' -d /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages ']'
+ site_dirs+=("/usr/lib64/python3.13/site-packages")
+ for site_dir in ${site_dirs[@]}
+ for distinfo in /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT$site_dir/*.dist-info
+ echo '%ghost /usr/lib64/python3.13/site-packages/libsonata-0.1.23.dist-info'
+ sed -i s/pip/rpm/ /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.23.dist-info/INSTALLER
+ PYTHONPATH=/usr/lib/rpm/redhat
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT --record /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.23.dist-info/RECORD --output /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23-13.fc42.x86_64-pyproject-record
+ rm -fv /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.23.dist-info/RECORD
removed '/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.23.dist-info/RECORD'
+ rm -fv /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.23.dist-info/REQUESTED
removed '/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata-0.1.23.dist-info/REQUESTED'
++ wc -l /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23-13.fc42.x86_64-pyproject-ghost-distinfo
++ cut -f1 '-d '
+ lines=1
+ '[' 1 -ne 1 ']'
+ RPM_FILES_ESCAPE=4.19
+ /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23-13.fc42.x86_64-pyproject-files --output-modules /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23-13.fc42.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23-13.fc42.x86_64-pyproject-record --prefix /usr -l libsonata
+ popd
~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
+ /usr/bin/find-debuginfo -j6 --strict-build-id -m -i --build-id-seed 0.1.23-13.fc42 --unique-debug-suffix -0.1.23-13.fc42.x86_64 --unique-debug-src-base libsonata-0.1.23-13.fc42.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
find-debuginfo: starting
Extracting debug info from 1 files
DWARF-compressing 1 files
sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/libsonata-0.1.23-13.fc42.x86_64
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j6
Bytecompiling .py files below /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13 using python3.13
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j6 /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT
/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsonata/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
Scanned 28 directories and 50 files,
               processed 1 inodes,
               1 modified (0 replaced + 1 rewritten),
               0 unsupported format, 0 errors
Reading /builddir/build/BUILD/libsonata-0.1.23-build/SPECPARTS/rpm-debuginfo.specpart
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.4ASkDz
+ umask 022
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd libsonata-0.1.23
+ /usr/bin/ctest --test-dir redhat-linux-build --output-on-failure --force-new-ctest-process -j6 tests
Internal ctest changing into directory: /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build
Test project /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/redhat-linux-build
      Start  1: Selection
      Start  2: SpikeReader
      Start  3: SomaReportReader limits
      Start  4: SomaReportReader
      Start  5: ElementReportReader limits
      Start  6: ElementReportReader
 1/30 Test  #1: Selection .......................................   Passed    0.01 sec
      Start  7: NodePopulation
 2/30 Test  #3: SomaReportReader limits .........................   Passed    0.01 sec
      Start  8: NodePopulationMove
 3/30 Test  #2: SpikeReader .....................................   Passed    0.01 sec
 4/30 Test  #4: SomaReportReader ................................   Passed    0.01 sec
 5/30 Test  #5: ElementReportReader limits ......................   Passed    0.01 sec
      Start  9: NodePopulationSelectAll
      Start 10: NodePopulationmatchAttributeValues
      Start 11: NodePopulationmatchAttributeValues - int8_t
 6/30 Test  #6: ElementReportReader .............................   Passed    0.01 sec
      Start 12: NodePopulationmatchAttributeValues - uint8_t
 7/30 Test  #8: NodePopulationMove ..............................   Passed    0.01 sec
      Start 13: NodePopulationmatchAttributeValues - int16_t
 8/30 Test  #9: NodePopulationSelectAll .........................   Passed    0.01 sec
      Start 14: NodePopulationmatchAttributeValues - uint16_t
 9/30 Test  #7: NodePopulation ..................................   Passed    0.01 sec
      Start 15: NodePopulationmatchAttributeValues - int32_t
10/30 Test #11: NodePopulationmatchAttributeValues - int8_t .....   Passed    0.01 sec
      Start 16: NodePopulationmatchAttributeValues - uint32_t
11/30 Test #10: NodePopulationmatchAttributeValues ..............   Passed    0.01 sec
      Start 17: NodePopulationmatchAttributeValues - int64_t
12/30 Test #12: NodePopulationmatchAttributeValues - uint8_t ....   Passed    0.01 sec
13/30 Test #13: NodePopulationmatchAttributeValues - int16_t ....   Passed    0.01 sec
      Start 18: NodePopulationmatchAttributeValues - uint64_t
      Start 19: NodeSetParse
14/30 Test #14: NodePopulationmatchAttributeValues - uint16_t ...   Passed    0.01 sec
      Start 20: NodeSetBasic
15/30 Test #16: NodePopulationmatchAttributeValues - uint32_t ...   Passed    0.01 sec
      Start 21: NodeSetCompound
16/30 Test #15: NodePopulationmatchAttributeValues - int32_t ....   Passed    0.01 sec
      Start 22: NodeSet
17/30 Test #17: NodePopulationmatchAttributeValues - int64_t ....   Passed    0.01 sec
18/30 Test #18: NodePopulationmatchAttributeValues - uint64_t ...   Passed    0.01 sec
      Start 23: EdgePopulation
      Start 24: EdgePopulationSelectAll
19/30 Test #19: NodeSetParse ....................................   Passed    0.01 sec
      Start 25: EdgePopulation::writeIndices
20/30 Test #20: NodeSetBasic ....................................   Passed    0.01 sec
21/30 Test #21: NodeSetCompound .................................   Passed    0.01 sec
22/30 Test #22: NodeSet .........................................   Passed    0.01 sec
      Start 26: EdgeStorage
      Start 27: CircuitConfig
      Start 28: SimulationConfig
23/30 Test #24: EdgePopulationSelectAll .........................   Passed    0.01 sec
      Start 29: SONATA
24/30 Test #23: EdgePopulation ..................................   Passed    0.01 sec
25/30 Test #25: EdgePopulation::writeIndices ....................   Passed    0.01 sec
      Start 30: unittests
26/30 Test #26: EdgeStorage .....................................   Passed    0.01 sec
27/30 Test #27: CircuitConfig ...................................   Passed    0.01 sec
28/30 Test #28: SimulationConfig ................................   Passed    0.01 sec
29/30 Test #29: SONATA ..........................................   Passed    0.01 sec
30/30 Test #30: unittests .......................................   Passed    0.03 sec
100% tests passed, 0 tests failed out of 30
Total Test time (real) =   0.08 sec
+ pushd python/tests
~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/python/tests ~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
+ export PYTHONPATH=/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT//usr/lib64/python3.13/site-packages/
+ PYTHONPATH=/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT//usr/lib64/python3.13/site-packages/
+ /usr/bin/python3 -m unittest -v
test_astrocyte_properties (test_config.TestCircuitConfig.test_astrocyte_properties) ... ok
test_basic (test_config.TestCircuitConfig.test_basic) ... ok
test_biophysical_properties_raises (test_config.TestCircuitConfig.test_biophysical_properties_raises) ... ok
test_duplicate_population (test_config.TestCircuitConfig.test_duplicate_population) ... ok
test_endfeet_properties (test_config.TestCircuitConfig.test_endfeet_properties) ... ok
test_expanded_json (test_config.TestCircuitConfig.test_expanded_json) ... ok
test_get_population_properties (test_config.TestCircuitConfig.test_get_population_properties) ... ok
test_partial (test_config.TestCircuitConfig.test_partial) ... ok
test_shadowing_morphs (test_config.TestCircuitConfig.test_shadowing_morphs) ... ok
test_spatial_directories (test_config.TestCircuitConfig.test_spatial_directories) ... ok
test_vasculature_properties (test_config.TestCircuitConfig.test_vasculature_properties) ... ok
test_basic (test_config.TestSimulationConfig.test_basic) ... ok
test_empty_connection_overrides (test_config.TestSimulationConfig.test_empty_connection_overrides) ... ok
test_expanded_json (test_config.TestSimulationConfig.test_expanded_json) ... ok
test_run (test_config.TestSimulationConfig.test_run) ... ok
test_simulation_config_failures (test_config.TestSimulationConfig.test_simulation_config_failures) ... ok
test_BasicScalarAnded (test_nodesets.TestNodePopulationNodeSet.test_BasicScalarAnded) ... ok
test_BasicScalarEnum (test_nodesets.TestNodePopulationNodeSet.test_BasicScalarEnum) ... ok
test_BasicScalarInt (test_nodesets.TestNodePopulationNodeSet.test_BasicScalarInt) ... ok
test_BasicScalarNodeId (test_nodesets.TestNodePopulationNodeSet.test_BasicScalarNodeId) ... ok
test_BasicScalarPopulation (test_nodesets.TestNodePopulationNodeSet.test_BasicScalarPopulation) ... ok
test_BasicScalarString (test_nodesets.TestNodePopulationNodeSet.test_BasicScalarString) ... ok
test_NodeSetCompound (test_nodesets.TestNodePopulationNodeSet.test_NodeSetCompound) ... ok
test_NodeSetEmptyArray (test_nodesets.TestNodePopulationNodeSet.test_NodeSetEmptyArray) ... ok
test_NodeSet_toJSON (test_nodesets.TestNodePopulationNodeSet.test_NodeSet_toJSON) ... ok
test_library_datatype (test_nodesets.TestNodePopulationNodeSet.test_library_datatype) ... ok
test_BasicScalarFailFloat (test_nodesets.TestNodeSetFailure.test_BasicScalarFailFloat) ... ok
test_BasicScalarFailNegativeNodeIds (test_nodesets.TestNodeSetFailure.test_BasicScalarFailNegativeNodeIds) ... ok
test_BasicScalarFailPopulation (test_nodesets.TestNodeSetFailure.test_BasicScalarFailPopulation) ... ok
test_CorrectStructure (test_nodesets.TestNodeSetFailure.test_CorrectStructure) ... ok
test_FailCompoundWithInt (test_nodesets.TestNodeSetFailure.test_FailCompoundWithInt) ... ok
test_FaileRecursiveCompound (test_nodesets.TestNodeSetFailure.test_FaileRecursiveCompound) ... ok
test_MissingBasic (test_nodesets.TestNodeSetFailure.test_MissingBasic) ... ok
test_MissingFile (test_nodesets.TestNodeSetFailure.test_MissingFile) ... ok
test_afferent_edges (test_population.TestEdgePopulation.test_afferent_edges) ... ok
test_connecting_edges (test_population.TestEdgePopulation.test_connecting_edges) ... ok
test_efferent_edges (test_population.TestEdgePopulation.test_efferent_edges) ... ok
test_library_enumeration (test_population.TestEdgePopulation.test_library_enumeration) ... ok
test_select_all (test_population.TestEdgePopulation.test_select_all) ... ok
test_source (test_population.TestEdgePopulation.test_source) ... ok
test_source_nodes (test_population.TestEdgePopulation.test_source_nodes) ... ok
test_target (test_population.TestEdgePopulation.test_target) ... ok
test_target_nodes (test_population.TestEdgePopulation.test_target_nodes) ... ok
test_path_ctor (test_population.TestMisc.test_path_ctor) ... ok
test_attribute_names (test_population.TestNodePopulation.test_attribute_names) ... ok
test_enumeration_names (test_population.TestNodePopulation.test_enumeration_names) ... ok
test_enumeration_values (test_population.TestNodePopulation.test_enumeration_values) ... ok
test_get_attribute (test_population.TestNodePopulation.test_get_attribute) ... ok
test_get_dynamics_attribute (test_population.TestNodePopulation.test_get_dynamics_attribute) ... ok
test_match_values (test_population.TestNodePopulation.test_match_values) ... ok
test_name (test_population.TestNodePopulation.test_name) ... ok
test_select_all (test_population.TestNodePopulation.test_select_all) ... ok
test_size (test_population.TestNodePopulation.test_size) ... ok
test_basic (test_population.TestSelection.test_basic) ... ok
test_comparison (test_population.TestSelection.test_comparison) ... ok
test_dtypes (test_population.TestSelection.test_dtypes) ... ok
test_from_ranges (test_population.TestSelection.test_from_ranges) ... ok
test_from_values (test_population.TestSelection.test_from_values) ... ok
test_from_values_empty (test_population.TestSelection.test_from_values_empty) ... ok
test_union_intersection (test_population.TestSelection.test_union_intersection) ... ok
test_block_gap_limit (test_reports.TestElementReportReader.test_block_gap_limit) ... ok
test_get_all_population (test_reports.TestElementReportReader.test_get_all_population) ... ok
test_get_inexistant_population (test_reports.TestElementReportReader.test_get_inexistant_population) ... HDF5-DIAG: Error detected in HDF5 (1.14.5):
  #000: ../../src/H5G.c line 437 in H5Gopen2(): unable to synchronously open group
    major: Symbol table
    minor: Unable to create file
  #001: ../../src/H5G.c line 399 in H5G__open_api_common(): unable to open group
    major: Symbol table
    minor: Can't open object
  #002: ../../src/H5VLcallback.c line 4354 in H5VL_group_open(): group open failed
    major: Virtual Object Layer
    minor: Can't open object
  #003: ../../src/H5VLcallback.c line 4321 in H5VL__group_open(): group open failed
    major: Virtual Object Layer
    minor: Can't open object
  #004: ../../src/H5VLnative_group.c line 153 in H5VL__native_group_open(): unable to open group
    major: Symbol table
    minor: Can't open object
  #005: ../../src/H5Gint.c line 380 in H5G__open_name(): group not found
    major: Symbol table
    minor: Object not found
  #006: ../../src/H5Gloc.c line 424 in H5G_loc_find(): can't find object
    major: Symbol table
    minor: Object not found
  #007: ../../src/H5Gtraverse.c line 824 in H5G_traverse(): internal path traversal failed
    major: Symbol table
    minor: Object not found
  #008: ../../src/H5Gtraverse.c line 596 in H5G__traverse_real(): traversal operator failed
    major: Symbol table
    minor: Callback failed
  #009: ../../src/H5Gloc.c line 381 in H5G__loc_find_cb(): object 'foobar' doesn't exist
    major: Symbol table
    minor: Object not found
ok
test_get_node_id_element_id_mapping (test_reports.TestElementReportReader.test_get_node_id_element_id_mapping) ... ok
test_get_node_ids (test_reports.TestElementReportReader.test_get_node_ids) ... ok
test_get_population (test_reports.TestElementReportReader.test_get_population) ... ok
test_get_reports_from_population (test_reports.TestElementReportReader.test_get_reports_from_population) ... ok
test_block_gap_limit (test_reports.TestSomaReportReader.test_block_gap_limit) ... ok
test_get_all_population (test_reports.TestSomaReportReader.test_get_all_population) ... ok
test_get_inexistant_population (test_reports.TestSomaReportReader.test_get_inexistant_population) ... HDF5-DIAG: Error detected in HDF5 (1.14.5):
  #000: ../../src/H5G.c line 437 in H5Gopen2(): unable to synchronously open group
    major: Symbol table
    minor: Unable to create file
  #001: ../../src/H5G.c line 399 in H5G__open_api_common(): unable to open group
    major: Symbol table
    minor: Can't open object
  #002: ../../src/H5VLcallback.c line 4354 in H5VL_group_open(): group open failed
    major: Virtual Object Layer
    minor: Can't open object
  #003: ../../src/H5VLcallback.c line 4321 in H5VL__group_open(): group open failed
    major: Virtual Object Layer
    minor: Can't open object
  #004: ../../src/H5VLnative_group.c line 153 in H5VL__native_group_open(): unable to open group
    major: Symbol table
    minor: Can't open object
  #005: ../../src/H5Gint.c line 380 in H5G__open_name(): group not found
    major: Symbol table
    minor: Object not found
  #006: ../../src/H5Gloc.c line 424 in H5G_loc_find(): can't find object
    major: Symbol table
    minor: Object not found
  #007: ../../src/H5Gtraverse.c line 824 in H5G_traverse(): internal path traversal failed
    major: Symbol table
    minor: Object not found
  #008: ../../src/H5Gtraverse.c line 596 in H5G__traverse_real(): traversal operator failed
    major: Symbol table
    minor: Callback failed
  #009: ../../src/H5Gloc.c line 381 in H5G__loc_find_cb(): object 'foobar' doesn't exist
    major: Symbol table
    minor: Object not found
ok
test_get_node_id_element_id_mapping (test_reports.TestSomaReportReader.test_get_node_id_element_id_mapping) ... ok
test_get_population (test_reports.TestSomaReportReader.test_get_population) ... ok
test_get_reports_from_population (test_reports.TestSomaReportReader.test_get_reports_from_population) ... ok
test_getTimes_from_population (test_reports.TestSpikeReader.test_getTimes_from_population) ... ok
test_get_all_populations (test_reports.TestSpikeReader.test_get_all_populations) ... ok
test_get_inexistant_population (test_reports.TestSpikeReader.test_get_inexistant_population) ... HDF5-DIAG: Error detected in HDF5 (1.14.5):
  #000: ../../src/H5G.c line 437 in H5Gopen2(): unable to synchronously open group
    major: Symbol table
    minor: Unable to create file
  #001: ../../src/H5G.c line 399 in H5G__open_api_common(): unable to open group
    major: Symbol table
    minor: Can't open object
  #002: ../../src/H5VLcallback.c line 4354 in H5VL_group_open(): group open failed
    major: Virtual Object Layer
    minor: Can't open object
  #003: ../../src/H5VLcallback.c line 4321 in H5VL__group_open(): group open failed
    major: Virtual Object Layer
    minor: Can't open object
  #004: ../../src/H5VLnative_group.c line 153 in H5VL__native_group_open(): unable to open group
    major: Symbol table
    minor: Can't open object
  #005: ../../src/H5Gint.c line 380 in H5G__open_name(): group not found
    major: Symbol table
    minor: Object not found
  #006: ../../src/H5Gloc.c line 424 in H5G_loc_find(): can't find object
    major: Symbol table
    minor: Object not found
  #007: ../../src/H5Gtraverse.c line 824 in H5G_traverse(): internal path traversal failed
    major: Symbol table
    minor: Object not found
  #008: ../../src/H5Gtraverse.c line 596 in H5G__traverse_real(): traversal operator failed
    major: Symbol table
    minor: Callback failed
  #009: ../../src/H5Gloc.c line 381 in H5G__loc_find_cb(): object 'foobar' doesn't exist
    major: Symbol table
    minor: Object not found
ok
test_get_population (test_reports.TestSpikeReader.test_get_population) ... ok
test_get_spikes_from_population (test_reports.TestSpikeReader.test_get_spikes_from_population) ... ok
----------------------------------------------------------------------
Ran 78 tests in 0.058s
OK
+ popd
~/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: libsonata-0.1.23-13.fc42.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.uyUKL0
+ umask 022
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ cd libsonata-0.1.23
+ DOCDIR=/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/doc/libsonata
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/doc/libsonata
+ cp -pr /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/README.rst /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/doc/libsonata
+ cp -pr /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/CHANGELOG.md /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/doc/libsonata
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.dKz1vu
+ umask 022
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ cd libsonata-0.1.23
+ LICENSEDIR=/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/licenses/libsonata
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/licenses/libsonata
+ cp -pr /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/COPYING.LESSER /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/licenses/libsonata
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: libsonata = 0.1.23-13.fc42 libsonata(x86-64) = 0.1.23-13.fc42 libsonata.so.0.1()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.310()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Processing files: libsonata-devel-0.1.23-13.fc42.x86_64
Provides: libsonata-devel = 0.1.23-13.fc42 libsonata-devel(x86-64) = 0.1.23-13.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libsonata.so.0.1()(64bit)
Processing files: python3-libsonata-0.1.23-13.fc42.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.REztkO
+ umask 022
+ cd /builddir/build/BUILD/libsonata-0.1.23-build
+ cd libsonata-0.1.23
+ DOCDIR=/builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/doc/python3-libsonata
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/doc/python3-libsonata
+ cp -pr /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/README.rst /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/doc/python3-libsonata
+ cp -pr /builddir/build/BUILD/libsonata-0.1.23-build/libsonata-0.1.23/CHANGELOG.md /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT/usr/share/doc/python3-libsonata
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: python-libsonata = 0.1.23-13.fc42 python3-libsonata = 0.1.23-13.fc42 python3-libsonata(x86-64) = 0.1.23-13.fc42 python3.13-libsonata = 0.1.23-13.fc42 python3.13dist(libsonata) = 0.1.23 python3dist(libsonata) = 0.1.23
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.310()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.11)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(numpy) >= 1.17.3 rtld(GNU_HASH)
Processing files: libsonata-debugsource-0.1.23-13.fc42.x86_64
Provides: libsonata-debugsource = 0.1.23-13.fc42 libsonata-debugsource(x86-64) = 0.1.23-13.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: libsonata-debuginfo-0.1.23-13.fc42.x86_64
Provides: debuginfo(build-id) = a542c287f75b75f448bf4eda64e62b42d3e94f6e libsonata-debuginfo = 0.1.23-13.fc42 libsonata-debuginfo(x86-64) = 0.1.23-13.fc42 libsonata.so.0.1.23-0.1.23-13.fc42.x86_64.debug()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: libsonata-debugsource(x86-64) = 0.1.23-13.fc42
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/libsonata-0.1.23-build/BUILDROOT
Wrote: /builddir/build/RPMS/libsonata-devel-0.1.23-13.fc42.x86_64.rpm
Wrote: /builddir/build/RPMS/libsonata-debugsource-0.1.23-13.fc42.x86_64.rpm
Wrote: /builddir/build/RPMS/libsonata-0.1.23-13.fc42.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-libsonata-0.1.23-13.fc42.x86_64.rpm
Wrote: /builddir/build/RPMS/libsonata-debuginfo-0.1.23-13.fc42.x86_64.rpm
Child return code was: 0