Mock Version: 5.9 Mock Version: 5.9 Mock Version: 5.9 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/mmtf-cpp.spec'], chrootPath='/var/lib/mock/f42-build-55184737-6533270/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.zllykp0h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.zllykp0h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '7f601ebb02174b8b8490cdaf3dd87cea', '-D', '/var/lib/mock/f42-build-55184737-6533270/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.zllykp0h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/mmtf-cpp.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721260800 Wrote: /builddir/build/SRPMS/mmtf-cpp-1.1.0-6.fc42.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/mmtf-cpp.spec'], chrootPath='/var/lib/mock/f42-build-55184737-6533270/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.zllykp0h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.zllykp0h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'ac61c122140747eeacab493a031642b5', '-D', '/var/lib/mock/f42-build-55184737-6533270/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.zllykp0h:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target x86_64 --nodeps /builddir/build/SPECS/mmtf-cpp.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721260800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.mlxtGj + umask 022 + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + test -d /builddir/build/BUILD/mmtf-cpp-1.1.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/mmtf-cpp-1.1.0-build + /usr/bin/rm -rf /builddir/build/BUILD/mmtf-cpp-1.1.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/mmtf-cpp-1.1.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/mmtf-cpp-1.1.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.59et5x + umask 022 + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + rm -rf mmtf-cpp-1.1.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/mmtf-cpp-1.1.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd mmtf-cpp-1.1.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.jNRBQL + umask 022 + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd mmtf-cpp-1.1.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -- The CXX compiler identification is GNU 14.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j6 --verbose Change Dir: '/builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j6 /usr/bin/cmake -S/builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0 -B/builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/redhat-linux-build/CMakeFiles /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/redhat-linux-build' gmake[1]: Nothing to be done for 'all'. gmake[1]: Leaving directory '/builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/redhat-linux-build/CMakeFiles 0 + pushd docs ~/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/docs ~/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0 + doxygen warning: Tag 'TCL_SUBST' at line 237 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLANG_ASSISTED_PARSING' at line 1022 of file 'Doxyfile' belongs to an option that was not enabled at compile time. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u", or recompile doxygen with this feature enabled. warning: Tag 'CLANG_OPTIONS' at line 1030 of file 'Doxyfile' belongs to an option that was not enabled at compile time. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u", or recompile doxygen with this feature enabled. warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1048 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1184 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1465 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1753 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1769 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1835 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 1933 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 2113 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2126 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 2135 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2177 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2184 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2405 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Specified markdown mainpage 'README.md' does not exist Doxygen version used: 1.12.0 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include Searching for files in directory /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf Reading and parsing tag files Parsing files Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf.hpp... Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/binary_decoder.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/binary_decoder.hpp... Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/binary_encoder.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/binary_encoder.hpp... Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/decoder.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/decoder.hpp... Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/encoder.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/encoder.hpp... Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/errors.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/errors.hpp... Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/export_helpers.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/export_helpers.hpp... Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/map_decoder.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/map_decoder.hpp... Preprocessing /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/structure_data.hpp... Parsing file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/structure_data.hpp... Reading /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/README.md... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in t/builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/encoder.hpp:57: warning: The following parameters of mmtf::encodeToMap(const StructureData &data, msgpack::zone &m_zone, int32_t coord_divider=1000, int32_t occupancy_b_factor_divider=100, int32_t chain_name_max_length=4) are not documented: parameter 'coord_divider' parameter 'occupancy_b_factor_divider' parameter 'chain_name_max_length' /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/encoder.hpp:43: warning: The following parameters of mmtf::encodeToStream(const StructureData &data, Stream &stream, int32_t coord_divider=1000, int32_t occupancy_b_factor_divider=100, int32_t chain_name_max_length=4) are not documented: parameter 'coord_divider' parameter 'occupancy_b_factor_divider' parameter 'chain_name_max_length' /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/decoder.hpp:70: warning: The following parameters of mmtf::mapDecoderFromBuffer(MapDecoder &mapDecoder, const char *buffer, std::size_t size) are not documented: parameter 'buffer' parameter 'size' /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/decoder.hpp:90: warning: The following parameter of mmtf::mapDecoderFromFile(MapDecoder &mapDecoder, const std::string &filename) is not documented: parameter 'filename' /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/decoder.hpp:80: warning: The following parameter of mmtf::mapDecoderFromStream(MapDecoder &mapDecoder, Stream &stream) is not documented: parameter 'stream' he documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf.hpp... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/binary_decoder.hpp... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/binary_encoder.hpp... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/decoder.hpp... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/encoder.hpp... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/errors.hpp... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/export_helpers.hpp... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/map_decoder.hpp... Generating code for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/structure_data.hpp... Generating file documentation... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/binary_decoder.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/binary_encoder.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/decoder.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/encoder.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/errors.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/export_helpers.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/map_decoder.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/include/mmtf/structure_data.hpp... Generating docs for file /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/README.md... Generating page documentation... Generating group documentation... Generating class documentation... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace mmtf Generating docs for compound mmtf::BinaryDecoder... Generating docs for compound mmtf::BioAssembly... Generating docs for compound mmtf::BondAdder... Generating docs for compound mmtf::DecodeError... Generating docs for compound mmtf::EncodeError... Generating docs for compound mmtf::Entity... Generating docs for compound mmtf::GroupType... Generating docs for compound mmtf::MapDecoder... Generating docs for compound mmtf::StructureData... Generating docs for compound mmtf::Transform... Generating graph info page... Generating directory documentation... Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... type lookup cache used 338/65536 hits=892 misses=349 symbol lookup cache used 336/65536 hits=5613 misses=336 finished... ~/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0 + popd + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.LV8ggn + umask 022 + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + '[' /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/mmtf-cpp-1.1.0-build + mkdir /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd mmtf-cpp-1.1.0 + DESTDIR=/builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "" -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/binary_decoder.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/binary_encoder.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/decoder.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/encoder.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/errors.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/export_helpers.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/map_decoder.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/msgpack_decoders.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/msgpack_encoders.hpp -- Installing: /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/include/mmtf/structure_data.hpp + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j6 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j6 /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT Scanned 4 directories and 11 files, processed 0 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/mmtf-cpp-1.1.0-build/SPECPARTS/rpm-debuginfo.specpart Processing files: mmtf-cpp-devel-1.1.0-6.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.YsJ7mn + umask 022 + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + cd mmtf-cpp-1.1.0 + DOCDIR=/builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/doc/mmtf-cpp-devel + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/doc/mmtf-cpp-devel + cp -pr /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/CHANGELOG.md /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/doc/mmtf-cpp-devel + cp -pr /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/README.md /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/doc/mmtf-cpp-devel + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ffJMNS + umask 022 + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + cd mmtf-cpp-1.1.0 + LICENSEDIR=/builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/licenses/mmtf-cpp-devel + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/licenses/mmtf-cpp-devel + cp -pr /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/LICENSE /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/licenses/mmtf-cpp-devel + RPM_EC=0 ++ jobs -p + exit 0 Provides: mmtf-cpp-devel = 1.1.0-6.fc42 mmtf-cpp-devel(x86-64) = 1.1.0-6.fc42 mmtf-cpp-static = 1.1.0-6.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: mmtf-cpp-doc-1.1.0-6.fc42.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.kJ89NC + umask 022 + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + cd mmtf-cpp-1.1.0 + DOCDIR=/builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/doc/mmtf-cpp-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/doc/mmtf-cpp-doc + cp -pr /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/docs/html /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/doc/mmtf-cpp-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.b6YkUR + umask 022 + cd /builddir/build/BUILD/mmtf-cpp-1.1.0-build + cd mmtf-cpp-1.1.0 + LICENSEDIR=/builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/licenses/mmtf-cpp-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/licenses/mmtf-cpp-doc + cp -pr /builddir/build/BUILD/mmtf-cpp-1.1.0-build/mmtf-cpp-1.1.0/LICENSE /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT/usr/share/licenses/mmtf-cpp-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: mmtf-cpp-doc = 1.1.0-6.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/mmtf-cpp-1.1.0-build/BUILDROOT Wrote: /builddir/build/RPMS/mmtf-cpp-devel-1.1.0-6.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/mmtf-cpp-doc-1.1.0-6.fc42.noarch.rpm Child return code was: 0