Mock Version: 6.0
Mock Version: 6.0
Mock Version: 6.0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target noarch --nodeps /builddir/build/SPECS/python-hdmf.spec'], chrootPath='/var/lib/mock/f43-build-58270922-6563792/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0xffff9c6c1590>timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'])
Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '74321f19844241989f7383fa0e4e606c', '-D', '/var/lib/mock/f43-build-58270922-6563792/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target noarch --nodeps /builddir/build/SPECS/python-hdmf.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: noarch
Building for target noarch
setting SOURCE_DATE_EPOCH=1738713600
Wrote: /builddir/build/SRPMS/python-hdmf-4.0.0-1.fc43.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noclean --target noarch --nodeps /builddir/build/SPECS/python-hdmf.spec'], chrootPath='/var/lib/mock/f43-build-58270922-6563792/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0xffff9c6c1590>timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueraiseExc=FalseprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'])
Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'dbd6263c594744cebb5394d8a4a233aa', '-D', '/var/lib/mock/f43-build-58270922-6563792/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noclean --target noarch --nodeps /builddir/build/SPECS/python-hdmf.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: noarch
Building for target noarch
setting SOURCE_DATE_EPOCH=1738713600
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.ZFzHvt
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.3v6HDj
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ rm -rf hdmf-4.0.0
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/hdmf-4.0.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd hdmf-4.0.0
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ rm -vrf src/hdmf/common/hdmf-common-schema/
removed directory 'src/hdmf/common/hdmf-common-schema/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.0K6lof
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ cd hdmf-4.0.0
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(packaging)'
+ echo 'python3dist(pip) >= 19'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(tomli) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ echo -n
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ LT_SYS_LIBRARY_PATH=/usr/lib:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ RPM_TOXENV=py313
+ FEDORA=43
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/pyproject-wheeldir --output /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-buildrequires -x tqdm,zarr,sparse
Handling hatchling from build-system.requires
Requirement not satisfied: hatchling
Handling hatch-vcs from build-system.requires
Requirement not satisfied: hatch-vcs
Exiting dependency generation pass: build backend
+ cat /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-buildrequires
+ rm -rfv '*.dist-info/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/python-hdmf-4.0.0-1.fc43.buildreqs.nosrc.rpm
Child return code was: 11
Dynamic buildrequires detected
Going to install missing buildrequires. See root.log for details.
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target noarch --nodeps /builddir/build/SPECS/python-hdmf.spec'], chrootPath='/var/lib/mock/f43-build-58270922-6563792/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0xffff9c6c1590>timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueraiseExc=FalseprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'])
Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '479fbd7d97104ab59470f93a05c1405b', '-D', '/var/lib/mock/f43-build-58270922-6563792/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target noarch --nodeps /builddir/build/SPECS/python-hdmf.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: noarch
Building for target noarch
setting SOURCE_DATE_EPOCH=1738713600
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.EgAxVY
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ cd hdmf-4.0.0
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(packaging)'
+ echo 'python3dist(pip) >= 19'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(tomli) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ echo -n
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ LT_SYS_LIBRARY_PATH=/usr/lib:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ RPM_TOXENV=py313
+ FEDORA=43
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/pyproject-wheeldir --output /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-buildrequires -x tqdm,zarr,sparse
Handling hatchling from build-system.requires
Requirement satisfied: hatchling
   (installed: hatchling 1.27.0)
Handling hatch-vcs from build-system.requires
Requirement satisfied: hatch-vcs
   (installed: hatch-vcs 0.4.0)
Handling h5py>=3.1.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement not satisfied: h5py>=3.1.0
Handling jsonschema>=3.2.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement not satisfied: jsonschema>=3.2.0
Handling numpy>=1.19.3 from hook generated metadata: Requires-Dist (hdmf)
Requirement not satisfied: numpy>=1.19.3
Handling pandas>=1.2.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement not satisfied: pandas>=1.2.0
Handling ruamel-yaml>=0.16 from hook generated metadata: Requires-Dist (hdmf)
Requirement not satisfied: ruamel-yaml>=0.16
Handling codespell; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: codespell; extra == 'all'
Handling linkml-runtime>=1.5.5; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: linkml-runtime>=1.5.5; extra == 'all'
Handling matplotlib; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: matplotlib; extra == 'all'
Handling oaklib>=0.5.12; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: oaklib>=0.5.12; extra == 'all'
Handling pre-commit; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pre-commit; extra == 'all'
Handling pytest; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest; extra == 'all'
Handling pytest-cov; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest-cov; extra == 'all'
Handling python-dateutil; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: python-dateutil; extra == 'all'
Handling pyyaml>=6.0.1; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pyyaml>=6.0.1; extra == 'all'
Handling ruff; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: ruff; extra == 'all'
Handling schemasheets>=0.1.23; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: schemasheets>=0.1.23; extra == 'all'
Handling scipy>=1.7; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: scipy>=1.7; extra == 'all'
Handling sphinx-copybutton; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-copybutton; extra == 'all'
Handling sphinx-gallery; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-gallery; extra == 'all'
Handling sphinx-rtd-theme>=1; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-rtd-theme>=1; extra == 'all'
Handling sphinx>=4; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx>=4; extra == 'all'
Handling tox; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tox; extra == 'all'
Handling tqdm>=4.41.0; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tqdm>=4.41.0; extra == 'all'
Handling zarr<3,>=2.12.0; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: zarr<3,>=2.12.0; extra == 'all'
Handling matplotlib; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: matplotlib; extra == 'docs'
Handling sphinx-copybutton; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-copybutton; extra == 'docs'
Handling sphinx-gallery; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-gallery; extra == 'docs'
Handling sphinx-rtd-theme>=1; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-rtd-theme>=1; extra == 'docs'
Handling sphinx>=4; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx>=4; extra == 'docs'
Handling scipy>=1.7; extra == 'sparse' from hook generated metadata: Requires-Dist (hdmf)
Requirement not satisfied: scipy>=1.7; extra == 'sparse'
Handling linkml-runtime>=1.5.5; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: linkml-runtime>=1.5.5; extra == 'termset'
Handling oaklib>=0.5.12; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: oaklib>=0.5.12; extra == 'termset'
Handling pyyaml>=6.0.1; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pyyaml>=6.0.1; extra == 'termset'
Handling schemasheets>=0.1.23; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: schemasheets>=0.1.23; extra == 'termset'
Handling codespell; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: codespell; extra == 'test'
Handling pre-commit; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pre-commit; extra == 'test'
Handling pytest; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest; extra == 'test'
Handling pytest-cov; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest-cov; extra == 'test'
Handling python-dateutil; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: python-dateutil; extra == 'test'
Handling ruff; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: ruff; extra == 'test'
Handling tox; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tox; extra == 'test'
Handling tqdm>=4.41.0; extra == 'tqdm' from hook generated metadata: Requires-Dist (hdmf)
Requirement not satisfied: tqdm>=4.41.0; extra == 'tqdm'
Handling zarr<3,>=2.12.0; extra == 'zarr' from hook generated metadata: Requires-Dist (hdmf)
Requirement not satisfied: zarr<3,>=2.12.0; extra == 'zarr'
+ cat /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-buildrequires
+ rm -rfv hdmf-4.0.0.dist-info/
removed 'hdmf-4.0.0.dist-info/METADATA'
removed directory 'hdmf-4.0.0.dist-info/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/python-hdmf-4.0.0-1.fc43.buildreqs.nosrc.rpm
Child return code was: 11
Dynamic buildrequires detected
Going to install missing buildrequires. See root.log for details.
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target noarch --nodeps /builddir/build/SPECS/python-hdmf.spec'], chrootPath='/var/lib/mock/f43-build-58270922-6563792/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0xffff9c6c1590>timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueraiseExc=FalseprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'])
Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '322b55c2af1045c1927ce97246af797a', '-D', '/var/lib/mock/f43-build-58270922-6563792/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target noarch --nodeps /builddir/build/SPECS/python-hdmf.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: noarch
Building for target noarch
setting SOURCE_DATE_EPOCH=1738713600
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.sTjuES
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ cd hdmf-4.0.0
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(packaging)'
+ echo 'python3dist(pip) >= 19'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(tomli) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ echo -n
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ LT_SYS_LIBRARY_PATH=/usr/lib:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ RPM_TOXENV=py313
+ FEDORA=43
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/pyproject-wheeldir --output /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-buildrequires -x tqdm,zarr,sparse
Handling hatchling from build-system.requires
Requirement satisfied: hatchling
   (installed: hatchling 1.27.0)
Handling hatch-vcs from build-system.requires
Requirement satisfied: hatch-vcs
   (installed: hatch-vcs 0.4.0)
Handling h5py>=3.1.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: h5py>=3.1.0
   (installed: h5py 3.12.1)
Handling jsonschema>=3.2.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: jsonschema>=3.2.0
   (installed: jsonschema 4.23.0)
Handling numpy>=1.19.3 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: numpy>=1.19.3
   (installed: numpy 2.2.4)
Handling pandas>=1.2.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: pandas>=1.2.0
   (installed: pandas 2.2.3)
Handling ruamel-yaml>=0.16 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: ruamel-yaml>=0.16
   (installed: ruamel-yaml 0.18.10)
Handling codespell; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: codespell; extra == 'all'
Handling linkml-runtime>=1.5.5; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: linkml-runtime>=1.5.5; extra == 'all'
Handling matplotlib; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: matplotlib; extra == 'all'
Handling oaklib>=0.5.12; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: oaklib>=0.5.12; extra == 'all'
Handling pre-commit; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pre-commit; extra == 'all'
Handling pytest; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest; extra == 'all'
Handling pytest-cov; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest-cov; extra == 'all'
Handling python-dateutil; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: python-dateutil; extra == 'all'
Handling pyyaml>=6.0.1; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pyyaml>=6.0.1; extra == 'all'
Handling ruff; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: ruff; extra == 'all'
Handling schemasheets>=0.1.23; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: schemasheets>=0.1.23; extra == 'all'
Handling scipy>=1.7; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: scipy>=1.7; extra == 'all'
Handling sphinx-copybutton; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-copybutton; extra == 'all'
Handling sphinx-gallery; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-gallery; extra == 'all'
Handling sphinx-rtd-theme>=1; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-rtd-theme>=1; extra == 'all'
Handling sphinx>=4; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx>=4; extra == 'all'
Handling tox; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tox; extra == 'all'
Handling tqdm>=4.41.0; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tqdm>=4.41.0; extra == 'all'
Handling zarr<3,>=2.12.0; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: zarr<3,>=2.12.0; extra == 'all'
Handling matplotlib; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: matplotlib; extra == 'docs'
Handling sphinx-copybutton; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-copybutton; extra == 'docs'
Handling sphinx-gallery; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-gallery; extra == 'docs'
Handling sphinx-rtd-theme>=1; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-rtd-theme>=1; extra == 'docs'
Handling sphinx>=4; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx>=4; extra == 'docs'
Handling scipy>=1.7; extra == 'sparse' from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: scipy>=1.7; extra == 'sparse'
   (installed: scipy 1.14.1)
Handling linkml-runtime>=1.5.5; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: linkml-runtime>=1.5.5; extra == 'termset'
Handling oaklib>=0.5.12; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: oaklib>=0.5.12; extra == 'termset'
Handling pyyaml>=6.0.1; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pyyaml>=6.0.1; extra == 'termset'
Handling schemasheets>=0.1.23; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: schemasheets>=0.1.23; extra == 'termset'
Handling codespell; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: codespell; extra == 'test'
Handling pre-commit; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pre-commit; extra == 'test'
Handling pytest; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest; extra == 'test'
Handling pytest-cov; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest-cov; extra == 'test'
Handling python-dateutil; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: python-dateutil; extra == 'test'
Handling ruff; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: ruff; extra == 'test'
Handling tox; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tox; extra == 'test'
Handling tqdm>=4.41.0; extra == 'tqdm' from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: tqdm>=4.41.0; extra == 'tqdm'
   (installed: tqdm 4.67.1)
Handling zarr<3,>=2.12.0; extra == 'zarr' from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: zarr<3,>=2.12.0; extra == 'zarr'
   (installed: zarr 2.18.4)
+ cat /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-buildrequires
+ rm -rfv hdmf-4.0.0.dist-info/
removed 'hdmf-4.0.0.dist-info/METADATA'
removed directory 'hdmf-4.0.0.dist-info/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Wrote: /builddir/build/SRPMS/python-hdmf-4.0.0-1.fc43.buildreqs.nosrc.rpm
Child return code was: 11
Dynamic buildrequires detected
Going to install missing buildrequires. See root.log for details.
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --noclean --target noarch /builddir/build/SPECS/python-hdmf.spec'], chrootPath='/var/lib/mock/f43-build-58270922-6563792/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0xffff9c6c1590>timeout=201600uid=1000gid=425user='mockbuild'unshare_net=TrueprintOutput=Falsenspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'])
Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '4e6d3cd178f7449384e9369cb736fd75', '-D', '/var/lib/mock/f43-build-58270922-6563792/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.dlgdib48:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --noclean --target noarch /builddir/build/SPECS/python-hdmf.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: noarch
Building for target noarch
setting SOURCE_DATE_EPOCH=1738713600
Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.xK9DNU
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ cd hdmf-4.0.0
+ echo pyproject-rpm-macros
+ echo python3-devel
+ echo 'python3dist(packaging)'
+ echo 'python3dist(pip) >= 19'
+ '[' -f pyproject.toml ']'
+ echo '(python3dist(tomli) if python3-devel < 3.11)'
+ rm -rfv '*.dist-info/'
+ '[' -f /usr/bin/python3 ']'
+ mkdir -p /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ echo -n
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ LT_SYS_LIBRARY_PATH=/usr/lib:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ RPM_TOXENV=py313
+ FEDORA=43
+ HOSTNAME=rpmbuild
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/pyproject-wheeldir --output /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-buildrequires -x tqdm,zarr,sparse
Handling hatchling from build-system.requires
Requirement satisfied: hatchling
   (installed: hatchling 1.27.0)
Handling hatch-vcs from build-system.requires
Requirement satisfied: hatch-vcs
   (installed: hatch-vcs 0.4.0)
Handling h5py>=3.1.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: h5py>=3.1.0
   (installed: h5py 3.12.1)
Handling jsonschema>=3.2.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: jsonschema>=3.2.0
   (installed: jsonschema 4.23.0)
Handling numpy>=1.19.3 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: numpy>=1.19.3
   (installed: numpy 2.2.4)
Handling pandas>=1.2.0 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: pandas>=1.2.0
   (installed: pandas 2.2.3)
Handling ruamel-yaml>=0.16 from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: ruamel-yaml>=0.16
   (installed: ruamel-yaml 0.18.10)
Handling codespell; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: codespell; extra == 'all'
Handling linkml-runtime>=1.5.5; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: linkml-runtime>=1.5.5; extra == 'all'
Handling matplotlib; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: matplotlib; extra == 'all'
Handling oaklib>=0.5.12; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: oaklib>=0.5.12; extra == 'all'
Handling pre-commit; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pre-commit; extra == 'all'
Handling pytest; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest; extra == 'all'
Handling pytest-cov; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest-cov; extra == 'all'
Handling python-dateutil; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: python-dateutil; extra == 'all'
Handling pyyaml>=6.0.1; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pyyaml>=6.0.1; extra == 'all'
Handling ruff; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: ruff; extra == 'all'
Handling schemasheets>=0.1.23; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: schemasheets>=0.1.23; extra == 'all'
Handling scipy>=1.7; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: scipy>=1.7; extra == 'all'
Handling sphinx-copybutton; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-copybutton; extra == 'all'
Handling sphinx-gallery; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-gallery; extra == 'all'
Handling sphinx-rtd-theme>=1; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-rtd-theme>=1; extra == 'all'
Handling sphinx>=4; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx>=4; extra == 'all'
Handling tox; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tox; extra == 'all'
Handling tqdm>=4.41.0; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tqdm>=4.41.0; extra == 'all'
Handling zarr<3,>=2.12.0; extra == 'all' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: zarr<3,>=2.12.0; extra == 'all'
Handling matplotlib; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: matplotlib; extra == 'docs'
Handling sphinx-copybutton; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-copybutton; extra == 'docs'
Handling sphinx-gallery; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-gallery; extra == 'docs'
Handling sphinx-rtd-theme>=1; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx-rtd-theme>=1; extra == 'docs'
Handling sphinx>=4; extra == 'docs' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: sphinx>=4; extra == 'docs'
Handling scipy>=1.7; extra == 'sparse' from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: scipy>=1.7; extra == 'sparse'
   (installed: scipy 1.14.1)
Handling linkml-runtime>=1.5.5; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: linkml-runtime>=1.5.5; extra == 'termset'
Handling oaklib>=0.5.12; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: oaklib>=0.5.12; extra == 'termset'
Handling pyyaml>=6.0.1; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pyyaml>=6.0.1; extra == 'termset'
Handling schemasheets>=0.1.23; extra == 'termset' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: schemasheets>=0.1.23; extra == 'termset'
Handling codespell; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: codespell; extra == 'test'
Handling pre-commit; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pre-commit; extra == 'test'
Handling pytest; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest; extra == 'test'
Handling pytest-cov; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: pytest-cov; extra == 'test'
Handling python-dateutil; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: python-dateutil; extra == 'test'
Handling ruff; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: ruff; extra == 'test'
Handling tox; extra == 'test' from hook generated metadata: Requires-Dist (hdmf)
Ignoring alien requirement: tox; extra == 'test'
Handling tqdm>=4.41.0; extra == 'tqdm' from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: tqdm>=4.41.0; extra == 'tqdm'
   (installed: tqdm 4.67.1)
Handling zarr<3,>=2.12.0; extra == 'zarr' from hook generated metadata: Requires-Dist (hdmf)
Requirement satisfied: zarr<3,>=2.12.0; extra == 'zarr'
   (installed: zarr 2.18.4)
+ cat /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-buildrequires
+ rm -rfv hdmf-4.0.0.dist-info/
removed 'hdmf-4.0.0.dist-info/METADATA'
removed directory 'hdmf-4.0.0.dist-info/'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.9bu8mw
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd hdmf-4.0.0
+ mkdir -p /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ VALAFLAGS=-g
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ LT_SYS_LIBRARY_PATH=/usr/lib:
+ CC=gcc
+ CXX=g++
+ TMPDIR=/builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/pyproject-wheeldir
Processing /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0
  Preparing metadata (pyproject.toml): started
  Running command Preparing metadata (pyproject.toml)
  Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: hdmf
  Building wheel for hdmf (pyproject.toml): started
  Running command Building wheel for hdmf (pyproject.toml)
  Building wheel for hdmf (pyproject.toml): finished with status 'done'
  Created wheel for hdmf: filename=hdmf-4.0.0-py3-none-any.whl size=198117 sha256=72f159dbae9a4446ef7ceee64d5afd6fd4429b39a3226d3b189688afe2dcb6ce
  Stored in directory: /builddir/.cache/pip/wheels/90/70/6d/ec8491053522ec7cd655ff1846c5dd7d9642678f7c26847ec2
Successfully built hdmf
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.F78VZJ
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ '[' /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT
++ dirname /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/python-hdmf-4.0.0-build
+ mkdir /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd hdmf-4.0.0
++ ls /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/pyproject-wheeldir/hdmf-4.0.0-py3-none-any.whl
++ xargs basename --multiple
++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/'
+ specifier=hdmf==4.0.0
+ '[' -z hdmf==4.0.0 ']'
+ TMPDIR=/builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir
+ /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/pyproject-wheeldir hdmf==4.0.0
Using pip 25.0.1 from /usr/lib/python3.13/site-packages/pip (python 3.13)
Looking in links: /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/pyproject-wheeldir
Processing ./pyproject-wheeldir/hdmf-4.0.0-py3-none-any.whl
Installing collected packages: hdmf
  Creating /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/bin
  changing mode of /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/bin/validate_hdmf_spec to 755
Successfully installed hdmf-4.0.0
+ '[' -d /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/bin ']'
+ '[' -z sP ']'
+ shebang_flags=-kasP
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/bin/validate_hdmf_spec
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/bin/validate_hdmf_spec: updating
+ rm -rfv /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/bin/__pycache__
+ rm -f /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-ghost-distinfo
+ site_dirs=()
+ '[' -d /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']'
+ site_dirs+=("/usr/lib/python3.13/site-packages")
+ '[' /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']'
+ '[' -d /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib64/python3.13/site-packages ']'
+ for site_dir in ${site_dirs[@]}
+ for distinfo in /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT$site_dir/*.dist-info
+ echo '%ghost /usr/lib/python3.13/site-packages/hdmf-4.0.0.dist-info'
+ sed -i s/pip/rpm/ /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf-4.0.0.dist-info/INSTALLER
+ PYTHONPATH=/usr/lib/rpm/redhat
+ /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT --record /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf-4.0.0.dist-info/RECORD --output /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-record
+ rm -fv /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf-4.0.0.dist-info/RECORD
removed '/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf-4.0.0.dist-info/RECORD'
+ rm -fv /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf-4.0.0.dist-info/REQUESTED
removed '/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf-4.0.0.dist-info/REQUESTED'
++ wc -l /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-ghost-distinfo
++ cut -f1 '-d '
+ lines=1
+ '[' 1 -ne 1 ']'
+ RPM_FILES_ESCAPE=4.19
+ /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-files --output-modules /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-modules --buildroot /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-hdmf-4.0.0-build/python-hdmf-4.0.0-1.fc43.noarch-pyproject-record --prefix /usr hdmf
+ ln -s /usr/share/hdmf-common-schema/ /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/hdmf-common-schema
+ install -t /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/share/man/man1 -D -p -m 0644 /builddir/build/SOURCES/validate_hdmf_spec.1
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip /usr/bin/strip
+ /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
*** WARNING: ./usr/lib/python3.13/site-packages/hdmf/testing/validate_spec.py is executable but has no shebang, removing executable bit
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j12
Bytecompiling .py files below /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13 using python3.13
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j12 /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/backends/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/backends/hdf5/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/backends/__pycache__/errors.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/backends/__pycache__/warnings.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/build/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/backends/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/build/__pycache__/warnings.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/build/__pycache__/errors.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/io/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/backends/__pycache__/io.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/io/__pycache__/resources.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/io/__pycache__/alignedtable.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/io/__pycache__/multi.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/__pycache__/multi.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/__pycache__/sparse.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/__pycache__/hierarchicaltable.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/io/__pycache__/table.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/build/__pycache__/builders.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/spec/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/backends/hdf5/__pycache__/h5_utils.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/build/__pycache__/classgenerator.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/__pycache__/alignedtable.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/spec/__pycache__/catalog.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/testing/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/testing/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/validate/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/testing/__pycache__/validate_spec.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/__pycache__/resources.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/spec/__pycache__/write.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/testing/__pycache__/testcase.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/validate/__pycache__/errors.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/_version.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/_due.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/monitor.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/query.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/build/__pycache__/objectmapper.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/backends/hdf5/__pycache__/h5tools.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/build/__pycache__/manager.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/term_set.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/validate/__pycache__/validator.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/__pycache__/table.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/spec/__pycache__/namespace.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/common/__pycache__/table.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/validate/__pycache__/validator.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/spec/__pycache__/spec.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/data_utils.cpython-313.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/data_utils.cpython-313.pyc: replacing with normalized version
/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/__pycache__/container.cpython-313.pyc: rewriting with normalized contents
Scanned 28 directories and 151 files,
               processed 52 inodes,
               51 modified (6 replaced + 45 rewritten),
               0 unsupported format, 0 errors
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.kWNNrv
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd hdmf-4.0.0
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1  '
+ PATH=/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
+ PYTHONPATH=/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages
+ PYTHONDONTWRITEBYTECODE=1
+ PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/.pyproject-builddir'
+ PYTEST_XDIST_AUTO_NUM_WORKERS=12
+ /usr/bin/pytest -v -rs
============================= test session starts ==============================
platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3
cachedir: .pytest_cache
rootdir: /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0
configfile: pyproject.toml
collecting ... collected 1570 items
tests/unit/back_compat_tests/test_1_1_0.py::Test1_1_0::test_append_1_0_5 PASSED [  0%]
tests/unit/back_compat_tests/test_1_1_0.py::Test1_1_0::test_read_1_0_5 PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestUnwrapTermSetWrapperBuild::test_unwrap SKIPPED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildGroupAddedAttr::test_build_added_attr PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildGroupRefinedAttr::test_build_refined_attr PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetAddedAttrs::test_build_added_attr PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetRefinedDtype::test_build_refined_dtype_convert PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetNotRefinedDtype::test_build_correct_dtype PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetNotRefinedDtype::test_build_incorrect_dtype PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetOneOptionBadShapeUnspecified1::test_build PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetOneOptionBadShapeUnspecified2::test_build PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetTwoOptionsBadShapeUnspecified::test_build PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetDimensionLabelsUnspecified::test_build PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetDimensionLabelsOneOption::test_build PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetDimensionLabelsTwoOptionsOneMatch::test_build PASSED [  0%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetDimensionLabelsTwoOptionsTwoMatches::test_build PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build.py::TestBuildDatasetDimensionLabelsOneOptionRefined::test_build PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_datetime.py::TestBuildDatasetDateTime::test_date_array PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_datetime.py::TestBuildDatasetDateTime::test_date_scalar PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_datetime.py::TestBuildDatasetDateTime::test_datetime_array PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_datetime.py::TestBuildDatasetDateTime::test_datetime_scalar PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildZeroOrManyTypeIncUntypedGroup::test_build_mismatch PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildZeroOrManyTypeIncUntypedGroup::test_build_one PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildZeroOrManyTypeIncUntypedGroup::test_build_two PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildZeroOrManyTypeIncUntypedGroup::test_build_zero PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildOneOrManyTypeIncUntypedGroup::test_build_mismatch PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildOneOrManyTypeIncUntypedGroup::test_build_one PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildOneOrManyTypeIncUntypedGroup::test_build_two PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildOneOrManyTypeIncUntypedGroup::test_build_zero PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildOneTypeIncUntypedGroup::test_build_mismatch PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildOneTypeIncUntypedGroup::test_build_one PASSED [  1%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildOneTypeIncUntypedGroup::test_build_two PASSED [  2%]
tests/unit/build_tests/mapper_tests/test_build_quantity.py::TestBuildOneTypeIncUntypedGroup::test_build_zero PASSED [  2%]
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tests/unit/build_tests/test_io_map.py::TestTypeMap::test_get_map_register PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestTypeMap::test_get_map_unique_mappers PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_1d PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_1d_h5py_2_dataset SKIPPED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_1d_h5py_3_dataset PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_2d_lol PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_2d_ndarray PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_3d_h5py_2_dataset SKIPPED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_3d_h5py_3_dataset PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_3d_lol PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_3d_ndarray PASSED [ 15%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_dataio PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestMapStrings::test_build_scalar PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNested::test_build PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNested::test_construct PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNested::test_default_mapping PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNested::test_default_mapping_keys PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNested::test_remap_keys PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNoNesting::test_build PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNoNesting::test_build_empty PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNoNesting::test_construct PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNoNesting::test_default_mapping PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperNoNesting::test_default_mapping_keys PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperContainer::test_default_mapping PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperContainer::test_default_mapping_keys PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestLinkedContainer::test_build_broken_link_no_parent PASSED [ 16%]
tests/unit/build_tests/test_io_map.py::TestLinkedContainer::test_build_broken_link_parent XFAIL [ 17%]
tests/unit/build_tests/test_io_map.py::TestLinkedContainer::test_build_child_link PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestReference::test_build_attr_ref PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestReference::test_build_attr_ref_invalid PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestMissingRequiredAttribute::test_default_mapping PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestMissingRequiredAttribute::test_required_attr_missing PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestMissingRequiredAttributeRef::test_default_mapping PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestMissingRequiredAttributeRef::test_required_attr_ref_missing PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestMissingRequiredDataset::test_default_mapping PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestMissingRequiredDataset::test_required_dataset_missing PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestMissingRequiredGroup::test_default_mapping PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestMissingRequiredGroup::test_required_group_missing PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestRequiredEmptyGroup::test_default_mapping PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestRequiredEmptyGroup::test_required_group_empty PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestOptionalEmptyGroup::test_default_mapping PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestOptionalEmptyGroup::test_optional_group_empty PASSED [ 17%]
tests/unit/build_tests/test_io_map.py::TestOptionalEmptyGroup::test_optional_group_not_empty PASSED [ 18%]
tests/unit/build_tests/test_io_map.py::TestFixedAttributeValue::test_default_mapping PASSED [ 18%]
tests/unit/build_tests/test_io_map.py::TestFixedAttributeValue::test_required_attr_missing PASSED [ 18%]
tests/unit/build_tests/test_io_map.py::TestObjectMapperBadValue::test_bad_value PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataMap::test_append PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataMap::test_build PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataMap::test_build_empty_data PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataMap::test_extend PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataMapScalar::test_construct_scalar_dataset PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataMapScalarCompound::test_construct_scalar_compound_dataset PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestBuildUntypedDatasetOfReferences::test_build PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestBuildCompoundDatasetOfReferences::test_build PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestBuildTypedDatasetOfReferences::test_build PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestBuildDatasetOfReferencesUnbuiltTarget::test_build PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataIOEdgeCases::test_build_datachunkiterator PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataIOEdgeCases::test_build_dataio PASSED [ 18%]
tests/unit/build_tests/test_io_map_data.py::TestDataIOEdgeCases::test_build_dataio_datachunkiterator PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_add_category PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_add_category_already_in_table PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_add_category_misaligned_rows PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_add_column PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_add_column_bad_category PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_add_column_bad_length PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_add_column_to_subcategory PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_add_row PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_dynamictable_region_to_aligneddynamictable PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_get_colnames PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_get_item PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_categories_without_category_tables_error PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_category_table_names_do_not_match_categories PASSED [ 19%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_duplicate_category_table_name PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_length_mismatch_between_categories_and_category_tables PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_misaligned_category_tables PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_with_bad_custom_categories PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_with_custom_empty_categories PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_with_custom_misaligned_categories PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_with_custom_nonempty_categories PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_with_custom_nonempty_categories_and_main PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_init_with_duplicate_custom_categories PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_nested_aligned_dynamic_table_not_allowed PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_round_trip_container PASSED [ 20%]
tests/unit/common/test_alignedtable.py::TestAlignedDynamicTableContainer::test_to_dataframe PASSED [ 20%]
tests/unit/common/test_common.py::TestCommonTypeMap::test_base_types PASSED [ 20%]
tests/unit/common/test_common.py::TestCommonTypeMap::test_copy_ts_config PASSED [ 20%]
tests/unit/common/test_common_io.py::TestCacheSpec::test_write_cache_spec PASSED [ 20%]
tests/unit/common/test_common_io.py::TestCacheSpec::test_write_cache_spec_injected PASSED [ 20%]
tests/unit/common/test_common_io.py::TestCacheSpec::test_write_no_cache_spec PASSED [ 21%]
tests/unit/common/test_common_io.py::TestGetHdf5IO::test_gethdf5io PASSED [ 21%]
tests/unit/common/test_common_io.py::TestGetHdf5IO::test_gethdf5io_manager PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_add_custom_dtr_column PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_attribute PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_custom_dtr_class PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_dynamic_column PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_dynamic_table PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_dynamic_table_region PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_dynamic_table_region_bad_target_col PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_dynamic_table_region_non_dtr_target PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_dynamic_table_region_optional PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_forbids_incorrect_col PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_optional_col PASSED [ 21%]
tests/unit/common/test_generate_table.py::TestDynamicDynamicTable::test_roundtrip PASSED [ 21%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_get_foreign_column_in_main_and_category_table PASSED [ 21%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_get_foreign_columns PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_get_foreign_columns_none PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_get_linked_tables PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_get_linked_tables_complex_link PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_get_linked_tables_none PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_get_linked_tables_simple_link PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_has_foreign_column_in_main_table PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_has_foreign_columns_false PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_has_foreign_columns_in_category_tables PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestLinkedAlignedDynamicTables::test_to_hierarchical_dataframe PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_drop_id_columns PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_flatten_column_index PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_flatten_column_index_already_flat_index PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_flatten_column_index_bad_maxlevels PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_to_hierarchical_dataframe PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_to_hierarchical_dataframe_empty_tables PASSED [ 22%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_to_hierarchical_dataframe_flat_table PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_to_hierarchical_dataframe_indexed_data_list PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_to_hierarchical_dataframe_indexed_data_nparray PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_to_hierarchical_dataframe_indexed_dtr_on_last_level PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_to_hierarchical_dataframe_multilevel PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestHierarchicalTable::test_to_hierarchical_dataframe_no_dtr_on_top_level PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestLinkedDynamicTables::test_get_foreign_columns PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestLinkedDynamicTables::test_get_linked_tables PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestLinkedDynamicTables::test_has_foreign_columns PASSED [ 23%]
tests/unit/common/test_linkedtables.py::TestLinkedDynamicTables::test_populate_table_hierarchy PASSED [ 23%]
tests/unit/common/test_multi.py::SimpleMultiContainerRoundTrip::test_roundtrip PASSED [ 23%]
tests/unit/common/test_multi.py::SimpleMultiContainerRoundTrip::test_roundtrip_export PASSED [ 23%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref PASSED       [ 23%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_attribute PASSED [ 23%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_column_as_attribute PASSED [ 23%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_compound_data PASSED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_container_attr SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_container_data SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_same_key_diff_objfield PASSED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_same_keyname PASSED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_search_for_file PASSED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_search_for_file_error PASSED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_search_for_file_nested_parent PASSED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_search_for_file_parent PASSED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_termset SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_termset_attribute_none SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_termset_bulk SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_termset_data_object_error SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_termset_data_object_list SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_termset_missing_file_error SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_termset_missing_terms SKIPPED [ 24%]
tests/unit/common/test_resources.py::TestHERD::test_add_ref_two_keys PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_assert_external_resources_equal PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_check_object_field_add PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_check_object_field_multi_error PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_check_object_field_multi_files PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_check_object_field_not_in_obj_table PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_check_termset_wrapper SKIPPED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_entity_uri_error PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_entity_uri_warning PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_get_entity PASSED    [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_get_file_from_container PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_get_file_from_container_error PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_get_file_from_container_file_is_container PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_get_obj_entities PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_get_obj_entities_attribute PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_get_obj_entities_file_none_container PASSED [ 25%]
tests/unit/common/test_resources.py::TestHERD::test_get_obj_entities_file_none_error PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_get_obj_entities_file_none_not_container_deep_nested PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_get_obj_entities_file_none_not_container_nested PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_get_object_type PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_get_object_type_all_instances PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_get_zip_directory PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_invalid_entity_assert_external_resources_equal PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_invalid_keys_assert_external_resources_equal PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_invalid_object_keys_assert_external_resources_equal PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_invalid_objects_assert_external_resources_equal PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_key_without_entity_error PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_object_key_existing_key_new_object PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_object_key_unqiueness PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_resuse_entity_different_key PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_reuse_key_reuse_entity_new PASSED [ 26%]
tests/unit/common/test_resources.py::TestHERD::test_reuse_key_string PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERD::test_to_and_from_zip PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERD::test_to_and_from_zip_entity_key_value_error_entity PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERD::test_to_and_from_zip_entity_key_value_error_key PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERD::test_to_and_from_zip_entity_value_error PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERD::test_to_and_from_zip_object_keys_key_idx_value_error PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERD::test_to_and_from_zip_object_keys_object_idx_value_error PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERD::test_to_and_from_zip_object_value_error PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERD::test_to_dataframe PASSED  [ 27%]
tests/unit/common/test_resources.py::TestHERDNestedAttributes::test_add_ref_deep_nested PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERDNestedAttributes::test_add_ref_nested PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key_bad_arg PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key_file_container_provided PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key_multiple PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key_no_file_container_provided PASSED [ 27%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key_no_file_deep_nested_container_provided PASSED [ 28%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key_no_file_error PASSED [ 28%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key_no_file_nested_container_provided PASSED [ 28%]
tests/unit/common/test_resources.py::TestHERDGetKey::test_get_key_no_key_found PASSED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrixNoScipy::test_import_error SKIPPED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_2d_data PASSED     [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_array_bad_dim PASSED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_constructor_bad_indices PASSED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_constructor_bad_indices_dim PASSED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_constructor_bad_shape PASSED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_constructor_indices_missing PASSED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_from_dense_2D_array PASSED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_from_sparse_matrix PASSED [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_getattrs PASSED    [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_to_spmat PASSED    [ 28%]
tests/unit/common/test_sparse.py::TestCSRMatrix::test_valueerror_from_ndarray PASSED [ 28%]
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tests/unit/common/test_table.py::TestSelectionList::test_to_dataframe PASSED [ 43%]
tests/unit/common/test_table.py::TestSelectionList::test_to_dataframe_nested PASSED [ 43%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_array PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_array_nested PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_array_no_df PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_array_single PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_array_single_nested PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_array_single_no_df PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_list PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_list_nested PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_list_no_df PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_list_single PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_list_single_nested PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_list_single_no_df PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_single_item PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_single_item_nested PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_single_item_no_df PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_slice PASSED [ 44%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_slice_nested PASSED [ 45%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_slice_no_df PASSED [ 45%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_slice_single PASSED [ 45%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_slice_single_nested PASSED [ 45%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_slice_single_no_df PASSED [ 45%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_to_dataframe PASSED [ 45%]
tests/unit/common/test_table.py::TestSelectionH5Dataset::test_to_dataframe_nested PASSED [ 45%]
tests/unit/common/test_table.py::TestVectorIndex::test_init_data PASSED  [ 45%]
tests/unit/common/test_table.py::TestVectorIndex::test_init_empty PASSED [ 45%]
tests/unit/common/test_table.py::TestDoubleIndex::test_add_vector PASSED [ 45%]
tests/unit/common/test_table.py::TestDoubleIndex::test_index PASSED      [ 45%]
tests/unit/common/test_table.py::TestDTDoubleIndex::test_double_index PASSED [ 45%]
tests/unit/common/test_table.py::TestDTDoubleIndex::test_double_index_colnames PASSED [ 45%]
tests/unit/common/test_table.py::TestDTDoubleIndex::test_double_index_reverse PASSED [ 45%]
tests/unit/common/test_table.py::TestDTDoubleIndex::test_double_index_reverse_colnames PASSED [ 45%]
tests/unit/common/test_table.py::TestDTDoubleIndexSkipMiddle::test_index PASSED [ 45%]
tests/unit/common/test_table.py::TestDynamicTableAddIndexRoundTrip::test_roundtrip PASSED [ 46%]
tests/unit/common/test_table.py::TestDynamicTableAddIndexRoundTrip::test_roundtrip_export PASSED [ 46%]
tests/unit/common/test_table.py::TestDynamicTableAddEnumRoundTrip::test_roundtrip PASSED [ 46%]
tests/unit/common/test_table.py::TestDynamicTableAddEnumRoundTrip::test_roundtrip_export PASSED [ 46%]
tests/unit/common/test_table.py::TestDynamicTableAddEnum::test_enum PASSED [ 46%]
tests/unit/common/test_table.py::TestDynamicTableAddEnum::test_enum_index PASSED [ 46%]
tests/unit/common/test_table.py::TestDynamicTableInitIndexRoundTrip::test_roundtrip PASSED [ 46%]
tests/unit/common/test_table.py::TestDynamicTableInitIndexRoundTrip::test_roundtrip_export PASSED [ 46%]
tests/unit/common/test_table.py::TestDoubleIndexRoundtrip::test_roundtrip PASSED [ 46%]
tests/unit/common/test_table.py::TestDoubleIndexRoundtrip::test_roundtrip_export PASSED [ 46%]
tests/unit/common/test_table.py::TestDataIOColumns::test_roundtrip PASSED [ 46%]
tests/unit/common/test_table.py::TestDataIOColumns::test_roundtrip_export PASSED [ 46%]
tests/unit/common/test_table.py::TestDataIOIndexedColumns::test_roundtrip PASSED [ 46%]
tests/unit/common/test_table.py::TestDataIOIndexedColumns::test_roundtrip_export PASSED [ 46%]
tests/unit/common/test_table.py::TestDataIOIndex::test_append PASSED     [ 46%]
tests/unit/common/test_table.py::TestDataIOIndex::test_roundtrip PASSED  [ 47%]
tests/unit/common/test_table.py::TestDataIOIndex::test_roundtrip_export PASSED [ 47%]
tests/unit/common/test_table.py::TestDTRReferences::test_dtr_references PASSED [ 47%]
tests/unit/common/test_table.py::TestDataIOReferences::test_append PASSED [ 47%]
tests/unit/common/test_table.py::TestDataIOReferences::test_roundtrip PASSED [ 47%]
tests/unit/common/test_table.py::TestDataIOReferences::test_roundtrip_export PASSED [ 47%]
tests/unit/common/test_table.py::TestVectorIndexDtype::test_array_inc_precision PASSED [ 47%]
tests/unit/common/test_table.py::TestVectorIndexDtype::test_array_inc_precision_1step PASSED [ 47%]
tests/unit/common/test_table.py::TestVectorIndexDtype::test_array_inc_precision_2steps PASSED [ 47%]
tests/unit/common/test_table.py::TestVectorIndexDtype::test_array_prev_data_inc_precision_2steps PASSED [ 47%]
tests/unit/common/test_table.py::TestVectorIndexDtype::test_list_inc_precision PASSED [ 47%]
tests/unit/common/test_table.py::TestVectorIndexDtype::test_list_inc_precision_1step PASSED [ 47%]
tests/unit/common/test_table.py::TestVectorIndexDtype::test_list_inc_precision_2steps PASSED [ 47%]
tests/unit/common/test_table.py::TestVectorIndexDtype::test_list_prev_data_inc_precision_2steps PASSED [ 47%]
tests/unit/common/test_table.py::TestDynamicTableSubclassColumns::test_columns PASSED [ 47%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_both_value_and_default_value_set PASSED [ 47%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_build_spec PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_build_spec_no_doc PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_build_spec_reftype PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_build_warn_extra_args PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_colliding_shape_and_dims PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_constructor PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_default_value PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_dims_without_shape PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_invalid_dtype PASSED [ 48%]
tests/unit/spec_tests/test_attribute_spec.py::AttributeSpecTests::test_shape PASSED [ 48%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_build_warn_extra_args PASSED [ 48%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor PASSED [ 48%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_datatype PASSED [ 48%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_default_value PASSED [ 48%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_invalid_table PASSED [ 48%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_invalidate_dtype PASSED [ 48%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_ref_spec PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_shape PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_table PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_validates_default_name PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_validates_name PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_constructor_value PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_data_type_property_value PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_datatype_extension PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_datatype_extension_groupspec PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_datatype_table_extension PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_datatype_table_extension_diff_format PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_datatype_table_extension_higher_precision PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_datatype_table_extension_lower_precision PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_name_with_compatible_quantity PASSED [ 49%]
tests/unit/spec_tests/test_dataset_spec.py::DatasetSpecTests::test_name_with_incompatible_quantity PASSED [ 49%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecHelper::test_check_dtype_bad PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecHelper::test_check_dtype_ok PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecHelper::test_check_dtype_ref PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecHelper::test_recommended_dtypes PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecHelper::test_simplify_cpd_type PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecHelper::test_simplify_cpd_type_ref PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecHelper::test_valid_primary_dtypes PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecTests::test_build_spec PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecTests::test_constructor PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecTests::test_invalid_dtype PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecTests::test_invalid_refspec_dict PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecTests::test_is_ref PASSED [ 50%]
tests/unit/spec_tests/test_dtype_spec.py::DtypeSpecTests::test_refspec_dtype PASSED [ 50%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_add_attribute PASSED [ 50%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_add_group PASSED [ 50%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_add_link PASSED [ 50%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_build_warn_extra_args PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_constructor PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_constructor_datatype PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_data_type_property_value PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_get_data_type_spec PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_get_namespace_spec PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_path PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_path_complicated PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_path_no_name PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_set_dataset PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_set_group PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_set_link PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_set_parent_exists PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_type_extension PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecTests::test_update_attribute_spec PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::TestNotAllowedConfig::test_name_with_multiple PASSED [ 51%]
tests/unit/spec_tests/test_group_spec.py::TestNotAllowedConfig::test_no_name_no_def_no_inc PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::TestResolveAttrs::test_is_inherited_attribute PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::TestResolveAttrs::test_is_inherited_spec PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::TestResolveAttrs::test_is_overridden_attribute PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::TestResolveAttrs::test_is_overridden_spec PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::TestResolveAttrs::test_resolved PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::TestResolveGroupSameAttributeName::test_is_inherited_different_groups_and_datasets PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::TestResolveGroupSameAttributeName::test_is_inherited_two_different_datasets PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecWithLinksTest::test_constructor PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecWithLinksTest::test_extension_no_overwrite PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::GroupSpecWithLinksTest::test_extension_overwrite PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_named_unnamed_dataset_same_type PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_named_unnamed_dataset_with_def_same_type PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_named_unnamed_group_same_type PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_named_unnamed_group_with_def_same_type PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_named_unnamed_link_same_type PASSED [ 52%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_three_named_datasets_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_three_named_links_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_two_named_datasets_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_two_named_group_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_two_named_links_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_two_named_unnamed_dataset_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_two_named_unnamed_link_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_two_unnamed_datasets_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_two_unnamed_group_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_two_unnamed_links_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_unnamed_named_dataset_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_unnamed_named_group_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithDupsTest::test_unnamed_named_link_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithGroupsLinksTest::test_unnamed_dataset_link_same_type PASSED [ 53%]
tests/unit/spec_tests/test_group_spec.py::SpecWithGroupsLinksTest::test_unnamed_group_link_same_type PASSED [ 53%]
tests/unit/spec_tests/test_link_spec.py::LinkSpecTests::test_build_warn_extra_args PASSED [ 54%]
tests/unit/spec_tests/test_link_spec.py::LinkSpecTests::test_constructor PASSED [ 54%]
tests/unit/spec_tests/test_link_spec.py::LinkSpecTests::test_constructor_defaults PASSED [ 54%]
tests/unit/spec_tests/test_link_spec.py::LinkSpecTests::test_constructor_target_spec_def PASSED [ 54%]
tests/unit/spec_tests/test_link_spec.py::LinkSpecTests::test_constructor_target_spec_inc PASSED [ 54%]
tests/unit/spec_tests/test_link_spec.py::LinkSpecTests::test_required_is_many PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestSpecLoad::test_inherited_attributes PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestSpecLoad::test_inherited_attributes_not_resolved PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestSpecLoadEdgeCase::test_build_namespace_missing_version PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestSpecLoadEdgeCase::test_get_namespace_missing_version PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestSpecLoadEdgeCase::test_load_namespace_none_version PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestSpecLoadEdgeCase::test_load_namespace_unversioned_version PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestSpecLoadEdgeCase::test_missing_version_string PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestCatchDupNS::test_catch_dup_name PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestCatchDupNS::test_catch_dup_name_same_version PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestCustomSpecClasses::test_constructor_getters PASSED [ 54%]
tests/unit/spec_tests/test_load_namespace.py::TestCustomSpecClasses::test_load_namespaces PASSED [ 55%]
tests/unit/spec_tests/test_load_namespace.py::TestCustomSpecClasses::test_load_namespaces_bad_path PASSED [ 55%]
tests/unit/spec_tests/test_load_namespace.py::TestCustomSpecClasses::test_load_namespaces_ext PASSED [ 55%]
tests/unit/spec_tests/test_load_namespace.py::TestCustomSpecClasses::test_load_namespaces_twice PASSED [ 55%]
tests/unit/spec_tests/test_ref_spec.py::RefSpecTests::test_constructor PASSED [ 55%]
tests/unit/spec_tests/test_ref_spec.py::RefSpecTests::test_wrong_reference_type PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_catch_duplicate_spec_different PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_catch_duplicate_spec_different_source PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_catch_duplicate_spec_nested PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_copy_spec_catalog PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_deepcopy_spec_catalog PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_get_full_hierarchy PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_get_spec_source_file PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_hierarchy PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_register_spec PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_subtypes PASSED [ 55%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_subtypes_norecursion PASSED [ 56%]
tests/unit/spec_tests/test_spec_catalog.py::SpecCatalogTest::test_subtypes_unknown_type PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestNamespaceBuilder::test_export_namespace PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestNamespaceBuilder::test_get_source_description PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestNamespaceBuilder::test_get_source_files PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestNamespaceBuilder::test_missing_version PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestNamespaceBuilder::test_read_namespace PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestYAMLSpecWrite::test_get_name PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestYAMLSpecWrite::test_init PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestYAMLSpecWrite::test_write_namespace PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestExportSpec::test_export PASSED [ 56%]
tests/unit/spec_tests/test_spec_write.py::TestExportSpec::test_missing_data_types PASSED [ 56%]
tests/unit/test_container.py::TestHERDManager::test_link_and_get_resources PASSED [ 56%]
tests/unit/test_container.py::TestContainer::test_all_children PASSED    [ 56%]
tests/unit/test_container.py::TestContainer::test_colon_restriction PASSED [ 56%]
tests/unit/test_container.py::TestContainer::test_del_read_io PASSED     [ 57%]
tests/unit/test_container.py::TestContainer::test_generate_new_id_child PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_generate_new_id_parent PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_generate_new_id_parent_no_recurse PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_get_ancestors PASSED   [ 57%]
tests/unit/test_container.py::TestContainer::test_get_data_type PASSED   [ 57%]
tests/unit/test_container.py::TestContainer::test_get_read_io_on_parent PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_get_read_io_on_self PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_init PASSED            [ 57%]
tests/unit/test_container.py::TestContainer::test_new PASSED             [ 57%]
tests/unit/test_container.py::TestContainer::test_new_construct_mode PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_new_object_id_none PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_parent_set_link_warning PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_read_io_none PASSED    [ 57%]
tests/unit/test_container.py::TestContainer::test_read_io_setter PASSED  [ 57%]
tests/unit/test_container.py::TestContainer::test_reassign_container_source PASSED [ 57%]
tests/unit/test_container.py::TestContainer::test_remove_child PASSED    [ 58%]
tests/unit/test_container.py::TestContainer::test_remove_child_nonchild PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_remove_child_noncontainer PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_repr PASSED            [ 58%]
tests/unit/test_container.py::TestContainer::test_reset_parent PASSED    [ 58%]
tests/unit/test_container.py::TestContainer::test_reset_parent_no_parent PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_reset_parent_parent_noncontainer PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_set_modified_parent PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_set_parent PASSED      [ 58%]
tests/unit/test_container.py::TestContainer::test_set_parent_exists PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_set_parent_overwrite PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_set_parent_overwrite_proxy PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_slash_restriction PASSED [ 58%]
tests/unit/test_container.py::TestContainer::test_type_hierarchy PASSED  [ 58%]
tests/unit/test_container.py::TestHTMLRepr::test_repr_html_ PASSED       [ 58%]
tests/unit/test_container.py::TestHTMLRepr::test_repr_html_array PASSED  [ 58%]
tests/unit/test_container.py::TestHTMLRepr::test_repr_html_array_large_arrays_not_displayed PASSED [ 59%]
tests/unit/test_container.py::TestHTMLRepr::test_repr_html_hdf5_dataset PASSED [ 59%]
tests/unit/test_container.py::TestHTMLRepr::test_repr_html_hdmf_io PASSED [ 59%]
tests/unit/test_container.py::TestData::test_bool_false PASSED           [ 59%]
tests/unit/test_container.py::TestData::test_bool_true PASSED            [ 59%]
tests/unit/test_container.py::TestData::test_constructor_scalar PASSED   [ 59%]
tests/unit/test_container.py::TestData::test_shape_list PASSED           [ 59%]
tests/unit/test_container.py::TestData::test_shape_nparray PASSED        [ 59%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_bad_field_conf_key PASSED [ 59%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_bad_field_missing_name PASSED [ 59%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_bad_fields_type PASSED [ 59%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_empty_fields PASSED [ 59%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_inheritance PASSED [ 59%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_inheritance_override PASSED [ 59%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_mult_inheritance_base_container PASSED [ 59%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_mult_inheritance_base_mixin PASSED [ 60%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_named_fields PASSED [ 60%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_not_settable PASSED [ 60%]
tests/unit/test_container.py::TestAbstractContainerFieldsConf::test_with_doc PASSED [ 60%]
tests/unit/test_container.py::TestContainerFieldsConf::test_child PASSED [ 60%]
tests/unit/test_container.py::TestContainerFieldsConf::test_required_name PASSED [ 60%]
tests/unit/test_container.py::TestContainerFieldsConf::test_setter_set_modified PASSED [ 60%]
tests/unit/test_container.py::TestChangeFieldsName::test_fields PASSED   [ 60%]
tests/unit/test_container.py::TestChangeFieldsName::test_fields_inheritance PASSED [ 60%]
tests/unit/test_io_hdf5.py::TestHDF5Writer::test_dataset_shape PASSED    [ 60%]
tests/unit/test_io_hdf5.py::TestHDF5Writer::test_read_builder PASSED     [ 60%]
tests/unit/test_io_hdf5.py::TestHDF5Writer::test_write_attribute_reference_builder PASSED [ 60%]
tests/unit/test_io_hdf5.py::TestHDF5Writer::test_write_attribute_reference_container PASSED [ 60%]
tests/unit/test_io_hdf5.py::TestHDF5Writer::test_write_builder PASSED    [ 60%]
tests/unit/test_io_hdf5.py::TestHDF5Writer::test_write_context_manager PASSED [ 60%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test__chunked_iter_fill PASSED [ 60%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_chunk_shape_override_through_wrapper PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_copy_h5py_dataset_h5dataio_input PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_copy_h5py_dataset_input PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_dci_h5dataset PASSED  [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_dci_h5dataset_scalar PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_dci_h5dataset_sparse_matched PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_dci_h5dataset_sparse_unmatched PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_error_on_unsupported_compression_filter PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_h5dataio_array_conversion_datachunkiterator PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_h5dataio_array_conversion_list PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_h5dataio_array_conversion_numpy PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_link_h5py_dataset_h5dataio_input PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_link_h5py_dataset_input PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_list_fill_empty PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_list_fill_empty_no_dtype PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_pass_through_of_chunk_shape_generic_data_chunk_iterator PASSED [ 61%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_pass_through_of_maxshape_on_h5dataset PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_pass_through_of_recommended_chunks PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_read_scalar_compound PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_read_str PASSED       [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_value_error_on_incompatible_compression_opts PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_warning_on_linking_of_regular_array PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_warning_on_non_gzip_compression PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_warning_on_setting_io_options_on_h5dataset_input PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_TermSetWrapper SKIPPED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_data_chunk_iterator PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_data_chunk_iterator_with_compression PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_generic_data_chunk_iterator PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_generic_data_chunk_iterator_with_compression PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_iterable PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_iterable_multidimensional_array PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_iterable_multidimensional_array_compression PASSED [ 62%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_chunked PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_compound_datatype PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_compress_available_int_filters PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_compress_gzip PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_compress_lzf PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_compress_szip PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_disable_default_compress PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_enable_default_compress PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_list_fillvalue PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_lol_strings PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_scalar PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_scalar_compound PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_dataset_string PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_multi_dci_conc PASSED [ 63%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_multi_dci_oaat PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_table PASSED    [ 64%]
tests/unit/test_io_hdf5_h5tools.py::H5IOTest::test_write_table_nested PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestRoundTrip::test_roundtrip_TermSetWrapper_attribute SKIPPED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestRoundTrip::test_roundtrip_TermSetWrapper_dataset SKIPPED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestRoundTrip::test_roundtrip_basic PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestRoundTrip::test_roundtrip_empty_dataset PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestRoundTrip::test_roundtrip_empty_group PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestRoundTrip::test_roundtrip_pathlib_path PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestHDF5IO::test_constructor PASSED  [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestHDF5IO::test_delete_with_incomplete_construction_missing_file PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestHDF5IO::test_delete_with_incomplete_construction_missing_open_files PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestHDF5IO::test_path_or_file PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestHDF5IO::test_pathlib_path PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestHDF5IO::test_set_file_mismatch PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestCacheSpec::test_cache_spec PASSED [ 64%]
tests/unit/test_io_hdf5_h5tools.py::TestNoCacheSpec::test_no_cache_spec PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestHERDIO::test_io_read_herd PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestHERDIO::test_io_read_herd_file_warn PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestHERDIO::test_io_read_herd_value_warn PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestHERDIO::test_io_write_extend_herd SKIPPED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestMultiWrite::test_double_append_new_manager SKIPPED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestMultiWrite::test_double_append_same_manager SKIPPED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestMultiWrite::test_double_write_new_manager PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestMultiWrite::test_double_write_same_manager PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestMultiWrite::test_write_add_append_bucket PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestMultiWrite::test_write_add_append_double_write PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestMultiWrite::test_write_add_write PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOMultiFileTest::test_copy_file_with_external_links PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestCloseLinks::test_close_linked_files_auto PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestCloseLinks::test_close_linked_files_explicit PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestCloseLinks::test_close_linked_files_not_disruptive PASSED [ 65%]
tests/unit/test_io_hdf5_h5tools.py::TestCloseLinks::test_close_links_manually_and_close PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOInitNoFileTest::test_init_no_file_ok PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOInitNoFileTest::test_init_no_file_r PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOInitNoFileTest::test_init_no_file_rplus PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOInitFileExistsTest::test_init_file_exists_ok PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOInitFileExistsTest::test_init_wminus_file_exists PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOInitFileExistsTest::test_init_x_file_exists PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOReadNoDataTest::test_read_no_data_a PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOReadNoDataTest::test_read_no_data_r PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOReadNoDataTest::test_read_no_data_rplus PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOReadData::test_read_file_ok PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOReadData::test_read_file_w PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOReadBuilderClosed::test_read_closed PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOWriteNoFile::test_write_no_file_a_ok PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOWriteNoFile::test_write_no_file_w_ok PASSED [ 66%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOWriteNoFile::test_write_no_file_wminus_ok PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOWriteNoFile::test_write_no_file_x_ok PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOWriteFileExists::test_write_a PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOWriteFileExists::test_write_r PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOWriteFileExists::test_write_rplus PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::HDF5IOWriteFileExists::test_write_w PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::TestWritten::test_set_written_on_write PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::H5DataIOValid::test_link PASSED      [ 67%]
tests/unit/test_io_hdf5_h5tools.py::H5DataIOValid::test_read_valid PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::H5DataIOValid::test_valid PASSED     [ 67%]
tests/unit/test_io_hdf5_h5tools.py::TestReadLink::test_broken_link PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::TestReadLink::test_broken_linked_data PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::TestReadLink::test_link_to_link PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::TestReadLink::test_set_link_loc PASSED [ 67%]
tests/unit/test_io_hdf5_h5tools.py::TestBuildWriteLinkToLink::test_external_link_to_external_link PASSED [ 67%]
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tests/unit/test_io_hdf5_h5tools.py::TestLinkData::test_link_data_false PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLinkData::test_link_data_true PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_file_no_path PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_file_path_matched PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_file_path_mismatched PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_no_path_no_file PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_no_specloc PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_none_version PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_path PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_resolve_custom_deps PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_unversioned PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_with_dependencies PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestLoadNamespaces::test_load_namespaces_with_pathlib_path PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_different_versions PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_multiple_namespaces PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_no_specloc PASSED [ 68%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_none_and_other_version PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_none_version PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_unversioned PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_unversioned_and_other PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_with_file PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestGetNamespaces::test_get_namespaces_with_path PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_append_data PASSED  [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_append_dataset_of_references PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_append_dataset_of_references_compound PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_append_dataset_of_references_orphaned_target PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_append_external_link_copy_data PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_append_external_link_data PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_attr_reference PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_basic PASSED        [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_basic_container PASSED [ 69%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_cache_spec_false PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_cache_spec_true PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_container_part PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_container_unknown PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_export_cpd_dset_refs PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_export_dset_refs PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_export_io PASSED    [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_export_simple_link_data PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_export_simple_link_data_false PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_export_simple_with_container_link_data_false PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_external_link_dataset PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_external_link_group PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_external_link_group_rel_path PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_external_link_link PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_new_soft_link PASSED [ 70%]
tests/unit/test_io_hdf5_h5tools.py::TestExport::test_non_HDF5_src_link_data_true PASSED [ 70%]
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tests/unit/test_io_hdf5_h5tools.py::TestExport::test_pop_data PASSED     [ 71%]
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tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorTests::test_array_axis_index_out_of_bounds_mutilple_axis PASSED [ 84%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorTests::test_array_axis_index_out_of_bounds_single_axis PASSED [ 84%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorTests::test_array_dimensions_mismatch PASSED [ 84%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorTests::test_array_unequal_number_of_axes_for_comparison PASSED [ 84%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorTests::test_array_unequal_number_of_dimensions PASSED [ 84%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorTests::test_array_unequal_number_of_dimensions_check_multiple_axesy PASSED [ 84%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorTests::test_array_unequal_number_of_dimensions_check_one_axis_only PASSED [ 84%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorResultTests::test_default_message PASSED [ 85%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorResultTests::test_ensure_use_of_tuples_during_asignment PASSED [ 85%]
tests/unit/utils_test/test_core_ShapeValidator.py::ShapeValidatorResultTests::test_set_error_to_illegal_type PASSED [ 85%]
tests/unit/utils_test/test_data_utils.py::TestAppendData::test_append_exception PASSED [ 85%]
tests/unit/utils_test/test_data_utils.py::TestZarrAppendData::test_append_data_zarr PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_allow_none PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_allow_none_false PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_allow_none_no_default PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_allow_none_redundant PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_allow_positional_error PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_allow_positional_warn PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_bad_shape PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_bad_type PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_bool_string_type PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_bool_type PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_catch_dup_names PASSED [ 85%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2 PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_all_kw_syntax PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_default PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_default_sub PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_default_sub_missing_args PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_kw_syntax PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_kwsyntax_sub PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_kwsyntax_sub_missing_args PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_kwsyntax_sub_nonetype_arg PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_pos_syntax PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_kw_pos_syntax_missing_args PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_pos_as_kw PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add2_w_unicode PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add_kw PASSED [ 86%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add_missing_args PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_docval_add_sub PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_dup_kw PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_bad_type PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_bool_mixed PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_float PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_forbidden_values PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_int PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_none_type PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_single_allowed PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_str PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_str_default PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_str_none_default PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_enum_uint PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_extra_args_dup_kw PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_extra_args_pos_kw PASSED [ 87%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_extra_args_pos_kw_ok PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_extra_args_pos_only PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_extra_args_pos_only_ok PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_extra_kwarg PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_extra_kwargs_pos_kw PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_get_docval_all PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_get_docval_missing_arg PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_get_docval_missing_arg_of_many_ok PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_get_docval_missing_args PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_get_docval_none PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_get_docval_none_arg PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_get_docval_one_arg PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_get_docval_two_args PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_multi_shape PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_nested_return_types PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_only_kw_arg1_arg2 PASSED [ 88%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_only_kw_arg1_arg2_pos PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_only_kw_arg1_no_arg2 PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_only_kw_arg1_pos_no_arg2 PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_only_kw_arg2_no_arg1 PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_only_kw_no_args PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_uint_string_type PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_uint_type PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidator::test_unsupported_docval_term PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_shape_invalid_unpack PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_shape_invalid_unpack_default PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_shape_none_unpack PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_shape_none_unpack_default PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_shape_other_unpack PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_shape_other_unpack_default PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_shape_valid_unpack PASSED [ 89%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_shape_valid_unpack_default PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_type_arg PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestDocValidatorChain::test_type_arg_wrong_type PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_arg_not_found_many_args PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_arg_not_found_one_arg PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_last_arg_not_dict PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_many_args_get_all PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_many_args_get_some PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_many_args_reverse PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_many_args_unpack PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_one_arg_first PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_one_arg_second PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestGetargs::test_too_few_args PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_arg_not_found_many_args PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_arg_not_found_one_arg PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_last_arg_not_dict PASSED [ 90%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_many_args_pop_all PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_many_args_pop_some PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_many_args_reverse PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_many_args_unpack PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_one_arg_first PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_one_arg_second PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargs::test_too_few_args PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargsToDict::test_arg_not_found_one_arg PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargsToDict::test_many_args_pop_all PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargsToDict::test_many_args_pop_some PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargsToDict::test_one_arg_first PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestPopargsToDict::test_one_arg_second PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestMacro::test_macro PASSED       [ 91%]
tests/unit/utils_test/test_docval.py::TestStringType::test_check_type PASSED [ 91%]
tests/unit/utils_test/test_docval.py::TestStringType::test_docstring PASSED [ 91%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_add_basic PASSED [ 91%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_add_callable PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_add_value_missing_key PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_clear_callback PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_clear_nocallback PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_constructor PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_constructor_default PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_delitem_callback PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_delitem_nocallback PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_eqeq_no_key_attr PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_eqeq_no_key_attr_no_val PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_eqeq_no_val PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_eqeq_nonempty PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_eqeq_nonempty_key_attr_no_match PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_eqeq_nonempty_unknown_attr PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_eqeq_other_key PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_eqeq_unknown_val PASSED [ 92%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_nonempty_other_key PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_getitem_unknown_val PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_pop_callback PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_pop_nocallback PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_popitem_callback PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_popitem_nocallback PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_set_key_attr PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_setdefault_callback PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_setitem_callable PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_setitem_getitem_basic PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_setitem_value_duplicate_key PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_setitem_value_inconsistent_key PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_setitem_value_missing_key PASSED [ 93%]
tests/unit/utils_test/test_labelleddict.py::TestLabelledDict::test_update_callback PASSED [ 93%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_arbitrary_iterable_with_len PASSED [ 93%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_dataio PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_dci PASSED   [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_h5dataset PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_list PASSED  [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_nparray PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_other PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_set PASSED   [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_strict_no_data_load PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_string PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestGetDataShape::test_tuple PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestToUintArray::test_list_float PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestToUintArray::test_list_int PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestToUintArray::test_list_int_neg PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestToUintArray::test_ndarray_float PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestToUintArray::test_ndarray_int PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestToUintArray::test_ndarray_int_neg PASSED [ 94%]
tests/unit/utils_test/test_utils.py::TestToUintArray::test_ndarray_uint PASSED [ 95%]
tests/unit/validator_tests/test_errors.py::TestErrorEquality::test_equal_with_no_location PASSED [ 95%]
tests/unit/validator_tests/test_errors.py::TestErrorEquality::test_equal_with_overlapping_name_when_location_present PASSED [ 95%]
tests/unit/validator_tests/test_errors.py::TestErrorEquality::test_equality_with_same_field_values PASSED [ 95%]
tests/unit/validator_tests/test_errors.py::TestErrorEquality::test_not_equal_with_different_location PASSED [ 95%]
tests/unit/validator_tests/test_errors.py::TestErrorEquality::test_not_equal_with_different_name PASSED [ 95%]
tests/unit/validator_tests/test_errors.py::TestErrorEquality::test_not_equal_with_different_reason PASSED [ 95%]
tests/unit/validator_tests/test_errors.py::TestErrorEquality::test_not_equal_with_overlapping_name_when_no_location PASSED [ 95%]
tests/unit/validator_tests/test_errors.py::TestErrorEquality::test_self_equality PASSED [ 95%]
tests/unit/validator_tests/test_validate.py::TestEmptySpec::test_invalid_missing_req_type PASSED [ 95%]
tests/unit/validator_tests/test_validate.py::TestEmptySpec::test_valid PASSED [ 95%]
tests/unit/validator_tests/test_validate.py::TestBasicSpec::test_invalid_incorrect_type_get_validator PASSED [ 95%]
tests/unit/validator_tests/test_validate.py::TestBasicSpec::test_invalid_incorrect_type_validate PASSED [ 95%]
tests/unit/validator_tests/test_validate.py::TestBasicSpec::test_invalid_missing PASSED [ 95%]
tests/unit/validator_tests/test_validate.py::TestBasicSpec::test_valid PASSED [ 95%]
tests/unit/validator_tests/test_validate.py::TestDateTimeInSpec::test_invalid_cpd_isodatetime_array PASSED [ 95%]
tests/unit/validator_tests/test_validate.py::TestDateTimeInSpec::test_invalid_isodatetime PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestDateTimeInSpec::test_invalid_isodatetime_array PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestDateTimeInSpec::test_valid_isodatetime PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestNestedTypes::test_invalid_missing_named_req_group PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestNestedTypes::test_invalid_missing_unnamed_req_group PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestNestedTypes::test_invalid_wrong_name_req_type PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestNestedTypes::test_valid PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestNestedTypes::test_valid_wo_opt_attr PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_incorrect_fixed_quantity_should_return_incorrect_quantity_error PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_incorrect_quantity_error_message PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_incorrect_zero_or_one_quantity_should_return_incorrect_quantity_error PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_missing_fixed_quantity_should_not_return_incorrect_quantity_error PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_missing_one_or_many_should_not_return_incorrect_quantity_error PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_valid_fixed_quantity PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_valid_one_or_many PASSED [ 96%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_valid_zero_or_many PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestQuantityValidation::test_valid_zero_or_one PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestDtypeValidation::test_ascii_for_utf8 PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestDtypeValidation::test_bool_for_numeric PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestDtypeValidation::test_int64_for_int8 PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestDtypeValidation::test_int64_for_numeric PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestDtypeValidation::test_int8_for_int64 PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestDtypeValidation::test_np_bool_for_bool PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestDtypeValidation::test_scalar_compound_dtype PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestDtypeValidation::test_utf8_for_ascii PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestReferenceValidation::test_invalid_reference PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::Test1DArrayValidation::test_empty_list PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::Test1DArrayValidation::test_empty_nparray PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::Test1DArrayValidation::test_scalar PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestStringDatetime::test_str_coincidental_isodatetime PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_should_not_validate_illegally_linked_objects PASSED [ 97%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_typed_linkable_dataset_accepts_link PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_typed_linkable_group_accepts_link PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_typed_nonlinkable_dataset_does_not_accept_link PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_typed_nonlinkable_group_does_not_accept_link PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_untyped_linkable_dataset_accepts_link PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_untyped_linkable_group_accepts_link PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_untyped_nonlinkable_dataset_does_not_accept_link PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkable::test_untyped_nonlinkable_group_does_not_accept_link PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestMultipleNamedChildrenOfSameType::test_missing_first_dataset_should_return_error PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestMultipleNamedChildrenOfSameType::test_missing_first_group_should_return_error PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestMultipleNamedChildrenOfSameType::test_missing_last_dataset_should_return_error PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestMultipleNamedChildrenOfSameType::test_missing_last_group_should_return_error PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestMultipleNamedChildrenOfSameType::test_no_errors_when_all_children_satisfied PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkAndChildMatchingDataType::test_error_on_missing_child_dataset PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkAndChildMatchingDataType::test_error_on_missing_group PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkAndChildMatchingDataType::test_error_on_missing_linked_dataset PASSED [ 98%]
tests/unit/validator_tests/test_validate.py::TestLinkAndChildMatchingDataType::test_error_on_missing_linked_group PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestMultipleChildrenAtDifferentLevelsOfInheritance::test_both_levels_of_hierarchy_validated PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestMultipleChildrenAtDifferentLevelsOfInheritance::test_both_levels_of_hierarchy_validated_inverted_order SKIPPED [ 99%]
tests/unit/validator_tests/test_validate.py::TestMultipleChildrenAtDifferentLevelsOfInheritance::test_error_returned_when_child_at_highest_level_missing PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestMultipleChildrenAtDifferentLevelsOfInheritance::test_error_returned_when_child_at_lowest_level_missing PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestExtendedIncDataTypes::test_missing_additional_attribute_on_anonymous_data_type_extension PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestExtendedIncDataTypes::test_redundant_attribute_in_spec PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestExtendedIncDataTypes::test_validate_child_type_against_anonymous_data_type_extension PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestReferenceDatasetsRoundTrip::test_round_trip_validation_of_compound_dtype_with_reference PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestReferenceDatasetsRoundTrip::test_round_trip_validation_of_reference_dataset_array PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestEmptyDataRoundTrip::test_empty_int_attribute PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestEmptyDataRoundTrip::test_empty_int_dataset PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestEmptyDataRoundTrip::test_empty_string_attribute PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestEmptyDataRoundTrip::test_empty_string_dataset PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestValidateSubspec::test_validate_subtype PASSED [ 99%]
tests/unit/validator_tests/test_validate.py::TestValidateSubspec::test_validate_subtype_error PASSED [100%]
=============================== warnings summary ===============================
tests/unit/common/test_resources.py: 61 warnings
tests/unit/test_container.py: 1 warning
tests/unit/test_io_hdf5_h5tools.py: 4 warnings
  /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/container.py:290: UserWarning: HERD is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
    warn(_exp_warn_msg(cls))
tests/unit/common/test_table.py: 20 warnings
  /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/lib/python3.13/site-packages/hdmf/container.py:290: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
    warn(_exp_warn_msg(cls))
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
SKIPPED [1] tests/unit/build_tests/mapper_tests/test_build.py:29: optional LinkML module is not installed
SKIPPED [1] tests/unit/build_tests/test_io_map.py:530: Create dataset differently for h5py < 3
SKIPPED [1] tests/unit/build_tests/test_io_map.py:561: Create dataset differently for h5py < 3
SKIPPED [1] tests/unit/common/test_resources.py:330: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:307: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:353: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:392: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:435: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:376: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:413: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:482: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:459: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_resources.py:287: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_sparse.py:16: scipy is installed
SKIPPED [1] tests/unit/common/test_table.py:133: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:152: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:262: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:276: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:290: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:304: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:167: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:206: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:189: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:235: optional LinkML module is not installed
SKIPPED [1] tests/unit/common/test_table.py:1263: we no longer check data contents for performance reasons
SKIPPED [1] tests/unit/common/test_table.py:2021: feature is not yet supported
SKIPPED [1] tests/unit/test_io_hdf5_h5tools.py:160: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_io_hdf5_h5tools.py:898: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_io_hdf5_h5tools.py:879: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_io_hdf5_h5tools.py:1126: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_io_hdf5_h5tools.py:1206: Functionality not yet supported
SKIPPED [1] tests/unit/test_io_hdf5_h5tools.py:1220: Functionality not yet supported
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:91: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:103: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:97: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:111: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:123: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:117: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:129: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:141: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_io_hdf5_streaming.py:135: Internet access to DANDI failed. Skipping all Ros3 streaming tests.
SKIPPED [1] tests/unit/test_term_set.py:105: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:125: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:139: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:78: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:87: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:55: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:41: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:48: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:35: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:92: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:30: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:70: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:74: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:63: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:97: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:175: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:169: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:178: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:203: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:208: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:213: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:218: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:185: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:194: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:258: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:235: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:240: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:252: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:246: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:231: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:264: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:336: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:330: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:343: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:309: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:324: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:349: optional LinkML module is not installed
SKIPPED [1] tests/unit/test_term_set.py:320: optional LinkML module is not installed
SKIPPED [1] tests/unit/utils_test/test_core_GenericDataChunkIterator.py:443: optional tqdm module is not installed
SKIPPED [1] tests/unit/validator_tests/test_validate.py:975: Functionality not yet supported
========== 1488 passed, 81 skipped, 1 xfailed, 86 warnings in 19.10s ===========
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: python3-hdmf-4.0.0-1.fc43.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.v5LaZj
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ cd hdmf-4.0.0
+ DOCDIR=/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/share/doc/python3-hdmf
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/share/doc/python3-hdmf
+ cp -pr /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/README.rst /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/share/doc/python3-hdmf
+ cp -pr /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/Legal.txt /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/share/doc/python3-hdmf
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Jbp1ko
+ umask 022
+ cd /builddir/build/BUILD/python-hdmf-4.0.0-build
+ cd hdmf-4.0.0
+ LICENSEDIR=/builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/share/licenses/python3-hdmf
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/share/licenses/python3-hdmf
+ cp -pr /builddir/build/BUILD/python-hdmf-4.0.0-build/hdmf-4.0.0/license.txt /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT/usr/share/licenses/python3-hdmf
+ RPM_EC=0
++ jobs -p
+ exit 0
warning: absolute symlink: /usr/lib/python3.13/site-packages/hdmf/common/hdmf-common-schema -> /usr/share/hdmf-common-schema/
Provides: python-hdmf = 4.0.0-1.fc43 python3-hdmf = 4.0.0-1.fc43 python3.13-hdmf = 4.0.0-1.fc43 python3.13dist(hdmf) = 4 python3dist(hdmf) = 4
Requires(rpmlib): rpmlib(BuiltinLuaScripts) <= 4.2.2-1 rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/python3 python(abi) = 3.13 python3.13dist(h5py) >= 3.1 python3.13dist(jsonschema) >= 3.2 python3.13dist(numpy) >= 1.19.3 python3.13dist(pandas) >= 1.2 python3.13dist(ruamel-yaml) >= 0.16
Processing files: python3-hdmf+tqdm-4.0.0-1.fc43.noarch
Provides: python-hdmf+tqdm = 4.0.0-1.fc43 python3-hdmf+tqdm = 4.0.0-1.fc43 python3.13-hdmf+tqdm = 4.0.0-1.fc43 python3.13dist(hdmf[tqdm]) = 4 python3dist(hdmf[tqdm]) = 4
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.13 python3.13dist(tqdm) >= 4.41
Processing files: python3-hdmf+zarr-4.0.0-1.fc43.noarch
Provides: python-hdmf+zarr = 4.0.0-1.fc43 python3-hdmf+zarr = 4.0.0-1.fc43 python3.13-hdmf+zarr = 4.0.0-1.fc43 python3.13dist(hdmf[zarr]) = 4 python3dist(hdmf[zarr]) = 4
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: (python3.13dist(zarr) < 3~~ with python3.13dist(zarr) >= 2.12) python(abi) = 3.13
Processing files: python3-hdmf+sparse-4.0.0-1.fc43.noarch
Provides: python-hdmf+sparse = 4.0.0-1.fc43 python3-hdmf+sparse = 4.0.0-1.fc43 python3.13-hdmf+sparse = 4.0.0-1.fc43 python3.13dist(hdmf[sparse]) = 4 python3dist(hdmf[sparse]) = 4
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.13 python3.13dist(scipy) >= 1.7
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-hdmf-4.0.0-build/BUILDROOT
Wrote: /builddir/build/SRPMS/python-hdmf-4.0.0-1.fc43.src.rpm
Wrote: /builddir/build/RPMS/python3-hdmf+zarr-4.0.0-1.fc43.noarch.rpm
Wrote: /builddir/build/RPMS/python3-hdmf+tqdm-4.0.0-1.fc43.noarch.rpm
Wrote: /builddir/build/RPMS/python3-hdmf+sparse-4.0.0-1.fc43.noarch.rpm
Wrote: /builddir/build/RPMS/python3-hdmf-4.0.0-1.fc43.noarch.rpm
RPM build warnings:
    absolute symlink: /usr/lib/python3.13/site-packages/hdmf/common/hdmf-common-schema -> /usr/share/hdmf-common-schema/
Child return code was: 0