Mock Version: 5.6 Mock Version: 5.6 Mock Version: 5.6 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pybbi.spec'], chrootPath='/var/lib/mock/f41-build-52001526-6225215/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'e80823e77c15491985c88f2b1b60cea9', '-D', '/var/lib/mock/f41-build-52001526-6225215/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pybbi.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1718668800 Wrote: /builddir/build/SRPMS/python-pybbi-0.4.0-2.fc41.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pybbi.spec'], chrootPath='/var/lib/mock/f41-build-52001526-6225215/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'e61d7652248b4ba69b4e61d878e5885d', '-D', '/var/lib/mock/f41-build-52001526-6225215/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pybbi.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1718668800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.VxQux9 + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + test -d /builddir/build/BUILD/python-pybbi-0.4.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-pybbi-0.4.0-build + /usr/bin/rm -rf /builddir/build/BUILD/python-pybbi-0.4.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-pybbi-0.4.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-pybbi-0.4.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.dIWmtB + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + rm -rf pybbi-0.4.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/pybbi-0.4.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd pybbi-0.4.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i s/oldest-supported-numpy/numpy/ pyproject.toml + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.6CZJiK + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + cd pybbi-0.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir --output /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-buildrequires -x test -w Handling Cython >=0.29; python_version<'3.8' from build-system.requires Ignoring alien requirement: Cython >=0.29; python_version<'3.8' Handling Cython >=0.29.14; python_version=='3.8' from build-system.requires Ignoring alien requirement: Cython >=0.29.14; python_version=='3.8' Handling Cython >=0.29.15; python_version>='3.9' from build-system.requires Requirement not satisfied: Cython >=0.29.15; python_version>='3.9' Handling numpy from build-system.requires Requirement not satisfied: numpy Handling pkgconfig from build-system.requires Requirement not satisfied: pkgconfig Handling setuptools from build-system.requires Requirement not satisfied: setuptools Handling wheel from build-system.requires Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pybbi-0.4.0-2.fc41.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pybbi.spec'], chrootPath='/var/lib/mock/f41-build-52001526-6225215/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'c2a0fe6fb51e47a299da2086e8ae6795', '-D', '/var/lib/mock/f41-build-52001526-6225215/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pybbi.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1718668800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.s94HvA + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + cd pybbi-0.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir --output /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-buildrequires -x test -w Handling Cython >=0.29; python_version<'3.8' from build-system.requires Ignoring alien requirement: Cython >=0.29; python_version<'3.8' Handling Cython >=0.29.14; python_version=='3.8' from build-system.requires Ignoring alien requirement: Cython >=0.29.14; python_version=='3.8' Handling Cython >=0.29.15; python_version>='3.9' from build-system.requires Requirement satisfied: Cython >=0.29.15; python_version>='3.9' (installed: Cython 3.0.9) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 1.26.4) Handling pkgconfig from build-system.requires Requirement satisfied: pkgconfig (installed: pkgconfig 1.5.5) Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 69.2.0) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.43.0) cd src && make clean make[1]: Entering directory '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src' rm -f aliType.o annoAssembly.o annoFilter.o annoFormatter.o annoFormatTab.o annoGrator.o annoGrateWig.o annoGratorQuery.o annoOption.o annoRow.o annoStreamer.o annoStreamBigBed.o annoStreamBigWig.o annoStreamTab.o annoStreamVcf.o apacheLog.o asParse.o axt.o axtAffine.o bamFile.o base64.o basicBed.o bbiRead.o bbiWrite.o bedTabix.o bigBed.o binRange.o bits.o blastOut.o blastParse.o boxClump.o boxLump.o bPlusTree.o bwgCreate.o bwgQuery.o bwgValsOnChrom.o cda.o chain.o chainBlock.o chainConnect.o chainToAxt.o chainToPsl.o cheapcgi.o cirTree.o codebias.o colHash.o common.o correlate.o crTree.o dgRange.o diGraph.o dlist.o dnaLoad.o dnaMarkov.o dnaMotif.o dnaseq.o dnautil.o dtdParse.o dyOut.o dystring.o elmTree.o emblParse.o errCatch.o errAbort.o fa.o ffAli.o ffScore.o fieldedTable.o filePath.o fixColor.o flydna.o fof.o font/mgCourier10.o font/mgCourier12.o font/mgCourier14.o font/mgCourier18.o font/mgCourier24.o font/mgCourier34.o font/mgCourier8.o font/mgHelvetica10.o font/mgHelvetica12.o font/mgHelvetica14.o font/mgHelvetica18.o font/mgHelvetica24.o font/mgHelvetica34.o font/mgHelvetica8.o font/mgHelveticaBold10.o font/mgHelveticaBold12.o font/mgHelveticaBold14.o font/mgHelveticaBold18.o font/mgHelveticaBold24.o font/mgHelveticaBold34.o font/mgHelveticaBold8.o font/mgSixhi6.o font/mgSail8.o font/mgTimes10.o font/mgTimes12.o font/mgTimes14.o font/mgTimes18.o font/mgTimes24.o font/mgTimes34.o font/mgTimes8.o font/mgMenlo12.o fq.o fuzzyShow.o gapCalc.o gdf.o gemfont.o genomeRangeTree.o gfNet.o gff.o gff3.o gfxPoly.o gifLabel.o hacTree.o hash.o hex.o histogram.o hmmPfamParse.o hmmstats.o htmlPage.o htmshell.o hmac.o https.o intExp.o intValTree.o internet.o itsa.o iupac.o jointalign.o jpegSize.o jsonParse.o jsonWrite.o keys.o knetUdc.o kxTok.o linefile.o lineFileOnBigBed.o localmem.o log.o longToList.o maf.o mafFromAxt.o mafScore.o mailViaPipe.o md5.o memalloc.o memgfx.o meta.o metaWig.o mgCircle.o mgPolygon.o mime.o net.o nib.o nibTwo.o nt4.o numObscure.o obscure.o oldGff.o oligoTm.o options.o osunix.o pairHmm.o pairDistance.o paraFetch.o peakCluster.o phyloTree.o pipeline.o portimpl.o pngwrite.o psGfx.o psPoly.o pscmGfx.o psl.o pslGenoShow.o pslShow.o pslTbl.o pslTransMap.o pthreadDoList.o pthreadWrap.o qa.o quickHeap.o quotedP.o ra.o rainbow.o raToStruct.o rbTree.o rangeTree.o regexHelper.o repMask.o rle.o rnautil.o rqlEval.o rqlParse.o rudp.o scoreWindow.o seg.o seqOut.o seqStats.o servBrcMcw.o servCrunx.o servcis.o servcl.o servmsII.o servpws.o shaRes.o slog.o snof.o snofmake.o snofsig.o spaceSaver.o spacedColumn.o spacedSeed.o splatAli.o sqlList.o sqlNum.o subText.o sufa.o sufx.o synQueue.o tabRow.o tagStorm.o textOut.o tokenizer.o trix.o twoBit.o udc.o vcf.o vcfBits.o vGfx.o vPng.o verbose.o wildcmp.o wormdna.o xAli.o xa.o xap.o xenshow.o xmlEscape.o xp.o zlibFace.o x86_64/libkent.a cd tests && make clean make[2]: Entering directory '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/tests' rm -rf *.o bin output *.tmp mimeTester.tmp mimeTester.out fetchUrlTest make[2]: Leaving directory '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/tests' make[1]: Leaving directory '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src' cd src && make make[1]: Entering directory '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src' gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o aliType.o -c aliType.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoAssembly.o -c annoAssembly.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoFilter.o -c annoFilter.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoFormatter.o -c annoFormatter.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoFormatTab.o -c annoFormatTab.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoGrator.o -c annoGrator.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoGrateWig.o -c annoGrateWig.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoGratorQuery.o -c annoGratorQuery.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoOption.o -c annoOption.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoRow.o -c annoRow.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoStreamer.o -c annoStreamer.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoStreamBigBed.o -c annoStreamBigBed.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoStreamBigWig.o -c annoStreamBigWig.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoStreamTab.o -c annoStreamTab.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o annoStreamVcf.o -c annoStreamVcf.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o apacheLog.o -c apacheLog.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o asParse.o -c asParse.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o axt.o -c axt.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o axtAffine.o -c axtAffine.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bamFile.o -c bamFile.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o base64.o -c base64.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o basicBed.o -c basicBed.c basicBed.c: In function ‘bedParseRgb’: basicBed.c:1035:1: warning: ‘strncpy’ specified bound 64 equals destination size [-Wstringop-truncation] 1035 | strncpy(dupe, itemRgb, sizeof(dupe)); | ^ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bbiRead.o -c bbiRead.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bbiWrite.o -c bbiWrite.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bedTabix.o -c bedTabix.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bigBed.o -c bigBed.c bigBed.c: In function ‘extractField’: bigBed.c:314:52: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 314 | warn("Not enough fields in extractField of %s", line); | ^~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o binRange.o -c binRange.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bits.o -c bits.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o blastOut.o -c blastOut.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o blastParse.o -c blastParse.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o boxClump.o -c boxClump.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o boxLump.o -c boxLump.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bPlusTree.o -c bPlusTree.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bwgCreate.o -c bwgCreate.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bwgQuery.o -c bwgQuery.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o bwgValsOnChrom.o -c bwgValsOnChrom.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o cda.o -c cda.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o chain.o -c chain.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o chainBlock.o -c chainBlock.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o chainConnect.o -c chainConnect.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o chainToAxt.o -c chainToAxt.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o chainToPsl.o -c chainToPsl.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o cheapcgi.o -c cheapcgi.c cheapcgi.c: In function ‘catchSignal’: cheapcgi.c:823:38: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 823 | fprintf(stderr, "Received signal %s\n", sig); | ^~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o cirTree.o -c cirTree.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o codebias.o -c codebias.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o colHash.o -c colHash.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o common.o -c common.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o correlate.o -c correlate.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o crTree.o -c crTree.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dgRange.o -c dgRange.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o diGraph.o -c diGraph.c In file included from diGraph.c:5: In function ‘slAddHead’, inlined from ‘dgSwapEdges’ at diGraph.c:705:5: /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include/common.h:373:9: warning: ‘con1’ may be used uninitialized [-Wmaybe-uninitialized] 373 | n->next = *ppt; | ~~~~~~~~^~~~~~ diGraph.c: In function ‘dgSwapEdges’: diGraph.c:691:22: note: ‘con1’ was declared here 691 | struct dgConnection *con1, *con2; | ^~~~ In function ‘slAddHead’, inlined from ‘dgSwapEdges’ at diGraph.c:707:5: /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include/common.h:373:9: warning: ‘con2’ may be used uninitialized [-Wmaybe-uninitialized] 373 | n->next = *ppt; | ~~~~~~~~^~~~~~ diGraph.c: In function ‘dgSwapEdges’: diGraph.c:691:29: note: ‘con2’ was declared here 691 | struct dgConnection *con1, *con2; | ^~~~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dlist.o -c dlist.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dnaLoad.o -c dnaLoad.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dnaMarkov.o -c dnaMarkov.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dnaMotif.o -c dnaMotif.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dnaseq.o -c dnaseq.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dnautil.o -c dnautil.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dtdParse.o -c dtdParse.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dyOut.o -c dyOut.c dyOut.c: In function ‘dyOutPrintDirectly’: dyOut.c:100:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 100 | if (len != 0) | ^~ dyOut.c:102:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 102 | fflush(file); | ^~~~~~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o dystring.o -c dystring.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o elmTree.o -c elmTree.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o emblParse.o -c emblParse.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o errCatch.o -c errCatch.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o errAbort.o -c errAbort.c errAbort.c: In function ‘getThreadVars’: errAbort.c:345:5: warning: ignoring return value of ‘write’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 345 | write(STDERR_FILENO, errMsg, strlen(errMsg)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o fa.o -c fa.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs 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-L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o fieldedTable.o -c fieldedTable.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o filePath.o -c filePath.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o fixColor.o -c fixColor.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o flydna.o -c flydna.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o fof.o -c fof.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o font/mgCourier10.o -c font/mgCourier10.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o font/mgCourier12.o -c font/mgCourier12.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o font/mgCourier14.o -c font/mgCourier14.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o font/mgCourier18.o -c font/mgCourier18.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o font/mgCourier24.o -c font/mgCourier24.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o font/mgCourier34.o -c font/mgCourier34.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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-mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o htmlPage.o -c htmlPage.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o htmshell.o -c htmshell.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o hmac.o -c hmac.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o https.o -c https.c https.c: In function ‘openSslInit’: https.c:78:5: warning: ‘ERR_load_SSL_strings’ is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations] 78 | ERR_load_SSL_strings(); | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/openssl/sslerr.h:17, from /usr/include/openssl/ssl.h:44, from https.c:8: /usr/include/openssl/sslerr_legacy.h:29:27: note: declared here 29 | OSSL_DEPRECATEDIN_3_0 int ERR_load_SSL_strings(void); | ^~~~~~~~~~~~~~~~~~~~ https.c: At top level: https.c:29:13: warning: ‘openssl_locking_callback’ defined but not used [-Wunused-function] 29 | static void openssl_locking_callback(int mode, int n, const char * file, int line) | ^~~~~~~~~~~~~~~~~~~~~~~~ https.c:24:22: warning: ‘openssl_id_callback’ defined but not used [-Wunused-function] 24 | static unsigned long openssl_id_callback(void) | ^~~~~~~~~~~~~~~~~~~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o intExp.o -c intExp.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o intValTree.o -c intValTree.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o internet.o -c internet.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o itsa.o -c itsa.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o iupac.o -c iupac.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o jointalign.o -c jointalign.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o jpegSize.o -c jpegSize.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o jsonParse.o -c jsonParse.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o jsonWrite.o -c jsonWrite.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o keys.o -c keys.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o knetUdc.o -c knetUdc.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o kxTok.o -c kxTok.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o linefile.o -c linefile.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o lineFileOnBigBed.o -c lineFileOnBigBed.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o localmem.o -c localmem.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o log.o -c log.c log.c: In function ‘logDaemonize’: log.c:344:5: warning: ignoring return value of ‘dup’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 344 | dup(nullFd); // Stdout goes also to /dev/null | ^~~~~~~~~~~ log.c:345:5: warning: ignoring return value of ‘dup’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 345 | dup(nullFd); // Stderr goes also to /dev/null | ^~~~~~~~~~~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o longToList.o -c longToList.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o maf.o -c maf.c maf.c: In function ‘mafFlipStrand’: maf.c:749:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 749 | if (mc->text != NULL) | ^~ maf.c:751:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 751 | if (mc->quality != NULL) | ^~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o mafFromAxt.o -c mafFromAxt.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o mafScore.o -c mafScore.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o mailViaPipe.o -c mailViaPipe.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o md5.o -c md5.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o memalloc.o -c memalloc.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o memgfx.o -c memgfx.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o meta.o -c meta.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o metaWig.o -c metaWig.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o mgCircle.o -c mgCircle.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o mgPolygon.o -c mgPolygon.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o mime.o -c mime.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o net.o -c net.c net.c: In function ‘netConnectWithTimeout’: net.c:144:38: warning: passing argument 3 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict] 144 | res = select(sd+1, NULL, &mySet, &mySet, &tempTime); | ^~~~~~ ~~~~~~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o nib.o -c nib.c nib.c: In function ‘nibInput’: nib.c:225:22: warning: array subscript [-134217728, -1] is outside array bounds of ‘DNA[]’ [-Warray-bounds=] 225 | *d++ = valToNtTbl[(bVal>>4)]; | ~~~~~~~~~~^~~~~~~~~~~ In file included from nib.c:8: /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include/dnautil.h:71:12: note: at offset [-134217728, -1] into object ‘valToNtMasked’ of size 256 71 | extern DNA valToNtMasked[256]; | ^~~~~~~~~~~~~ /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include/dnautil.h:57:12: note: at offset [-134217728, -1] into object ‘valToNt’ of size [0, 9223372036854775807] 57 | extern DNA valToNt[]; | ^~~~~~~ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o nibTwo.o -c nibTwo.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o nt4.o -c nt4.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o numObscure.o -c numObscure.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o obscure.o -c obscure.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o oldGff.o -c oldGff.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o oligoTm.o -c oligoTm.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o options.o -c options.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o osunix.o -c osunix.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o wildcmp.o -c wildcmp.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o wormdna.o -c wormdna.c wormdna.c: In function ‘wormIsGeneName’: wormdna.c:524:1: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 524 | strncpy(buf, name, sizeof(buf)); | ^ wormdna.c: In function ‘wormParseChromRange’: wormdna.c:880:1: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 880 | strncpy(buf, in, sizeof(buf)); | ^ gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o xAli.o -c xAli.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o xa.o -c xa.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o xap.o -c xap.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o xenshow.o -c xenshow.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o xmlEscape.o -c xmlEscape.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o xp.o -c xp.c gcc -g -pthread -fPIC -static -Wall -DWITH_GZFILEOP -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -DUSE_SSL -L/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src/x86_64 -lssl -lcrypto -lz -ldl -pthread -lpng16 -lm -lm -lz -lcrypto -lz -ldl -pthread -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -I/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/include -I/usr/include/libpng16 -o zlibFace.o -c zlibFace.c ar rcus x86_64/libkent.a aliType.o annoAssembly.o annoFilter.o annoFormatter.o annoFormatTab.o annoGrator.o annoGrateWig.o annoGratorQuery.o annoOption.o annoRow.o annoStreamer.o annoStreamBigBed.o annoStreamBigWig.o annoStreamTab.o annoStreamVcf.o apacheLog.o asParse.o axt.o axtAffine.o bamFile.o base64.o basicBed.o bbiRead.o bbiWrite.o bedTabix.o bigBed.o binRange.o bits.o blastOut.o blastParse.o boxClump.o boxLump.o bPlusTree.o bwgCreate.o bwgQuery.o bwgValsOnChrom.o cda.o chain.o chainBlock.o chainConnect.o chainToAxt.o chainToPsl.o cheapcgi.o cirTree.o codebias.o colHash.o common.o correlate.o crTree.o dgRange.o diGraph.o dlist.o dnaLoad.o dnaMarkov.o dnaMotif.o dnaseq.o dnautil.o dtdParse.o dyOut.o dystring.o elmTree.o emblParse.o errCatch.o errAbort.o fa.o ffAli.o ffScore.o fieldedTable.o filePath.o fixColor.o flydna.o fof.o font/mgCourier10.o font/mgCourier12.o font/mgCourier14.o font/mgCourier18.o font/mgCourier24.o font/mgCourier34.o font/mgCourier8.o font/mgHelvetica10.o font/mgHelvetica12.o font/mgHelvetica14.o font/mgHelvetica18.o font/mgHelvetica24.o font/mgHelvetica34.o font/mgHelvetica8.o font/mgHelveticaBold10.o font/mgHelveticaBold12.o font/mgHelveticaBold14.o font/mgHelveticaBold18.o font/mgHelveticaBold24.o font/mgHelveticaBold34.o font/mgHelveticaBold8.o font/mgSixhi6.o font/mgSail8.o font/mgTimes10.o font/mgTimes12.o font/mgTimes14.o font/mgTimes18.o font/mgTimes24.o font/mgTimes34.o font/mgTimes8.o font/mgMenlo12.o fq.o fuzzyShow.o gapCalc.o gdf.o gemfont.o genomeRangeTree.o gfNet.o gff.o gff3.o gfxPoly.o gifLabel.o hacTree.o hash.o hex.o histogram.o hmmPfamParse.o hmmstats.o htmlPage.o htmshell.o hmac.o https.o intExp.o intValTree.o internet.o itsa.o iupac.o jointalign.o jpegSize.o jsonParse.o jsonWrite.o keys.o knetUdc.o kxTok.o linefile.o lineFileOnBigBed.o localmem.o log.o longToList.o maf.o mafFromAxt.o mafScore.o mailViaPipe.o md5.o memalloc.o memgfx.o meta.o metaWig.o mgCircle.o mgPolygon.o mime.o net.o nib.o nibTwo.o nt4.o numObscure.o obscure.o oldGff.o oligoTm.o options.o osunix.o pairHmm.o pairDistance.o paraFetch.o peakCluster.o phyloTree.o pipeline.o portimpl.o pngwrite.o psGfx.o psPoly.o pscmGfx.o psl.o pslGenoShow.o pslShow.o pslTbl.o pslTransMap.o pthreadDoList.o pthreadWrap.o qa.o quickHeap.o quotedP.o ra.o rainbow.o raToStruct.o rbTree.o rangeTree.o regexHelper.o repMask.o rle.o rnautil.o rqlEval.o rqlParse.o rudp.o scoreWindow.o seg.o seqOut.o seqStats.o servBrcMcw.o servCrunx.o servcis.o servcl.o servmsII.o servpws.o shaRes.o slog.o snof.o snofmake.o snofsig.o spaceSaver.o spacedColumn.o spacedSeed.o splatAli.o sqlList.o sqlNum.o subText.o sufa.o sufx.o synQueue.o tabRow.o tagStorm.o textOut.o tokenizer.o trix.o twoBit.o udc.o vcf.o vcfBits.o vGfx.o vPng.o verbose.o wildcmp.o wormdna.o xAli.o xa.o xap.o xenshow.o xmlEscape.o xp.o zlibFace.o make[1]: Leaving directory '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/src' /usr/lib64/python3.13/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/bbi/cbbi.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: bbi/cbbi.pyx:959:4: Buffer unpacking not optimized away. warning: bbi/cbbi.pyx:959:4: Buffer unpacking not optimized away. warning: bbi/cbbi.pyx:1013:4: Buffer unpacking not optimized away. warning: bbi/cbbi.pyx:1013:4: Buffer unpacking not optimized away. Compiling bbi/cbbi.pyx because it changed. [1/1] Cythonizing bbi/cbbi.pyx /usr/lib/python3.13/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'build_ext' warnings.warn(msg) running egg_info creating pybbi.egg-info writing pybbi.egg-info/PKG-INFO writing dependency_links to pybbi.egg-info/dependency_links.txt writing requirements to pybbi.egg-info/requires.txt writing top-level names to pybbi.egg-info/top_level.txt writing manifest file 'pybbi.egg-info/SOURCES.txt' dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'pybbi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'venv' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'pybbi.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) Handling pip >= 19 from %pyproject_buildrequires -w Requirement satisfied: pip >= 19 (installed: pip 24.1.1) Processing /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) /usr/lib/python3.13/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'build_ext' warnings.warn(msg) running dist_info creating /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi.egg-info writing /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi.egg-info/SOURCES.txt' dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'venv' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-modern-metadata-60pxyjm2/pybbi-0.4.0.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: pybbi Building wheel for pybbi (pyproject.toml): started Running command Building wheel for pybbi (pyproject.toml) /usr/lib/python3.13/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'build_ext' warnings.warn(msg) running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-cpython-313 creating build/lib.linux-x86_64-cpython-313/bbi copying bbi/__init__.py -> build/lib.linux-x86_64-cpython-313/bbi copying bbi/_bbi.py -> build/lib.linux-x86_64-cpython-313/bbi running egg_info writing pybbi.egg-info/PKG-INFO writing dependency_links to pybbi.egg-info/dependency_links.txt writing requirements to pybbi.egg-info/requires.txt writing top-level names to pybbi.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'pybbi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'venv' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'pybbi.egg-info/SOURCES.txt' copying bbi/cbbi.c -> build/lib.linux-x86_64-cpython-313/bbi copying bbi/cbbi.pxd -> build/lib.linux-x86_64-cpython-313/bbi copying bbi/cbbi.pyx -> build/lib.linux-x86_64-cpython-313/bbi running build_ext building 'bbi.cbbi' extension creating build/temp.linux-x86_64-cpython-313 creating build/temp.linux-x86_64-cpython-313/bbi gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fcf-protection -fexceptions -fcf-protection -fexceptions -fcf-protection -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -DWITH_GZFILEOP -I/usr/lib64/python3.13/site-packages/numpy/core/include -Iinclude -I/usr/include/libpng16 -I/usr/include/python3.13 -c bbi/cbbi.c -o build/temp.linux-x86_64-cpython-313/bbi/cbbi.o In file included from /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h:5, from bbi/cbbi.c:1250: /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from bbi/cbbi.c:1259: include/crTree.h:72:69: warning: ‘struct hash’ declared inside parameter list will not be visible outside of this definition or declaration 72 | void crTreeFileCreateInputCheck(struct crTreeItem *itemList, struct hash *chromHash, | ^~~~ include/crTree.h:79:16: warning: ‘struct hash’ declared inside parameter list will not be visible outside of this definition or declaration 79 | struct hash *chromHash, /* Hash of all chromosome names. */ | ^~~~ bbi/cbbi.c: In function ‘__pyx_f_3bbi_4cbbi_array_query_full’: bbi/cbbi.c:18076:42: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 18076 | __pyx_t_5 = (__pyx_v_interval->start == __pyx_v_prevEnd); | ^~ In function ‘__pyx_pf_3bbi_4cbbi_7BBIFile_12fetch’, inlined from ‘__pyx_pw_3bbi_4cbbi_7BBIFile_13fetch’ at bbi/cbbi.c:11283:13: bbi/cbbi.c:11985:5: warning: ‘__pyx_v_fetcher’ may be used uninitialized [-Wmaybe-uninitialized] 11985 | __pyx_f_3bbi_4cbbi_array_query_full(((PyArrayObject *)__pyx_v_out), __pyx_v_bins, __pyx_v_self->bbi, __pyx_v_fetcher, __pyx_v_chromName, __pyx_v_start, __pyx_v_end, __pyx_v_chromSize, __pyx_v_oob); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 507, __pyx_L1_error) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bbi/cbbi.c: In function ‘__pyx_pw_3bbi_4cbbi_7BBIFile_13fetch’: bbi/cbbi.c:11309:21: note: ‘__pyx_v_fetcher’ was declared here 11309 | BbiFetchIntervals __pyx_v_fetcher; | ^~~~~~~~~~~~~~~ bbi/cbbi.c: In function ‘__pyx_pf_3bbi_4cbbi_7BBIFile_14stackup’: bbi/cbbi.c:13287:7: warning: ‘__pyx_v_fetcher’ may be used uninitialized [-Wmaybe-uninitialized] 13287 | __pyx_f_3bbi_4cbbi_array_query_summarized(((PyArrayObject *)__pyx_t_2), __pyx_v_bins, __pyx_v_self->bbi, __pyx_v_fetcher, __pyx_v_chromName, __pyx_v_start, __pyx_v_end, __pyx_v_chromSize, __pyx_v_oob, __pyx_v_summary_type, __pyx_v_exact); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 639, __pyx_L1_error) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bbi/cbbi.c:12281:21: note: ‘__pyx_v_fetcher’ was declared here 12281 | BbiFetchIntervals __pyx_v_fetcher; | ^~~~~~~~~~~~~~~ gcc -shared -Wl,--no-as-needed -Wl,--no-as-needed -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-x86_64-cpython-313/bbi/cbbi.o -Lsrc/x86_64 -L/usr/lib64 -lkent -lz -lssl -lcrypto -lpng16 -o build/lib.linux-x86_64-cpython-313/bbi/cbbi.cpython-313-x86_64-linux-gnu.so installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/bbi copying build/lib.linux-x86_64-cpython-313/bbi/__init__.py -> build/bdist.linux-x86_64/wheel/bbi copying build/lib.linux-x86_64-cpython-313/bbi/_bbi.py -> build/bdist.linux-x86_64/wheel/bbi copying build/lib.linux-x86_64-cpython-313/bbi/cbbi.c -> build/bdist.linux-x86_64/wheel/bbi copying build/lib.linux-x86_64-cpython-313/bbi/cbbi.pxd -> build/bdist.linux-x86_64/wheel/bbi copying build/lib.linux-x86_64-cpython-313/bbi/cbbi.pyx -> build/bdist.linux-x86_64/wheel/bbi copying build/lib.linux-x86_64-cpython-313/bbi/cbbi.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/bbi running install_egg_info Copying pybbi.egg-info to build/bdist.linux-x86_64/wheel/pybbi-0.4.0-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/pybbi-0.4.0.dist-info/WHEEL creating '/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir/pip-wheel-xrmpc2vb/.tmp-d5f72e9v/pybbi-0.4.0-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'bbi/__init__.py' adding 'bbi/_bbi.py' adding 'bbi/cbbi.c' adding 'bbi/cbbi.cpython-313-x86_64-linux-gnu.so' adding 'bbi/cbbi.pxd' adding 'bbi/cbbi.pyx' adding 'pybbi-0.4.0.dist-info/LICENSE' adding 'pybbi-0.4.0.dist-info/METADATA' adding 'pybbi-0.4.0.dist-info/WHEEL' adding 'pybbi-0.4.0.dist-info/top_level.txt' adding 'pybbi-0.4.0.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for pybbi (pyproject.toml): finished with status 'done' Created wheel for pybbi: filename=pybbi-0.4.0-cp313-cp313-linux_x86_64.whl size=1457272 sha256=feb367814e9275e8274e48fbb2cf5c4a8d8f54e0d851f4e4e26c5926172b9aec Stored in directory: /builddir/.cache/pip/wheels/f1/5d/df/b87e2626f99e390136bd344f8d64a63ef72d389afb84c06820 Successfully built pybbi Reading metadata from /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir/pybbi-0.4.0-cp313-cp313-linux_x86_64.whl Handling numpy from built wheel metadata: Requires-Dist (pybbi) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling pytest ; extra == 'test' from built wheel metadata: Requires-Dist (pybbi) Requirement not satisfied: pytest ; extra == 'test' Handling pandas ; extra == 'test' from built wheel metadata: Requires-Dist (pybbi) Requirement not satisfied: pandas ; extra == 'test' + cat /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pybbi-0.4.0-2.fc41.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pybbi.spec'], chrootPath='/var/lib/mock/f41-build-52001526-6225215/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueraiseExc=FalseprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '2c9e09b46f59451693e2a8cf8b1afc61', '-D', '/var/lib/mock/f41-build-52001526-6225215/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -br --noprep --noclean --target x86_64 --nodeps /builddir/build/SPECS/python-pybbi.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1718668800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.1jzL3x + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + cd pybbi-0.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir --output /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-buildrequires -x test -w Handling Cython >=0.29; python_version<'3.8' from build-system.requires Ignoring alien requirement: Cython >=0.29; python_version<'3.8' Handling Cython >=0.29.14; python_version=='3.8' from build-system.requires Ignoring alien requirement: Cython >=0.29.14; python_version=='3.8' Handling Cython >=0.29.15; python_version>='3.9' from build-system.requires Requirement satisfied: Cython >=0.29.15; python_version>='3.9' (installed: Cython 3.0.9) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 1.26.4) Handling pkgconfig from build-system.requires Requirement satisfied: pkgconfig (installed: pkgconfig 1.5.5) Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 69.2.0) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.43.0) /usr/lib/python3.13/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'build_ext' warnings.warn(msg) running egg_info writing pybbi.egg-info/PKG-INFO writing dependency_links to pybbi.egg-info/dependency_links.txt writing requirements to pybbi.egg-info/requires.txt writing top-level names to pybbi.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'pybbi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'venv' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'pybbi.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) Reading metadata from /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir/pybbi-0.4.0-cp313-cp313-linux_x86_64.whl Handling numpy from built wheel metadata: Requires-Dist (pybbi) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling pytest ; extra == 'test' from built wheel metadata: Requires-Dist (pybbi) Requirement satisfied: pytest ; extra == 'test' (installed: pytest 7.4.3) Handling pandas ; extra == 'test' from built wheel metadata: Requires-Dist (pybbi) Requirement satisfied: pandas ; extra == 'test' (installed: pandas 2.2.1) + cat /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pybbi-0.4.0-2.fc41.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --noclean --target x86_64 /builddir/build/SPECS/python-pybbi.spec'], chrootPath='/var/lib/mock/f41-build-52001526-6225215/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '87173f2378ca40e888e465ee5f52a6e8', '-D', '/var/lib/mock/f41-build-52001526-6225215/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.z9b57hvy:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --noclean --target x86_64 /builddir/build/SPECS/python-pybbi.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1718668800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.jX0P5T + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + cd pybbi-0.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir --output /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-buildrequires -x test -w Handling Cython >=0.29; python_version<'3.8' from build-system.requires Ignoring alien requirement: Cython >=0.29; python_version<'3.8' Handling Cython >=0.29.14; python_version=='3.8' from build-system.requires Ignoring alien requirement: Cython >=0.29.14; python_version=='3.8' Handling Cython >=0.29.15; python_version>='3.9' from build-system.requires Requirement satisfied: Cython >=0.29.15; python_version>='3.9' (installed: Cython 3.0.9) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 1.26.4) Handling pkgconfig from build-system.requires Requirement satisfied: pkgconfig (installed: pkgconfig 1.5.5) Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 69.2.0) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.43.0) /usr/lib/python3.13/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'build_ext' warnings.warn(msg) running egg_info writing pybbi.egg-info/PKG-INFO writing dependency_links to pybbi.egg-info/dependency_links.txt writing requirements to pybbi.egg-info/requires.txt writing top-level names to pybbi.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'pybbi.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*' found under directory 'venv' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'pybbi.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) Reading metadata from /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir/pybbi-0.4.0-cp313-cp313-linux_x86_64.whl Handling numpy from built wheel metadata: Requires-Dist (pybbi) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling pytest ; extra == 'test' from built wheel metadata: Requires-Dist (pybbi) Requirement satisfied: pytest ; extra == 'test' (installed: pytest 7.4.3) Handling pandas ; extra == 'test' from built wheel metadata: Requires-Dist (pybbi) Requirement satisfied: pandas ; extra == 'test' (installed: pandas 2.2.1) + cat /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.3XWJNt + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + '[' /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-pybbi-0.4.0-build + mkdir /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pybbi-0.4.0 ++ ls /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir/pybbi-0.4.0-cp313-cp313-linux_x86_64.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=pybbi==0.4.0 + '[' -z pybbi==0.4.0 ']' + TMPDIR=/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir pybbi==0.4.0 Using pip 24.1.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/pyproject-wheeldir Processing ./pyproject-wheeldir/pybbi-0.4.0-cp313-cp313-linux_x86_64.whl Installing collected packages: pybbi Successfully installed pybbi-0.4.0 + '[' -d /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + site_dirs+=("/usr/lib64/python3.13/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.13/site-packages/pybbi-0.4.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pybbi-0.4.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT --record /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pybbi-0.4.0.dist-info/RECORD --output /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pybbi-0.4.0.dist-info/RECORD removed '/builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pybbi-0.4.0.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pybbi-0.4.0.dist-info/REQUESTED removed '/builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pybbi-0.4.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-pybbi-0.4.0-build/python-pybbi-0.4.0-2.fc41.x86_64-pyproject-record --prefix /usr -l bbi + /usr/bin/find-debuginfo -j48 --strict-build-id -m -i --build-id-seed 0.4.0-2.fc41 --unique-debug-suffix -0.4.0-2.fc41.x86_64 --unique-debug-src-base python-pybbi-0.4.0-2.fc41.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/python-pybbi-0.4.0-2.fc41.x86_64 4518 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j48 Bytecompiling .py files below /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j48 /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/bbi/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/bbi/__pycache__/_bbi.cpython-313.pyc: rewriting with normalized contents Scanned 21 directories and 113 files, processed 2 inodes, 2 modified (0 replaced + 2 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/python-pybbi-0.4.0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.eJOpPe + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pybbi-0.4.0 + k='not test_sigs' + k='not test_sigs and not test_aws_403_redirect' + k='not test_sigs and not test_aws_403_redirect and not test_chromsizes' + k='not test_sigs and not test_aws_403_redirect and not test_chromsizes and not test_fetch_remote' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=48 + /usr/bin/pytest -v --import-mode=importlib -k 'not test_sigs and not test_aws_403_redirect and not test_chromsizes and not test_fetch_remote' ============================= test session starts ============================== platform linux -- Python 3.13.0b3, pytest-7.4.3, pluggy-1.3.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0 collecting ... collected 22 items / 8 deselected / 14 selected tests/test_bbi.py::test_fetch[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigWigExample.bw] PASSED [ 7%] tests/test_bbi.py::test_fetch[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigBedExample.bb] PASSED [ 14%] tests/test_bbi.py::test_fetch_missing[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigWigExample.bw] PASSED [ 21%] tests/test_bbi.py::test_fetch_missing[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigBedExample.bb] PASSED [ 28%] tests/test_bbi.py::test_fetch_oob[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigWigExample.bw] PASSED [ 35%] tests/test_bbi.py::test_fetch_oob[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigBedExample.bb] PASSED [ 42%] tests/test_bbi.py::test_fetch_intervals[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigWigExample.bw] PASSED [ 50%] tests/test_bbi.py::test_fetch_intervals[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigBedExample.bb] PASSED [ 57%] tests/test_bbi.py::test_fetch_summary_stats[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigWigExample.bw] PASSED [ 64%] tests/test_bbi.py::test_fetch_summary_stats[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigBedExample.bb] PASSED [ 71%] tests/test_bbi.py::test_stackup[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigWigExample.bw] PASSED [ 78%] tests/test_bbi.py::test_stackup[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigBedExample.bb] PASSED [ 85%] tests/test_bbi.py::test_fetch_zoom_records[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigWigExample.bw] PASSED [ 92%] tests/test_bbi.py::test_fetch_zoom_records[/builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/tests/bigBedExample.bb] PASSED [100%] ======================= 14 passed, 8 deselected in 0.72s ======================= + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-pybbi-0.4.0-2.fc41.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Ez7SJG + umask 022 + cd /builddir/build/BUILD/python-pybbi-0.4.0-build + cd pybbi-0.4.0 + DOCDIR=/builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/share/doc/python3-pybbi + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/share/doc/python3-pybbi + cp -pr /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/README.md /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/share/doc/python3-pybbi + cp -pr /builddir/build/BUILD/python-pybbi-0.4.0-build/pybbi-0.4.0/CITATION.cff /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT/usr/share/doc/python3-pybbi + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-pybbi = 0.4.0-2.fc41 python3-pybbi = 0.4.0-2.fc41 python3-pybbi(x86-64) = 0.4.0-2.fc41 python3.13-pybbi = 0.4.0-2.fc41 python3.13dist(pybbi) = 0.4 python3dist(pybbi) = 0.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.15)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.28)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcrypto.so.3()(64bit) libcrypto.so.3(OPENSSL_3.0.0)(64bit) libssl.so.3()(64bit) libssl.so.3(OPENSSL_3.0.0)(64bit) libz.so.1()(64bit) python(abi) = 3.13 python3.13dist(numpy) rtld(GNU_HASH) Recommends: python3dist(pandas) Processing files: python-pybbi-debugsource-0.4.0-2.fc41.x86_64 Provides: python-pybbi-debugsource = 0.4.0-2.fc41 python-pybbi-debugsource(x86-64) = 0.4.0-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-pybbi-debuginfo-0.4.0-2.fc41.x86_64 Provides: debuginfo(build-id) = b9f633f1ddc29686eeeb5cfa9b59320a21905b04 python-pybbi-debuginfo = 0.4.0-2.fc41 python3-pybbi-debuginfo = 0.4.0-2.fc41 python3-pybbi-debuginfo(x86-64) = 0.4.0-2.fc41 python3.13-pybbi-debuginfo = 0.4.0-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-pybbi-debugsource(x86-64) = 0.4.0-2.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-pybbi-0.4.0-build/BUILDROOT Wrote: /builddir/build/SRPMS/python-pybbi-0.4.0-2.fc41.src.rpm Wrote: /builddir/build/RPMS/python3-pybbi-debuginfo-0.4.0-2.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/python3-pybbi-0.4.0-2.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/python-pybbi-debugsource-0.4.0-2.fc41.x86_64.rpm Child return code was: 0