Mock Version: 1.4.19 Mock Version: 1.4.19 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/octave-iso2mesh.spec'], chrootPath='/var/lib/mock/f29-build-17774216-1280435/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/octave-iso2mesh.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: i686 Building for target i686 Wrote: /builddir/build/SRPMS/octave-iso2mesh-1.9.1-3.fc29.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/octave-iso2mesh.spec'], chrootPath='/var/lib/mock/f29-build-17774216-1280435/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/octave-iso2mesh.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: i686 Building for target i686 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.3SEpU5 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf iso2mesh-1.9.1 + /usr/bin/gzip -dc /builddir/build/SOURCES/cork-0.9.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/gzip -dc /builddir/build/SOURCES/iso2mesh-1.9.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd iso2mesh-1.9.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + cd /builddir/build/BUILD + /usr/bin/gzip -dc /builddir/build/SOURCES/meshfix-1.2.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd meshfix-1.2.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (meshfix-remove-rpath.patch):' Patch #0 (meshfix-remove-rpath.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file CMakeLists.txt + cd /builddir/build/BUILD + /usr/bin/gzip -dc /builddir/build/SOURCES/tetgen1.5.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd iso2mesh-1.9.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -rf tools/cork + rm -rf tools/meshfix + rm -rf tools/tetgen + mv ../cork-0.9 tools/cork + mv ../meshfix-1.2.1 tools/meshfix + mv ../tetgen1.5.1 tools/tetgen + rm -rf bin/cgalmesh.mexa64 bin/cgalmesh.mexglx bin/cgalmesh.mexmaci bin/cgalmesh.mexmaci64 bin/cgalpoly.mexa64 bin/cgalpoly.mexglx bin/cgalpoly.mexmaci bin/cgalpoly.mexmaci64 bin/cgalsimp2.mexglx bin/cgalsimp2.mexmac bin/cgalsimp2.mexmaci bin/cgalsimp2.mexmaci64 bin/cgalsurf.mexa64 bin/cgalsurf.mexglx bin/cgalsurf.mexmaci bin/cgalsurf.mexmaci64 bin/cork.mexa64 bin/cork.mexmaci64 bin/gtsrefine.mexarmhf bin/gtsrefine.mexglx bin/gtsrefine.mexmaci bin/gtsrefine.mexmaci64 bin/gtsset.mexa64 bin/gtsset.mexarmhf bin/gtsset.mexglx bin/gtsset.mexmaci bin/gtsset.mexmaci64 bin/jmeshlib.mexa64 bin/jmeshlib.mexarmhf bin/jmeshlib.mexglx bin/jmeshlib.mexmac bin/jmeshlib.mexmaci bin/jmeshlib.mexmaci64 bin/meshfix.mexa64 bin/meshfix.mexarmhf bin/meshfix.mexglx bin/meshfix.mexmaci bin/meshfix.mexmaci64 bin/tetgen.mexa64 bin/tetgen.mexarmhf bin/tetgen.mexglx bin/tetgen.mexmac bin/tetgen.mexmaci bin/tetgen.mexmaci64 bin/tetgen1.5.mexa64 bin/tetgen1.5.mexglx bin/tetgen1.5.mexmaci64 bin/cgalmesh.exe bin/cgalpoly.exe bin/cgalsimp2.exe bin/cgalsurf.exe bin/cork.exe bin/gtsrefine.exe bin/gtsset.exe bin/jmeshlib.exe bin/meshfix.exe bin/meshfix_x86_64.exe bin/tetgen.exe bin/tetgen1.5.exe bin/gmp-vc80-mt.dll bin/mpfr-vc80-mt.dll + cp COPYING.txt COPYING + cat + cat + mkdir -p inst/ + rm -rf base64decode base64encode fast_match_bracket gzipdecode gzipencode jdatadecode jdataencode jnifticreate loadjnifti loadjson loadmsgpack loadnifti loadubjson lz4decode lz4encode lz4hcdecode lz4hcencode lzipdecode lzipencode lzmadecode lzmaencode match_bracket nestbracket2dim nifticreate nii2jnii niicodemap niiformat readnifti savebnii savejnifti savejnii savemsgpack savenifti saveubjson zlibdecode zlibencode + mv advancefront.m barydualmesh.m base64decode.m base64encode.m bbxflatsegment.m binsurface.m bwislands.m cgals2m.m cgalv2m.m deislands2d.m deislands3d.m delendelem.m deletemeshfile.m edgeneighbors.m elemfacecenter.m elemvolume.m extractloops.m extrudecurve.m extrudesurf.m faceneighbors.m fallbackexeext.m fast_match_bracket.m fillholes3d.m fillsurf.m finddisconnsurf.m flatsegment.m getexeext.m getintersecttri.m getoptkey.m getplanefrom3pt.m getvarfrom.m gzipdecode.m gzipencode.m highordertet.m i2m.m imedge3d.m img2mesh.m innersurf.m insurface.m internalpoint.m iso2meshver.m isoctavemesh.m jdatadecode.m jdataencode.m jnifticreate.m jsonopt.m latticegrid.m loadjnifti.m loadjson.m loadmsgpack.m loadnifti.m loadubjson.m lz4decode.m lz4encode.m lz4hcdecode.m lz4hcencode.m lzipdecode.m lzipencode.m lzmadecode.m lzmaencode.m m2v.m maskdist.m match_bracket.m maxsurf.m mcpath.m memmapstream.m mergemesh.m mergestruct.m mergesurf.m mesh2mask.m mesh2vol.m meshabox.m meshacylinder.m meshanellip.m meshasphere.m meshcentroid.m meshcheckrepair.m meshconn.m meshcylinders.m meshedge.m mesheuler.m meshface.m meshgrid5.m meshgrid6.m meshinterp.m meshquality.m meshrefine.m meshremap.m meshreorient.m meshresample.m meshunitsphere.m mwpath.m neighborelem.m nestbracket2dim.m nifticreate.m nii2jnii.m niicodemap.m niiformat.m nodevolume.m orderloopedge.m orthdisk.m outersurf.m plotedges.m plotmesh.m plotsurf.m plottetra.m qmeshcut.m raysurf.m raytrace.m readasc.m readgts.m readinr.m readmedit.m readmptiff.m readnifti.m readnirfast.m readoff.m readsmf.m readtetgen.m remeshsurf.m removedupelem.m removedupnodes.m removeisolatednode.m removeisolatedsurf.m rotatevec3d.m rotmat2vec.m s2m.m s2v.m saveabaqus.m saveasc.m savebinstl.m savebnii.m savedxf.m savegts.m saveinr.m savejmesh.m savejnifti.m savejnii.m savejson.m savemedit.m savemphtxt.m savemsgpack.m savemsh.m savenifti.m savenirfast.m saveoff.m savesmf.m savestl.m savesurfpoly.m savetetgenele.m savetetgennode.m saveubjson.m savevrml.m smoothbinvol.m smoothsurf.m sms.m sortmesh.m surf2mesh.m surf2vol.m surf2volz.m surfaceclean.m surfacenorm.m surfboolean.m surfdiffuse.m surfedge.m surfinterior.m surfpart.m surfplane.m surfreorient.m surfseeds.m surfvolume.m thickenbinvol.m thinbinvol.m uniqedges.m uniqfaces.m v2m.m v2s.m varargin2struct.m vol2mesh.m vol2restrictedtri.m vol2surf.m volface.m volmap2mesh.m zlibdecode.m zlibencode.m inst/ + mv img2mesh.fig inst/ + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.KXQi0D + umask 022 + cd /builddir/build/BUILD + cd iso2mesh-1.9.1 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + pushd tools ~/build/BUILD/iso2mesh-1.9.1/tools ~/build/BUILD/iso2mesh-1.9.1 + make if test -f cgalmesh/CMakeLists.txt; then cd cgalmesh && cmake . && cd ..; fi -- The C compiler identification is GNU 8.3.1 -- The CXX compiler identification is GNU 8.3.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- __cplusplus is 201402 -- --> Do not link with Boost.Thread -- Boost version: 1.66.0 -- Boost include dirs: /usr/include -- Boost libraries: -- Build type: -- USING CXXFLAGS = '-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Requested component: ImageIO -- Requested component: MPFR -- Requested component: GMP -- Boost version: 1.66.0 CMake Warning at /usr/lib/cmake/CGAL/CGAL_enable_end_of_configuration_hook.cmake:100 (message): ======================================================================= CGAL performance notice: The variable CMAKE_BUILD_TYPE is set to "". For performance reasons, you should set CMAKE_BUILD_TYPE to "Release". Set CGAL_DO_NOT_WARN_ABOUT_CMAKE_BUILD_TYPE to TRUE if you want to disable this warning. ======================================================================= Call Stack (most recent call first): CMakeLists.txt:9999 (CGAL_run_at_the_end_of_configuration) -- Configuring done -- Generating done -- Build files have been written to: /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalmesh make -C cgalmesh --no-print-directory Scanning dependencies of target mesh_3D_image [ 25%] Building CXX object CMakeFiles/mesh_3D_image.dir/mesh_3D_image.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalmesh/mesh_3D_image.cpp:20:15: warning: 'template class CGAL::Labeled_image_mesh_domain_3' is deprecated [-Wdeprecated-declarations] typedef CGAL::Labeled_image_mesh_domain_3 Mesh_domain; ^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalmesh/mesh_3D_image.cpp:7: /usr/include/CGAL/Labeled_image_mesh_domain_3.h:59:1: note: declared here Labeled_image_mesh_domain_3 ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalmesh/mesh_3D_image.cpp: In function 'int main(int, char**)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalmesh/mesh_3D_image.cpp:73:15: warning: 'CGAL::{anonymous}::default_random' is deprecated [-Wdeprecated-declarations] CGAL::default_random.restore_state(st); ^~~~~~~~~~~~~~ In file included from /usr/include/CGAL/Labeled_image_mesh_domain_3.h:35, from /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalmesh/mesh_3D_image.cpp:7: /usr/include/CGAL/Random.h:254:52: note: declared here namespace { CGAL_DEPRECATED_UNUSED CGAL::Random& default_random = get_default_random(); } ^~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalmesh/mesh_3D_image.cpp:120:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'unsigned int'} [-Wsign-compare] for (int i=0; i::size_type' {aka 'unsigned int'} [-Wsign-compare] for (int i=0; i Do not link with Boost.Thread -- Boost version: 1.66.0 -- Boost include dirs: /usr/include -- Boost libraries: -- Build type: -- USING CXXFLAGS = '-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Requested component: MPFR -- Requested component: GMP -- Boost version: 1.66.0 -- Examples that use OpenMesh will not be compiled. CMake Warning at /usr/lib/cmake/CGAL/CGAL_enable_end_of_configuration_hook.cmake:100 (message): ======================================================================= CGAL performance notice: The variable CMAKE_BUILD_TYPE is set to "". For performance reasons, you should set CMAKE_BUILD_TYPE to "Release". Set CGAL_DO_NOT_WARN_ABOUT_CMAKE_BUILD_TYPE to TRUE if you want to disable this warning. ======================================================================= Call Stack (most recent call first): CMakeLists.txt:9999 (CGAL_run_at_the_end_of_configuration) -- Configuring done -- Generating done -- Build files have been written to: /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalsimp2 make -C cgalsimp2 --no-print-directory Scanning dependencies of target edge_collapse_enriched_polyhedron [ 50%] Building CXX object CMakeFiles/edge_collapse_enriched_polyhedron.dir/edge_collapse_enriched_polyhedron.cpp.o [100%] Linking CXX executable edge_collapse_enriched_polyhedron [100%] Built target edge_collapse_enriched_polyhedron if test -f cgalsurf/CMakeLists.txt; then cd cgalsurf && cmake . && cd ..; fi -- The C compiler identification is GNU 8.3.1 -- The CXX compiler identification is GNU 8.3.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- __cplusplus is 201402 -- --> Do not link with Boost.Thread -- Boost version: 1.66.0 -- Boost include dirs: /usr/include -- Boost libraries: -- Build type: -- USING CXXFLAGS = '-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Requested component: ImageIO -- Requested component: MPFR -- Requested component: GMP CMake Warning at /usr/lib/cmake/CGAL/CGAL_enable_end_of_configuration_hook.cmake:100 (message): ======================================================================= CGAL performance notice: The variable CMAKE_BUILD_TYPE is set to "". For performance reasons, you should set CMAKE_BUILD_TYPE to "Release". Set CGAL_DO_NOT_WARN_ABOUT_CMAKE_BUILD_TYPE to TRUE if you want to disable this warning. ======================================================================= Call Stack (most recent call first): CMakeLists.txt:9999 (CGAL_run_at_the_end_of_configuration) -- Configuring done -- Generating done -- Build files have been written to: /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalsurf make -C cgalsurf --no-print-directory Scanning dependencies of target mesh_a_3d_gray_image [ 50%] Building CXX object CMakeFiles/mesh_a_3d_gray_image.dir/mesh_a_3d_gray_image.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalsurf/mesh_a_3d_gray_image.cpp: In function 'int main(int, char**)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalsurf/mesh_a_3d_gray_image.cpp:45:9: warning: 'CGAL::{anonymous}::default_random' is deprecated [-Wdeprecated-declarations] CGAL::default_random.restore_state(st); ^~~~~~~~~~~~~~ In file included from /usr/include/CGAL/generators.h:37, from /usr/include/CGAL/point_generators_3.h:34, from /usr/include/CGAL/Surface_mesher/Sphere_oracle_3.h:30, from /usr/include/CGAL/Surface_mesh_traits_generator_3.h:27, from /usr/include/CGAL/Surface_mesher_generator.h:33, from /usr/include/CGAL/make_surface_mesh.h:27, from /builddir/build/BUILD/iso2mesh-1.9.1/tools/cgalsurf/mesh_a_3d_gray_image.cpp:6: /usr/include/CGAL/Random.h:254:52: note: declared here namespace { CGAL_DEPRECATED_UNUSED CGAL::Random& default_random = get_default_random(); } ^~~~~~~~~~~~~~ [100%] Linking CXX executable mesh_a_3d_gray_image [100%] Built target mesh_a_3d_gray_image if test -f cork/CMakeLists.txt; then cd cork && cmake . && cd ..; fi make -C cork --no-print-directory Compiling obj/cork.o In file included from src/mesh/mesh.h:44, from src/cork.cpp:28: src/mesh/mesh.decl.h: In member function 'Mesh::EGraphEntry& Mesh::EGraphCache::operator()(uint, uint) [with Edata = int; VertData = CorkVertex; TriData = CorkTriangle]': src/mesh/mesh.decl.h:265:12: warning: '.Mesh::EGraphEntry::data' may be used uninitialized in this function [-Wmaybe-uninitialized] struct EGraphEntry { ^~~~~~~~~~~ Compiling obj/util/timer.o Compiling obj/util/log.o Compiling obj/isct/empty3d.o Compiling obj/isct/quantization.o Compiling obj/file_formats/files.o Compiling obj/file_formats/ifs.o Compiling obj/file_formats/off.o Compiling the Triangle library src/isct/triangle.c: In function 'segmentintersection': src/isct/triangle.c:11709:28: warning: variable 'collinear' set but not used [-Wunused-but-set-variable] enum finddirectionresult collinear; ^~~~~~~~~ src/isct/triangle.c: In function 'incircleadapt': src/isct/triangle.c:5856:20: warning: 'cytablen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(cytablen, cytab, cdytail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/isct/triangle.c:5814:20: warning: 'cxtablen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(cxtablen, cxtab, cdxtail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/isct/triangle.c:5759:20: warning: 'bytcalen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(bytcalen, bytca, bdytail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/isct/triangle.c:5620:20: warning: 'axtbclen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(axtbclen, axtbc, adxtail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/isct/triangle.c:5662:20: warning: 'aytbclen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(aytbclen, aytbc, adytail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bundling lib/libcork.a updating include/cork.h Compiling obj/off2obj.o Linking off2obj Compiling obj/main.o Linking cork command line tool if test -f meshfix/CMakeLists.txt; then cd meshfix && cmake . && cd ..; fi -- The C compiler identification is GNU 8.3.1 -- The CXX compiler identification is GNU 8.3.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:25 (add_custom_command): Policy CMP0040 is not set: The target in the TARGET signature of add_custom_command() must exist and must be defined in the current directory. Run "cmake --help-policy CMP0040" for policy details. Use the cmake_policy command to set the policy and suppress this warning. No TARGET 'meshfix' has been created in this directory. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done -- Build files have been written to: /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix make -C meshfix --no-print-directory Scanning dependencies of target jmesh [ 2%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/PRIMITIVES/binTree.cpp.o [ 4%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/PRIMITIVES/clusterGraph.cpp.o [ 6%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/PRIMITIVES/dijkstraGraph.cpp.o [ 8%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/PRIMITIVES/graph.cpp.o [ 10%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/PRIMITIVES/heap.cpp.o [ 12%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/PRIMITIVES/jqsort.cpp.o [ 14%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/PRIMITIVES/list.cpp.o [ 16%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/PRIMITIVES/matrix.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp: In member function 'void SymMatrix3x3::diagonalize(double*, double*) const': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] a--; ~^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:332:3: warning: array subscript -1 is below array bounds of 'double [9]' [-Warray-bounds] v--; ~^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:332:3: warning: array subscript -1 is below array bounds of 'double [9]' [-Warray-bounds] [ 18%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/MESH_STRUCTURE/checkAndRepair.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/checkAndRepair.cpp: In member function 'int Triangulation::removeSmallestComponents(unsigned int)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/checkAndRepair.cpp:425:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] if( i++ >= number_to_keep ) { ~~~~^~~~~~~~~~~~~~~~~ [ 20%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/MESH_STRUCTURE/edge.cpp.o [ 22%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/MESH_STRUCTURE/point.cpp.o [ 25%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/MESH_STRUCTURE/tin.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/tin.cpp: In member function 'Triangulation* Triangulation::extractShell(Triangle*, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/tin.cpp:981:15: warning: unused variable 'nin' [-Wunused-variable] Node *n, *nin; ^~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/tin.cpp: In member function 'List* Triangulation::getComponentsList()': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/tin.cpp:1257:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (t = (Triangle*) todo.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 27%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/MESH_STRUCTURE/triangle.cpp.o [ 29%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/MESH_STRUCTURE/vertex.cpp.o [ 31%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/MESH_STRUCTURE/io.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp: In function 'bool sameString(const char*, const char*)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:89:35: warning: operation on 'i' may be undefined [-Wsequence-point] if (tolower(a[i]) != tolower(b[i++])) return false; ~^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp: In function 'void ply_readOverhead(FILE*, int, int)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:993:5: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else] if (format == PLY_FORMAT_ASCII) ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp: In member function 'int Triangulation::loadSTL(const char*)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1322:12: warning: variable 't' set but not used [-Wunused-but-set-variable] Triangle *t; ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp: In member function 'int Triangulation::saveMSH(const char*, char, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1446:21: warning: unused variable 'mask' [-Wunused-variable] char triname[256], mask; ^~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1449:14: warning: unused variable 'vorg' [-Wunused-variable] Vertex *v, *vorg; ^~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1451:8: warning: unused variable 'e' [-Wunused-variable] Edge *e, *eorg; ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1451:12: warning: unused variable 'eorg' [-Wunused-variable] Edge *e, *eorg; ^~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1455:8: warning: unused variable 'info' [-Wunused-variable] void *info; ^~~~ [ 33%] Building CXX object contrib/JMeshLib/CMakeFiles/jmesh.dir/src/JMESH/jmesh.cpp.o [ 35%] Linking CXX static library libjmesh.a [ 35%] Built target jmesh Scanning dependencies of target meshfix [ 37%] Building C object CMakeFiles/meshfix.dir/contrib/jrs_predicates/jrs_predicates.c.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/jrs_predicates/jrs_predicates.c: In function 'incircleadapt': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/jrs_predicates/jrs_predicates.c:2952:20: warning: 'cytablen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(cytablen, cytab, cdytail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/jrs_predicates/jrs_predicates.c:2910:20: warning: 'cxtablen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(cxtablen, cxtab, cdxtail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/jrs_predicates/jrs_predicates.c:2855:20: warning: 'bytcalen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(bytcalen, bytca, bdytail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/jrs_predicates/jrs_predicates.c:2716:20: warning: 'axtbclen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(axtbclen, axtbc, adxtail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/jrs_predicates/jrs_predicates.c:2758:20: warning: 'aytbclen' may be used uninitialized in this function [-Wmaybe-uninitialized] temp16alen = scale_expansion_zeroelim(aytbclen, aytbc, adytail, temp16a); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object CMakeFiles/meshfix.dir/src/detectIntersections.cpp.o In file included from /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/include/jmesh.h:33, from /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/include/exttrimesh.h:31, from /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/include/detectIntersections.h:31, from /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/detectIntersections.cpp:28: /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/include/point.h: In function 'Point* edgeIntersectsTriangle(Edge*, Triangle*, Edge**)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/include/point.h:83:62: warning: 'v4' may be used uninitialized in this function [-Wmaybe-uninitialized] Point operator-(const Point& p) const {return Point(x-p.x, y-p.y, z-p.z);} ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/detectIntersections.cpp:69:49: note: 'v4' was declared here Vertex *v1=t->v1(), *v2=t->v2(), *v3=t->v3(), *v4, *v0; ^~ In file included from /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/include/jmesh.h:35, from /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/include/exttrimesh.h:31, from /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/include/detectIntersections.h:31, from /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/detectIntersections.cpp:28: /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/include/edge.h:61:55: warning: 'v0' may be used uninitialized in this function [-Wmaybe-uninitialized] bool hasVertex(const Vertex *v) const {return (v1==v || v2==v);} ~~~~~~~^~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/detectIntersections.cpp:69:54: note: 'v0' was declared here Vertex *v1=t->v1(), *v2=t->v2(), *v3=t->v3(), *v4, *v0; ^~ [ 41%] Building CXX object CMakeFiles/meshfix.dir/src/holeFilling.cpp.o [ 43%] Building CXX object CMakeFiles/meshfix.dir/src/sparseLSystem.cpp.o [ 45%] Building CXX object CMakeFiles/meshfix.dir/src/mwExtensions.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'int ExtTriMesh::joinComponentsBiggestBoundaryPair(List*, List*, double)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:121:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (loop = (List*) cn.boundaries->popHead()) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:126:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (loop = (List*) cm.boundaries->popHead()) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'bool ExtTriMesh::joinBoundaryPair(List*, List*)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:143:16: warning: unused variable 'd' [-Wunused-variable] double d = getClosestPartner(v, bl2, &w); ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'int ExtTriMesh::moveVerticesInwards(Point&, std::map&, double, double)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:219:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (c = (di_cell *)todo.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:234:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (c = (di_cell *)cells.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:218:12: warning: unused variable 'stepsize2' [-Wunused-variable] double stepsize2 = stepsize*stepsize; ^~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:230:15: warning: unused variable 'm' [-Wunused-variable] Node *n, *m; ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:231:19: warning: unused variable 't2' [-Wunused-variable] Triangle *t, *t2; ^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'bool ExtTriMesh::decoupleFirstFromSecondComponent(double, unsigned int, bool, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:280:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] while(iteration_counter++ < max_iterations) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:332:26: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] if(iteration_counter < max_iterations) return true; ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'void ExtTriMesh::cutFirstWithSecondComponent(double, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:356:14: warning: unused variable 'nt' [-Wunused-variable] unsigned nt = this->markTrianglesInsideComponent(markBit, cutBit, constantBit, cutOuter); ^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'int ExtTriMesh::markTrianglesInsideComponent(short int, short int, short int, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:387:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while(t = (Triangle*) c->triangles.popHead()) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:395:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (c = (di_cell *)todo.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:440:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while(c = (di_cell*) cells.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:478:25: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while(t = (Triangle*) l->popHead()) if(!IS_VISITED(t)) { todo.appendHead(t); break; }; ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:483:25: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while(t = (Triangle*) todo.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:375:13: warning: unused variable 'vHlp' [-Wunused-variable] Vertex *vHlp; ^~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:416:9: warning: unused variable 'nintersections' [-Wunused-variable] int nintersections = this->selectIntersectingTriangles(); ^~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'int ExtTriMesh::moveTooCloseVerticesOutwards(double, short int, short int)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:616:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while(t = (Triangle*) c->triangles.popHead()) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:625:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (c = (di_cell *)todo.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:650:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while(c = (di_cell*) cells.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:658:17: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while(t = (Triangle*) c->triangles.popHead()) if(IS_BIT(t, componentMarkBit2)) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'int ExtTriMesh::fineTune(double, int, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:763:16: warning: unused variable 'nt' [-Wunused-variable] unsigned nt = this->markTrianglesInsideComponent(markBit, adjustBit, constantBit, treatFirstAsInner); ^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'int ExtTriMesh::markTrianglesInsideComponent(short int, short int, short int, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:470:55: warning: 'closest' may be used uninitialized in this function [-Wmaybe-uninitialized] Point meanNormal = closest->getNormal(); ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp: In member function 'int ExtTriMesh::moveVerticesInwards(Point&, std::map&, double, double)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/src/mwExtensions.cpp:245:50: warning: 'v2' may be used uninitialized in this function [-Wmaybe-uninitialized] v2->intersectionWithPlane(v1, &origin[v1], &p, &n); ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/meshfix.dir/src/smoothing.cpp.o [ 50%] Building C object CMakeFiles/meshfix.dir/contrib/OpenNL3.2.1/src/nl_single_file.c.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c: In function 'dtpsv_': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c:2505:26: warning: implicit declaration of function 'lsame_'; did you mean 'lgamma'? [-Wimplicit-function-declaration] if (!NL_FORTRAN_WRAP(lsame)(uplo, "U") && ^~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c:420:28: note: in definition of macro 'NL_FORTRAN_WRAP' #define NL_FORTRAN_WRAP(x) x##_ ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c:2526:18: warning: implicit declaration of function 'xerbla_' [-Wimplicit-function-declaration] NL_FORTRAN_WRAP(xerbla)("DTPSV ", &info); ^~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c:420:28: note: in definition of macro 'NL_FORTRAN_WRAP' #define NL_FORTRAN_WRAP(x) x##_ ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c: In function 'nlSolve_SUPERLU': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c:3513:5: warning: implicit declaration of function 'dCreate_CompCol_Matrix'; did you mean 'cCreate_CompCol_Matrix'? [-Wimplicit-function-declaration] dCreate_CompCol_Matrix( ^~~~~~~~~~~~~~~~~~~~~~ cCreate_CompCol_Matrix /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c:3521:5: warning: implicit declaration of function 'dCreate_Dense_Matrix'; did you mean 'cCreate_Dense_Matrix'? [-Wimplicit-function-declaration] dCreate_Dense_Matrix( ^~~~~~~~~~~~~~~~~~~~ cCreate_Dense_Matrix /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c:3557:5: warning: implicit declaration of function 'dgssv'; did you mean 'cgssv'? [-Wimplicit-function-declaration] dgssv(&options, &A, perm, perm_r, &L, &U, &B, &stat, &info); ^~~~~ cgssv /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c: In function 'nlSolve_CNC': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/OpenNL3.2.1/src/nl_single_file.c:3710:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ [ 52%] Building CXX object CMakeFiles/meshfix.dir/src/epsilonSampling.cpp.o [ 54%] Building CXX object CMakeFiles/meshfix.dir/src/simplification.cpp.o [ 56%] Building CXX object CMakeFiles/meshfix.dir/src/uniform.cpp.o [ 58%] Building CXX object CMakeFiles/meshfix.dir/src/cleaning.cpp.o [ 60%] Building CXX object CMakeFiles/meshfix.dir/meshfix.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/meshfix.cpp: In function 'bool joinClosestComponents(ExtTriMesh*, bool, bool, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/meshfix.cpp:84:9: warning: unused variable 'numtris' [-Wunused-variable] int numtris = tin->T.numels(); ^~~~~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/meshfix.cpp: In function 'int main(int, char**)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/meshfix.cpp:470:36: warning: 'outputFile' may be used uninitialized in this function [-Wmaybe-uninitialized] if(haveOutputFile) tin.saveMSH(outputFile); ~~~~~~~~~~~^~~~~~~~~~~~ [ 62%] Linking CXX executable meshfix [ 62%] Built target meshfix Scanning dependencies of target test_jmeshlib [ 64%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/PRIMITIVES/binTree.cpp.o [ 66%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/PRIMITIVES/clusterGraph.cpp.o [ 68%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/PRIMITIVES/dijkstraGraph.cpp.o [ 70%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/PRIMITIVES/graph.cpp.o [ 72%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/PRIMITIVES/heap.cpp.o [ 75%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/PRIMITIVES/jqsort.cpp.o [ 77%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/PRIMITIVES/list.cpp.o [ 79%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/PRIMITIVES/matrix.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp: In member function 'void SymMatrix3x3::diagonalize(double*, double*) const': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] a--; ~^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:327:3: warning: array subscript -1 is below array bounds of 'double [6]' [-Warray-bounds] /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:332:3: warning: array subscript -1 is below array bounds of 'double [9]' [-Warray-bounds] v--; ~^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/PRIMITIVES/matrix.cpp:332:3: warning: array subscript -1 is below array bounds of 'double [9]' [-Warray-bounds] [ 81%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/MESH_STRUCTURE/checkAndRepair.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/checkAndRepair.cpp: In member function 'int Triangulation::removeSmallestComponents(unsigned int)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/checkAndRepair.cpp:425:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] if( i++ >= number_to_keep ) { ~~~~^~~~~~~~~~~~~~~~~ [ 83%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/MESH_STRUCTURE/edge.cpp.o [ 85%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/MESH_STRUCTURE/point.cpp.o [ 87%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/MESH_STRUCTURE/tin.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/tin.cpp: In member function 'Triangulation* Triangulation::extractShell(Triangle*, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/tin.cpp:981:15: warning: unused variable 'nin' [-Wunused-variable] Node *n, *nin; ^~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/tin.cpp: In member function 'List* Triangulation::getComponentsList()': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/tin.cpp:1257:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (t = (Triangle*) todo.popHead()) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 89%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/MESH_STRUCTURE/triangle.cpp.o [ 91%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/MESH_STRUCTURE/vertex.cpp.o [ 93%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/MESH_STRUCTURE/io.cpp.o /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp: In function 'bool sameString(const char*, const char*)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:89:35: warning: operation on 'i' may be undefined [-Wsequence-point] if (tolower(a[i]) != tolower(b[i++])) return false; ~^~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp: In function 'void ply_readOverhead(FILE*, int, int)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:993:5: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else] if (format == PLY_FORMAT_ASCII) ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp: In member function 'int Triangulation::loadSTL(const char*)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1322:12: warning: variable 't' set but not used [-Wunused-but-set-variable] Triangle *t; ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp: In member function 'int Triangulation::saveMSH(const char*, char, bool)': /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1446:21: warning: unused variable 'mask' [-Wunused-variable] char triname[256], mask; ^~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1449:14: warning: unused variable 'vorg' [-Wunused-variable] Vertex *v, *vorg; ^~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1451:8: warning: unused variable 'e' [-Wunused-variable] Edge *e, *eorg; ^ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1451:12: warning: unused variable 'eorg' [-Wunused-variable] Edge *e, *eorg; ^~~~ /builddir/build/BUILD/iso2mesh-1.9.1/tools/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1455:8: warning: unused variable 'info' [-Wunused-variable] void *info; ^~~~ [ 95%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/src/JMESH/jmesh.cpp.o [ 97%] Building CXX object contrib/JMeshLib/CMakeFiles/test_jmeshlib.dir/test/test.cpp.o [100%] Linking CXX executable test_jmeshlib [100%] Built target test_jmeshlib if test -f meshfix/contrib/JMeshLib/test/CMakeLists.txt; then cd meshfix/contrib/JMeshLib/test && cmake . && cd ..; fi make -C meshfix/contrib/JMeshLib/test --no-print-directory cc -Wall -I../include -c test.cpp g++ -o jmeshlib test.o -L../ -ljmesh if test -f tetgen/CMakeLists.txt; then cd tetgen && cmake . && cd ..; fi -- The C compiler identification is GNU 8.3.1 -- The CXX compiler identification is GNU 8.3.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done -- Generating done -- Build files have been written to: /builddir/build/BUILD/iso2mesh-1.9.1/tools/tetgen make -C tetgen --no-print-directory g++ -O0 -c predicates.cxx g++ -O3 -o tetgen tetgen.cxx predicates.o -lm + popd ~/build/BUILD/iso2mesh-1.9.1 + pushd bin ~/build/BUILD/iso2mesh-1.9.1/bin ~/build/BUILD/iso2mesh-1.9.1 + ln -s tetgen1.5 tetgen + popd ~/build/BUILD/iso2mesh-1.9.1 + mkdir inst/bin + pushd bin ~/build/BUILD/iso2mesh-1.9.1/bin ~/build/BUILD/iso2mesh-1.9.1 + for exec in * + ln -s /usr/libexec/iso2mesh/README.txt ../inst/bin/README.txt + for exec in * + ln -s /usr/libexec/iso2mesh/cgalmesh ../inst/bin/cgalmesh + for exec in * + ln -s /usr/libexec/iso2mesh/cgalpoly ../inst/bin/cgalpoly + for exec in * + ln -s /usr/libexec/iso2mesh/cgalsimp2 ../inst/bin/cgalsimp2 + for exec in * + ln -s /usr/libexec/iso2mesh/cgalsurf ../inst/bin/cgalsurf + for exec in * + ln -s /usr/libexec/iso2mesh/cork ../inst/bin/cork + for exec in * + ln -s /usr/libexec/iso2mesh/jmeshlib ../inst/bin/jmeshlib + for exec in * + ln -s /usr/libexec/iso2mesh/meshfix ../inst/bin/meshfix + for exec in * + ln -s /usr/libexec/iso2mesh/tetgen ../inst/bin/tetgen + for exec in * + ln -s /usr/libexec/iso2mesh/tetgen1.5 ../inst/bin/tetgen1.5 + popd ~/build/BUILD/iso2mesh-1.9.1 + tar czf /var/tmp/iso2mesh-1.9.1.tar.gz -C /builddir/build/BUILD iso2mesh-1.9.1 + mkdir -p /builddir/build/BUILD/iso2mesh-1.9.1/build + octave -H -q --no-window-system --no-site-file --eval 'pkg build -verbose -nodeps /builddir/build/BUILD/iso2mesh-1.9.1/build /var/tmp/iso2mesh-1.9.1.tar.gz' + tar xf /var/tmp/iso2mesh-1.9.1.tar.gz -C /builddir/build/BUILD/iso2mesh-1.9.1/build + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.w0BTYg + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386 ++ dirname /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386 + cd iso2mesh-1.9.1 + mkdir -p /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages + mkdir -p /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/lib/octave/packages + octave -H -q --no-window-system --no-site-file --eval 'pkg("prefix","/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages","/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/lib/octave/packages");pkg("global_list",fullfile("/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave","octave_packages"));pkg("local_list",fullfile("/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave","octave_packages"));pkg("install","-nodeps","-verbose","/builddir/build/BUILD/iso2mesh-1.9.1/build/iso2mesh-1.9.1-any-none.tar.gz");unlink(pkg("local_list"));unlink(pkg("global_list"));' mkdir (/tmp/oct-CReXgh) untar (/builddir/build/BUILD/iso2mesh-1.9.1/build/iso2mesh-1.9.1-any-none.tar.gz, /tmp/oct-CReXgh) cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/cgalsurf' cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/meshfix' cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/cgalmesh' cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/cgalpoly' cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/cgalsimp2' cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/jmeshlib' cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/cork' cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/tetgen1.5' cp: not writing through dangling symlink '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/bin/README.txt' warning: doc_cache_create: unusable help text found in file 'fast_match_bracket' warning: doc_cache_create: unusable help text found in file 'match_bracket' warning: doc_cache_create: unusable help text found in file 'nestbracket2dim' + '[' -e /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/octave/packages/iso2mesh-1.9.1/packinfo/on_uninstall.m ']' + echo 'function on_uninstall (desc)' + echo ' error ('\''Can not uninstall %s installed by the redhat package manager'\'', desc.name);' + echo endfunction + '[' -e '/builddir/build/BUILD/iso2mesh-1.9.1/build/iso2mesh-1.9.1/*.metainfo.xml' ']' + echo 'Did not find a .metainfo.xml appdata file' Did not find a .metainfo.xml appdata file + install -m 0755 -vd /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh install: creating directory '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec' install: creating directory '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh' + install -m 0755 -vp bin/README.txt bin/cgalmesh bin/cgalpoly bin/cgalsimp2 bin/cgalsurf bin/cork bin/jmeshlib bin/meshfix bin/tetgen bin/tetgen1.5 /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/ 'bin/README.txt' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/README.txt' 'bin/cgalmesh' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalmesh' 'bin/cgalpoly' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalpoly' 'bin/cgalsimp2' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalsimp2' 'bin/cgalsurf' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalsurf' 'bin/cork' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cork' 'bin/jmeshlib' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/jmeshlib' 'bin/meshfix' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/meshfix' 'bin/tetgen' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen' 'bin/tetgen1.5' -> '/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen1.5' + /usr/lib/rpm/find-debuginfo.sh -j6 --strict-build-id -m -i --build-id-seed 1.9.1-3.fc29 --unique-debug-suffix -1.9.1-3.fc29.i386 --unique-debug-src-base octave-iso2mesh-1.9.1-3.fc29.i386 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/iso2mesh-1.9.1 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalmesh explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalsimp2 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/meshfix explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalsurf explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalpoly extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalsurf extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/meshfix extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalmesh extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalpoly extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cgalsimp2 gdb-add-index: No index was created for /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen gdb-add-index: [Was there no debuginfo? Was there already an index?] explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/jmeshlib extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/jmeshlib explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cork extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cork explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen1.5 extracting debug info from /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen1.5 gdb-add-index: No index was created for /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/cork gdb-add-index: [Was there no debuginfo? Was there already an index?] gdb-add-index: No index was created for /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen1.5 gdb-add-index: [Was there no debuginfo? Was there already an index?] /usr/lib/rpm/sepdebugcrcfix: Updated 6 CRC32s, 3 CRC32s did match. 1602 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/share/octave/packages/iso2mesh-1.9.1/doc/gendoc.sh from /bin/sh to #!/usr/bin/sh *** WARNING: ./usr/share/octave/packages/iso2mesh-1.9.1/nodevolume.m is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/share/octave/packages/iso2mesh-1.9.1/innersurf.m is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/share/octave/packages/iso2mesh-1.9.1/insurface.m is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/share/octave/packages/iso2mesh-1.9.1/fillsurf.m is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/share/octave/packages/iso2mesh-1.9.1/surfvolume.m is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/share/octave/packages/iso2mesh-1.9.1/outersurf.m is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/share/octave/packages/iso2mesh-1.9.1/elemvolume.m is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/src/debug/octave-iso2mesh-1.9.1-3.fc29.i386/tools/meshfix/include/simplification.h is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/src/debug/octave-iso2mesh-1.9.1-3.fc29.i386/tools/meshfix/include/epsilonSampling.h is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/src/debug/octave-iso2mesh-1.9.1-3.fc29.i386/tools/meshfix/src/epsilonSampling.cpp is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/src/debug/octave-iso2mesh-1.9.1-3.fc29.i386/tools/meshfix/src/uniform.cpp is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/src/debug/octave-iso2mesh-1.9.1-3.fc29.i386/tools/meshfix/src/cleaning.cpp is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/src/debug/octave-iso2mesh-1.9.1-3.fc29.i386/tools/meshfix/src/smoothing.cpp is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/src/debug/octave-iso2mesh-1.9.1-3.fc29.i386/tools/meshfix/src/simplification.cpp is executable but has empty or no shebang, removing executable bit *** WARNING: ./usr/libexec/iso2mesh/README.txt is executable but has empty or no shebang, removing executable bit Processing files: octave-iso2mesh-1.9.1-3.fc29.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.ZXXxuZ + umask 022 + cd /builddir/build/BUILD + cd iso2mesh-1.9.1 + DOCDIR=/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/octave-iso2mesh + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/octave-iso2mesh + cp -pr README.txt /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/octave-iso2mesh + cp -pr Content.txt /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/octave-iso2mesh + cp -pr AUTHORS.txt /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/octave-iso2mesh + cp -pr ChangeLog.txt /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/octave-iso2mesh + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.AyHC2H + umask 022 + cd /builddir/build/BUILD + cd iso2mesh-1.9.1 + LICENSEDIR=/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/licenses/octave-iso2mesh + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/licenses/octave-iso2mesh + cp -pr COPYING.txt /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/licenses/octave-iso2mesh + exit 0 warning: Duplicate build-ids /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen and /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/libexec/iso2mesh/tetgen1.5 Provides: octave-iso2mesh = 1.9.1-3.fc29 octave-iso2mesh(x86-32) = 1.9.1-3.fc29 Requires(interp): /bin/sh /bin/sh /bin/sh Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /bin/sh octave Requires(preun): /bin/sh Requires(postun): /bin/sh octave Requires: /usr/bin/sh libCGAL.so.13 libCGAL_ImageIO.so.13 libblas.so.3 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libgcc_s.so.1(GLIBC_2.0) libgmp.so.10 libgmpxx.so.4 libm.so.6 libm.so.6(GLIBC_2.0) libm.so.6(GLIBC_2.1) libmpfr.so.4 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.7) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.14) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.22) libstdc++.so.6(GLIBCXX_3.4.9) libsuperlu.so.5.2 libz.so.1 rtld(GNU_HASH) Processing files: iso2mesh-demos-1.9.1-3.fc29.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Sw7BNu + umask 022 + cd /builddir/build/BUILD + cd iso2mesh-1.9.1 + DOCDIR=/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/iso2mesh-demos + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/iso2mesh-demos + cp -pr sample /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/doc/iso2mesh-demos + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.U4FHAh + umask 022 + cd /builddir/build/BUILD + cd iso2mesh-1.9.1 + LICENSEDIR=/builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/licenses/iso2mesh-demos + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/licenses/iso2mesh-demos + cp -pr COPYING.txt /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/share/licenses/iso2mesh-demos + exit 0 Provides: iso2mesh-demos = 1.9.1-3.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: iso2mesh-demos Processing files: octave-iso2mesh-debugsource-1.9.1-3.fc29.i686 Provides: octave-iso2mesh-debugsource = 1.9.1-3.fc29 octave-iso2mesh-debugsource(x86-32) = 1.9.1-3.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: octave-iso2mesh-debuginfo-1.9.1-3.fc29.i686 warning: Duplicate build-ids /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/lib/debug/usr/libexec/iso2mesh/tetgen-1.9.1-3.fc29.i386.debug and /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386/usr/lib/debug/usr/libexec/iso2mesh/tetgen1.5-1.9.1-3.fc29.i386.debug Provides: debuginfo(build-id) = 7118f1c5cd80f27785cc3fbe455b713f4b5a11ea debuginfo(build-id) = 750922861aab0fe140c25f12f51043c0053b9f61 debuginfo(build-id) = 933151b96b67e02fe2df8c9a8ae608b79829d1b7 debuginfo(build-id) = 93b2b62e1004d0d04946c3d987fb7712592e4b6a debuginfo(build-id) = b4a64286b2231e4ef3bbdbe6782aeb5287b6e06f debuginfo(build-id) = cd827becfd2d568910ebc9b3c17a419ea18fda8a debuginfo(build-id) = d26b86e9bff038f1c3bf288643d3a2a441b59685 debuginfo(build-id) = e1530aeb0f14b9afdf043c811509b9e30552dfb4 octave-iso2mesh-debuginfo = 1.9.1-3.fc29 octave-iso2mesh-debuginfo(x86-32) = 1.9.1-3.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: octave-iso2mesh-debugsource(x86-32) = 1.9.1-3.fc29 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386 Wrote: /builddir/build/RPMS/octave-iso2mesh-1.9.1-3.fc29.i686.rpm Wrote: /builddir/build/RPMS/iso2mesh-demos-1.9.1-3.fc29.noarch.rpm Wrote: /builddir/build/RPMS/octave-iso2mesh-debugsource-1.9.1-3.fc29.i686.rpm Wrote: /builddir/build/RPMS/octave-iso2mesh-debuginfo-1.9.1-3.fc29.i686.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.jJB4gJ + umask 022 + cd /builddir/build/BUILD + cd iso2mesh-1.9.1 + /usr/bin/rm -rf /builddir/build/BUILDROOT/octave-iso2mesh-1.9.1-3.fc29.i386 + exit 0 Child return code was: 0