Mock Version: 1.4.19 Mock Version: 1.4.19 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64le --nodeps /builddir/build/SPECS/R-quadprog.spec'], chrootPath='/var/lib/mock/f29-build-18271776-1303279/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64le --nodeps /builddir/build/SPECS/R-quadprog.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: ppc64le Building for target ppc64le Wrote: /builddir/build/SRPMS/R-quadprog-1.5.8-1.fc29.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64le --nodeps /builddir/build/SPECS/R-quadprog.spec'], chrootPath='/var/lib/mock/f29-build-18271776-1303279/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64le --nodeps /builddir/build/SPECS/R-quadprog.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: ppc64le Building for target ppc64le Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.nhsvpg + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf quadprog + /usr/bin/mkdir -p quadprog + cd quadprog + /usr/bin/gzip -dc /builddir/build/SOURCES/quadprog_1.5-8.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + pushd quadprog ~/build/BUILD/quadprog/quadprog ~/build/BUILD/quadprog Patch #1 (Fix-FSF-address.patch): + echo 'Patch #1 (Fix-FSF-address.patch):' + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file src/aind.f patching file src/solve.QP.compact.f patching file src/solve.QP.f + popd ~/build/BUILD/quadprog + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.2KB3zh + umask 022 + cd /builddir/build/BUILD + cd quadprog + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.AdLGKi + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le ++ dirname /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le + cd quadprog + mkdir -p /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/lib64/R/library quadprog * installing *source* package 'quadprog' ... files 'src/aind.f', 'src/solve.QP.compact.f', 'src/solve.QP.f' have the wrong MD5 checksums ** using staged installation ** libs gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fvisibility=hidden -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -c aind.f -o aind.o gcc -m64 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c init.c -o init.o gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fvisibility=hidden -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -c solve.QP.compact.f -o solve.QP.compact.o solve.QP.compact.f:254:3: 72 if (nvl .EQ. 0) then 1 Warning: Label 72 at (1) defined but not used [-Wunused-label] solve.QP.compact.f:302:2: 7 t1inf = .FALSE. 1 Warning: Label 7 at (1) defined but not used [-Wunused-label] solve.QP.compact.f:94:0: * info, q, fdamat, iamat(fdamat+1,*), iact(*), iter(*), it1, Warning: 'it1' may be used uninitialized in this function [-Wmaybe-uninitialized] gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fvisibility=hidden -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -c solve.QP.f -o solve.QP.o solve.QP.f:245:3: 72 if (nvl .EQ. 0) then 1 Warning: Label 72 at (1) defined but not used [-Wunused-label] solve.QP.f:293:2: 7 t1inf = .FALSE. 1 Warning: Label 7 at (1) defined but not used [-Wunused-label] gfortran -m64 -fno-optimize-sibling-calls -fvisibility=hidden -fvisibility=hidden -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -c util.f -o util.o gcc -m64 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o quadprog.so aind.o init.o solve.QP.compact.o solve.QP.o util.o -L/usr/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/lib64/R/library/00LOCK-quadprog/00new/quadprog/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'quadprog' finding HTML links ... done solve.QP html solve.QP.compact html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (quadprog) + test -d quadprog/src + cd quadprog/src + rm -f aind.o init.o solve.QP.compact.o solve.QP.o util.o quadprog.so + rm -f /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/lib64/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 1.5.8-1.fc29 --unique-debug-suffix -1.5.8-1.fc29.ppc64le --unique-debug-src-base R-quadprog-1.5.8-1.fc29.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/quadprog explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/lib64/R/library/quadprog/libs/quadprog.so extracting debug info from /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/lib64/R/library/quadprog/libs/quadprog.so /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 87 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.qweyzl + umask 022 + cd /builddir/build/BUILD + cd quadprog + /usr/bin/R CMD check quadprog * using log directory '/builddir/build/BUILD/quadprog/quadprog.Rcheck' * using R version 3.6.1 (2019-07-05) * using platform: powerpc64le-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'quadprog/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'quadprog' version '1.5-8' * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.9/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.9/bioc/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.9/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.9/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.9/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.9/data/experiment/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'quadprog' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'Gwen.R' Comparing 'Gwen.Rout' to 'Gwen.Rout.save' ... OK Running 'TalbotKatz.R' Comparing 'TalbotKatz.Rout' to 'TalbotKatz.Rout.save' ... OK Running 'test1.R' Comparing 'test1.Rout' to 'test1.Rout.save' ... OK Running 'test2.R' Comparing 'test2.Rout' to 'test2.Rout.save' ... OK OK * checking PDF version of manual ... OK * DONE Status: OK + exit 0 Processing files: R-quadprog-1.5.8-1.fc29.ppc64le Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.9MDuFw + umask 022 + cd /builddir/build/BUILD + cd quadprog + DOCDIR=/builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/share/doc/R-quadprog + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/share/doc/R-quadprog + cp -pr quadprog/ChangeLog /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/share/doc/R-quadprog + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.x9rCLH + umask 022 + cd /builddir/build/BUILD + cd quadprog + LICENSEDIR=/builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/share/licenses/R-quadprog + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/share/licenses/R-quadprog + cp -pr quadprog/GPL-2 quadprog/GPL-3 /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le/usr/share/licenses/R-quadprog + exit 0 Provides: R-quadprog = 1.5.8-1.fc29 R-quadprog(ppc-64) = 1.5.8-1.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libR.so()(64bit) libRblas.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgfortran.so.5()(64bit) libm.so.6()(64bit) libquadmath.so.0()(64bit) rtld(GNU_HASH) Processing files: R-quadprog-debugsource-1.5.8-1.fc29.ppc64le Provides: R-quadprog-debugsource = 1.5.8-1.fc29 R-quadprog-debugsource(ppc-64) = 1.5.8-1.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-quadprog-debuginfo-1.5.8-1.fc29.ppc64le Provides: R-quadprog-debuginfo = 1.5.8-1.fc29 R-quadprog-debuginfo(ppc-64) = 1.5.8-1.fc29 debuginfo(build-id) = 9609796166e25220c61dc0e6153ae59d76f85eb2 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-quadprog-debugsource(ppc-64) = 1.5.8-1.fc29 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le Wrote: /builddir/build/RPMS/R-quadprog-1.5.8-1.fc29.ppc64le.rpm Wrote: /builddir/build/RPMS/R-quadprog-debugsource-1.5.8-1.fc29.ppc64le.rpm Wrote: /builddir/build/RPMS/R-quadprog-debuginfo-1.5.8-1.fc29.ppc64le.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.MF9v6S + umask 022 + cd /builddir/build/BUILD + cd quadprog + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-quadprog-1.5.8-1.fc29.ppc64le + exit 0 Child return code was: 0