Mock Version: 1.3.4 Mock Version: 1.3.4 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/libneurosim.spec'], chrootPath='/var/lib/mock/f28-build-14149599-1015851/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]printOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/libneurosim.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/libneurosim-0-2.20181028.git7d074da.fc28.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/libneurosim.spec'], chrootPath='/var/lib/mock/f28-build-14149599-1015851/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]printOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/libneurosim.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.zfXoak + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + /usr/bin/mkdir -p libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + cd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + /usr/bin/gzip -dc /builddir/build/SOURCES/libneurosim-7d074da.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + cp -v libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/COPYING . 'libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/COPYING' -> './COPYING' + cp -v libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/README.md . 'libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/README.md' -> './README.md' + cp -a libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2 + cp -a libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2 libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2 + cp -a libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich + cp -a libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2 libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2 + cp -a libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ubwo8K + umask 022 + cd /builddir/build/BUILD + cd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + MPI_COMPILE_TYPE= ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + PYTHON_VERSION=3 + MPI_YES=no + MPI_HOME=/usr + MPI_LIB=/usr/lib64 + MPI_INCLUDE=/usr/include + MPI_BIN=/usr/bin + MPI_MAN=/usr/share/man + pushd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + ./autogen.sh aclocal -I /usr/share/aclocal libtoolize --force --copy --automake --ltdl autoheader autoconf automake --foreign --copy --add-missing Now run configure and make. + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + ./configure --disable-static --disable-silent-rules --with-python=3 --with-mpi=no --prefix=/usr --libdir=/usr/lib64 --includedir=/usr/include --bindir=/usr/bin --mandir=/usr/share/man checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether we are configuring for Blue Gene... no checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking for a Python interpreter with version >= "3"... python3 checking for python3... /usr/bin/python3 checking for python3 version... 3.6 checking for python3 platform... linux checking for python3 script directory... ${prefix}/lib/python3.6/site-packages checking for python3 extension module directory... ${exec_prefix}/lib64/python3.6/site-packages Platform: Compiler : g++ Using AM_CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: Compiler : g++ Using AM_CXXFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libneurosim/Makefile config.status: creating libneurosim/version.h config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' '--disable-static' '--disable-silent-rules' '--with-python=3' '--with-mpi=no' '--libdir=/usr/lib64' '--includedir=/usr/include' '--bindir=/usr/bin' '--mandir=/usr/share/man' 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j6 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/missing aclocal-1.15 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/missing automake-1.15 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr --disable-static --disable-silent-rules --with-python=3 --with-mpi=no --libdir=/usr/lib64 --includedir=/usr/include --bindir=/usr/bin --mandir=/usr/share/man CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' Making all in libneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' depbase=`echo conngen/connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o conngen/connection_generator.lo conngen/connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF conngen/.deps/connection_generator.Tpo -c conngen/connection_generator.cpp -fPIC -DPIC -o conngen/.libs/connection_generator.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' /bin/sh ../libtool --tag=CXX --mode=link g++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64 conngen/connection_generator.lo version.lo ../libltdl/libltdlc.la libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o conngen/.libs/connection_generator.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.6m -I./../libneurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c -o libpy3neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.6m -I./../libneurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy3neurosim_la-pyneurosim.o mv -f .deps/libpy3neurosim_la-pyneurosim.Tpo .deps/libpy3neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link g++ -I/usr/include/python3.6m -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/python3.6/site-packages libpy3neurosim_la-pyneurosim.lo libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim/.libs ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so -o .libs/libpy3neurosim.so libtool: link: ( cd ".libs" && rm -f "libpy3neurosim.la" && ln -s "../libpy3neurosim.la" "libpy3neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim' + popd ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + MPI_COMPILE_TYPE=-py2 + PYTHON_VERSION=2 + MPI_YES=no + MPI_HOME=/usr + MPI_LIB=/usr/lib64 + MPI_INCLUDE=/usr/include + MPI_BIN=/usr/bin + MPI_MAN=/usr/share/man + pushd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2 ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2 ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + ./autogen.sh aclocal -I /usr/share/aclocal libtoolize --force --copy --automake --ltdl autoheader autoconf automake --foreign --copy --add-missing Now run configure and make. + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + ./configure --disable-static --disable-silent-rules --with-python=2 --with-mpi=no --prefix=/usr --libdir=/usr/lib64 --includedir=/usr/include --bindir=/usr/bin --mandir=/usr/share/man checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether we are configuring for Blue Gene... no checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking for a Python interpreter with version >= "2"... python checking for python... /usr/bin/python checking for python version... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out 2.7 checking for python platform... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out linux2 checking for python script directory... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out ${prefix}/lib/python2.7/site-packages checking for python extension module directory... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out ${exec_prefix}/lib64/python2.7/site-packages DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out Platform: Compiler : g++ Using AM_CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: Compiler : g++ Using AM_CXXFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libneurosim/Makefile config.status: creating libneurosim/version.h config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' '--disable-static' '--disable-silent-rules' '--with-python=2' '--with-mpi=no' '--libdir=/usr/lib64' '--includedir=/usr/include' '--bindir=/usr/bin' '--mandir=/usr/share/man' 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j6 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/missing aclocal-1.15 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/missing automake-1.15 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr --disable-static --disable-silent-rules --with-python=2 --with-mpi=no --libdir=/usr/lib64 --includedir=/usr/include --bindir=/usr/bin --mandir=/usr/share/man CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' Making all in libneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' depbase=`echo conngen/connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o conngen/connection_generator.lo conngen/connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF conngen/.deps/connection_generator.Tpo -c conngen/connection_generator.cpp -fPIC -DPIC -o conngen/.libs/connection_generator.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' /bin/sh ../libtool --tag=CXX --mode=link g++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64 conngen/connection_generator.lo version.lo ../libltdl/libltdlc.la libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o conngen/.libs/connection_generator.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpy2neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy2neurosim_la-pyneurosim.Tpo -c -o libpy2neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpy2neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy2neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy2neurosim_la-pyneurosim.o mv -f .deps/libpy2neurosim_la-pyneurosim.Tpo .deps/libpy2neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpyneurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpyneurosim_la-pyneurosim.Tpo -c -o libpyneurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpyneurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpyneurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpyneurosim_la-pyneurosim.o mv -f .deps/libpyneurosim_la-pyneurosim.Tpo .deps/libpyneurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link g++ -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpyneurosim.la -rpath /usr/lib64/python2.7/site-packages libpyneurosim_la-pyneurosim.lo libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpyneurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim/.libs ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpyneurosim.so -o .libs/libpyneurosim.so libtool: link: ( cd ".libs" && rm -f "libpyneurosim.la" && ln -s "../libpyneurosim.la" "libpyneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link g++ -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy2neurosim.la -rpath /usr/lib64/python2.7/site-packages libpy2neurosim_la-pyneurosim.lo libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy2neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim/.libs ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy2neurosim.so -o .libs/libpy2neurosim.so libtool: link: ( cd ".libs" && rm -f "libpy2neurosim.la" && ln -s "../libpy2neurosim.la" "libpy2neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' + popd ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + . /etc/profile.d/modules.sh ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 8551 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + MPI_COMPILE_TYPE=-mpich + PYTHON_VERSION=3 + MPI_YES=yes + pushd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich + ./autogen.sh aclocal -I /usr/share/aclocal libtoolize --force --copy --automake --ltdl autoheader autoconf automake --foreign --copy --add-missing Now run configure and make. + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + ./configure --disable-static --disable-silent-rules --with-python=3 --with-mpi=yes --prefix=/usr/lib64/mpich --libdir=/usr/lib64/mpich/lib --includedir=/usr/include/mpich-x86_64 --bindir=/usr/lib64/mpich/bin --mandir=/usr/share/man/mpich-x86_64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether we are configuring for Blue Gene... no checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for mpicxx... mpicxx checking whether we are using the GNU C++ compiler... yes checking whether mpicxx accepts -g... yes checking dependency style of mpicxx... gcc3 checking for a Python interpreter with version >= "3"... python3 checking for python3... /usr/bin/python3 checking for python3 version... 3.6 checking for python3 platform... linux checking for python3 script directory... ${prefix}/lib/python3.6/site-packages checking for python3 extension module directory... ${exec_prefix}/lib64/python3.6/site-packages Platform: Compiler : g++ Using AM_CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: Compiler : g++ Using AM_CXXFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... no checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether mpicxx links MPI programs out of the box... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libneurosim/Makefile config.status: creating libneurosim/version.h config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/lib64/mpich' '--disable-static' '--disable-silent-rules' '--with-python=3' '--with-mpi=yes' '--libdir=/usr/lib64/mpich/lib' '--includedir=/usr/include/mpich-x86_64' '--bindir=/usr/lib64/mpich/bin' '--mandir=/usr/share/man/mpich-x86_64' 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j6 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/missing aclocal-1.15 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/missing automake-1.15 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr/lib64/mpich --disable-static --disable-silent-rules --with-python=3 --with-mpi=yes --libdir=/usr/lib64/mpich/lib --includedir=/usr/include/mpich-x86_64 --bindir=/usr/lib64/mpich/bin --mandir=/usr/share/man/mpich-x86_64 CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' Making all in libneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' depbase=`echo conngen/connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o conngen/connection_generator.lo conngen/connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF conngen/.deps/connection_generator.Tpo -c conngen/connection_generator.cpp -fPIC -DPIC -o conngen/.libs/connection_generator.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64/mpich/lib conngen/connection_generator.lo version.lo ../libltdl/libltdlc.la libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o conngen/.libs/connection_generator.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib64/mpich/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.6m -I./../libneurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c -o libpy3neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.6m -I./../libneurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy3neurosim_la-pyneurosim.o mv -f .deps/libpy3neurosim_la-pyneurosim.Tpo .deps/libpy3neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -I/usr/include/python3.6m -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/mpich/lib64/python3.6/site-packages libpy3neurosim_la-pyneurosim.lo libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim/.libs -Wl,-rpath -Wl,/usr/lib64/mpich/lib ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib64/mpich/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so -o .libs/libpy3neurosim.so libtool: link: ( cd ".libs" && rm -f "libpy3neurosim.la" && ln -s "../libpy3neurosim.la" "libpy3neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim' + popd ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + MPI_COMPILE_TYPE=-mpich-py2 + PYTHON_VERSION=2 + MPI_YES=yes + pushd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2 ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2 ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + ./autogen.sh aclocal -I /usr/share/aclocal libtoolize --force --copy --automake --ltdl autoheader autoconf automake --foreign --copy --add-missing Now run configure and make. + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + ./configure --disable-static --disable-silent-rules --with-python=2 --with-mpi=yes --prefix=/usr/lib64/mpich --libdir=/usr/lib64/mpich/lib --includedir=/usr/include/mpich-x86_64 --bindir=/usr/lib64/mpich/bin --mandir=/usr/share/man/mpich-x86_64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether we are configuring for Blue Gene... no checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for mpicxx... mpicxx checking whether we are using the GNU C++ compiler... yes checking whether mpicxx accepts -g... yes checking dependency style of mpicxx... gcc3 checking for a Python interpreter with version >= "2"... python checking for python... /usr/bin/python checking for python version... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out 2.7 checking for python platform... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out linux2 checking for python script directory... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out ${prefix}/lib/python2.7/site-packages checking for python extension module directory... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out ${exec_prefix}/lib64/python2.7/site-packages DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out Platform: Compiler : g++ Using AM_CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: Compiler : g++ Using AM_CXXFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... no checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether mpicxx links MPI programs out of the box... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libneurosim/Makefile config.status: creating libneurosim/version.h config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/lib64/mpich' '--disable-static' '--disable-silent-rules' '--with-python=2' '--with-mpi=yes' '--libdir=/usr/lib64/mpich/lib' '--includedir=/usr/include/mpich-x86_64' '--bindir=/usr/lib64/mpich/bin' '--mandir=/usr/share/man/mpich-x86_64' 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j6 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/missing aclocal-1.15 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/missing automake-1.15 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr/lib64/mpich --disable-static --disable-silent-rules --with-python=2 --with-mpi=yes --libdir=/usr/lib64/mpich/lib --includedir=/usr/include/mpich-x86_64 --bindir=/usr/lib64/mpich/bin --mandir=/usr/share/man/mpich-x86_64 CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' Making all in libneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' depbase=`echo conngen/connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o conngen/connection_generator.lo conngen/connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF conngen/.deps/connection_generator.Tpo -c conngen/connection_generator.cpp -fPIC -DPIC -o conngen/.libs/connection_generator.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64/mpich/lib conngen/connection_generator.lo version.lo ../libltdl/libltdlc.la libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o conngen/.libs/connection_generator.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib64/mpich/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpyneurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpyneurosim_la-pyneurosim.Tpo -c -o libpyneurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpyneurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpyneurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpyneurosim_la-pyneurosim.o mv -f .deps/libpyneurosim_la-pyneurosim.Tpo .deps/libpyneurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpy2neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy2neurosim_la-pyneurosim.Tpo -c -o libpy2neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpy2neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy2neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy2neurosim_la-pyneurosim.o mv -f .deps/libpy2neurosim_la-pyneurosim.Tpo .deps/libpy2neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpyneurosim.la -rpath /usr/lib64/mpich/lib64/python2.7/site-packages libpyneurosim_la-pyneurosim.lo libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpyneurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim/.libs -Wl,-rpath -Wl,/usr/lib64/mpich/lib ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib64/mpich/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpyneurosim.so -o .libs/libpyneurosim.so libtool: link: ( cd ".libs" && rm -f "libpyneurosim.la" && ln -s "../libpyneurosim.la" "libpyneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy2neurosim.la -rpath /usr/lib64/mpich/lib64/python2.7/site-packages libpy2neurosim_la-pyneurosim.lo libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy2neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim/.libs -Wl,-rpath -Wl,/usr/lib64/mpich/lib ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib64/mpich/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy2neurosim.so -o .libs/libpy2neurosim.so libtool: link: ( cd ".libs" && rm -f "libpy2neurosim.la" && ln -s "../libpy2neurosim.la" "libpy2neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' + popd ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + . /etc/profile.d/modules.sh ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 8551 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + . /etc/profile.d/modules.sh ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 8551 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + MPI_COMPILE_TYPE=-openmpi + PYTHON_VERSION=3 + MPI_YES=yes + pushd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + ./autogen.sh aclocal -I /usr/share/aclocal libtoolize --force --copy --automake --ltdl autoheader autoconf automake --foreign --copy --add-missing Now run configure and make. + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + ./configure --disable-static --disable-silent-rules --with-python=3 --with-mpi=yes --prefix=/usr/lib64/openmpi --libdir=/usr/lib64/openmpi/lib --includedir=/usr/include/openmpi-x86_64 --bindir=/usr/lib64/openmpi/bin --mandir=/usr/share/man/openmpi-x86_64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether we are configuring for Blue Gene... no checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for mpicxx... mpicxx checking whether we are using the GNU C++ compiler... yes checking whether mpicxx accepts -g... yes checking dependency style of mpicxx... gcc3 checking for a Python interpreter with version >= "3"... python3 checking for python3... /usr/bin/python3 checking for python3 version... 3.6 checking for python3 platform... linux checking for python3 script directory... ${prefix}/lib/python3.6/site-packages checking for python3 extension module directory... ${exec_prefix}/lib64/python3.6/site-packages Platform: Compiler : g++ Using AM_CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: Compiler : g++ Using AM_CXXFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... no checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether mpicxx links MPI programs out of the box... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libneurosim/Makefile config.status: creating libneurosim/version.h config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/lib64/openmpi' '--disable-static' '--disable-silent-rules' '--with-python=3' '--with-mpi=yes' '--libdir=/usr/lib64/openmpi/lib' '--includedir=/usr/include/openmpi-x86_64' '--bindir=/usr/lib64/openmpi/bin' '--mandir=/usr/share/man/openmpi-x86_64' 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j6 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/missing aclocal-1.15 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/missing automake-1.15 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr/lib64/openmpi --disable-static --disable-silent-rules --with-python=3 --with-mpi=yes --libdir=/usr/lib64/openmpi/lib --includedir=/usr/include/openmpi-x86_64 --bindir=/usr/lib64/openmpi/bin --mandir=/usr/share/man/openmpi-x86_64 CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' Making all in libneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' depbase=`echo conngen/connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o conngen/connection_generator.lo conngen/connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF conngen/.deps/connection_generator.Tpo -c conngen/connection_generator.cpp -fPIC -DPIC -o conngen/.libs/connection_generator.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64/openmpi/lib conngen/connection_generator.lo version.lo ../libltdl/libltdlc.la libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o conngen/.libs/connection_generator.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib64/openmpi/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.6m -I./../libneurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c -o libpy3neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.6m -I./../libneurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy3neurosim_la-pyneurosim.o mv -f .deps/libpy3neurosim_la-pyneurosim.Tpo .deps/libpy3neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -I/usr/include/python3.6m -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/openmpi/lib64/python3.6/site-packages libpy3neurosim_la-pyneurosim.lo libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim/.libs -Wl,-rpath -Wl,/usr/lib64/openmpi/lib ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib64/openmpi/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so -o .libs/libpy3neurosim.so libtool: link: ( cd ".libs" && rm -f "libpy3neurosim.la" && ln -s "../libpy3neurosim.la" "libpy3neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim' + popd ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + MPI_COMPILE_TYPE=-openmpi-py2 + PYTHON_VERSION=2 + MPI_YES=yes + pushd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2 ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2 ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + ./autogen.sh aclocal -I /usr/share/aclocal libtoolize --force --copy --automake --ltdl autoheader autoconf automake --foreign --copy --add-missing Now run configure and make. + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + ./configure --disable-static --disable-silent-rules --with-python=2 --with-mpi=yes --prefix=/usr/lib64/openmpi --libdir=/usr/lib64/openmpi/lib --includedir=/usr/include/openmpi-x86_64 --bindir=/usr/lib64/openmpi/bin --mandir=/usr/share/man/openmpi-x86_64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether we are configuring for Blue Gene... no checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for mpicxx... mpicxx checking whether we are using the GNU C++ compiler... yes checking whether mpicxx accepts -g... yes checking dependency style of mpicxx... gcc3 checking for a Python interpreter with version >= "2"... python checking for python... /usr/bin/python checking for python version... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out 2.7 checking for python platform... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out linux2 checking for python script directory... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out ${prefix}/lib/python2.7/site-packages checking for python extension module directory... DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out ${exec_prefix}/lib64/python2.7/site-packages DEPRECATION WARNING: python2 invoked with /usr/bin/python. Use /usr/bin/python3 or /usr/bin/python2 /usr/bin/python will be removed or switched to Python 3 in the future. If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out Platform: Compiler : g++ Using AM_CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: Compiler : g++ Using AM_CXXFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... no checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether mpicxx links MPI programs out of the box... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating libneurosim/Makefile config.status: creating libneurosim/version.h config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/lib64/openmpi' '--disable-static' '--disable-silent-rules' '--with-python=2' '--with-mpi=yes' '--libdir=/usr/lib64/openmpi/lib' '--includedir=/usr/include/openmpi-x86_64' '--bindir=/usr/lib64/openmpi/bin' '--mandir=/usr/share/man/openmpi-x86_64' 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j6 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/missing aclocal-1.15 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/missing automake-1.15 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr/lib64/openmpi --disable-static --disable-silent-rules --with-python=2 --with-mpi=yes --libdir=/usr/lib64/openmpi/lib --includedir=/usr/include/openmpi-x86_64 --bindir=/usr/lib64/openmpi/bin --mandir=/usr/share/man/openmpi-x86_64 CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /lib64 /usr/lib64 /lib /usr/lib checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' Making all in libneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' depbase=`echo conngen/connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o conngen/connection_generator.lo conngen/connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I../libltdl -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT conngen/connection_generator.lo -MD -MP -MF conngen/.deps/connection_generator.Tpo -c conngen/connection_generator.cpp -fPIC -DPIC -o conngen/.libs/connection_generator.o make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64/openmpi/lib conngen/connection_generator.lo version.lo ../libltdl/libltdlc.la libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o conngen/.libs/connection_generator.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib64/openmpi/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpyneurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpyneurosim_la-pyneurosim.Tpo -c -o libpyneurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpyneurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpyneurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpyneurosim_la-pyneurosim.o mv -f .deps/libpyneurosim_la-pyneurosim.Tpo .deps/libpyneurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpy2neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy2neurosim_la-pyneurosim.Tpo -c -o libpy2neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python2.7 -I./../libneurosim/conngen -MT libpy2neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy2neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy2neurosim_la-pyneurosim.o mv -f .deps/libpy2neurosim_la-pyneurosim.Tpo .deps/libpy2neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpyneurosim.la -rpath /usr/lib64/openmpi/lib64/python2.7/site-packages libpyneurosim_la-pyneurosim.lo libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpyneurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim/.libs -Wl,-rpath -Wl,/usr/lib64/openmpi/lib ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib64/openmpi/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpyneurosim.so -o .libs/libpyneurosim.so libtool: link: ( cd ".libs" && rm -f "libpyneurosim.la" && ln -s "../libpyneurosim.la" "libpyneurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy2neurosim.la -rpath /usr/lib64/openmpi/lib64/python2.7/site-packages libpy2neurosim_la-pyneurosim.lo libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy2neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim/.libs -Wl,-rpath -Wl,/usr/lib64/openmpi/lib ../libneurosim/.libs/libneurosim.so -ldl -L/usr/lib64/openmpi/lib -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy2neurosim.so -o .libs/libpy2neurosim.so libtool: link: ( cd ".libs" && rm -f "libpy2neurosim.la" && ln -s "../libpy2neurosim.la" "libpy2neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' + popd ~/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + . /etc/profile.d/modules.sh ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 8551 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.n3uoy6 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 ++ dirname /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 + cd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + MPI_COMPILE_TYPE= + PYTHON_VERSION=3 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f STRIP=/bin/true make: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f' Making install in libltdl make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libltdl' Making install in libneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64 && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64 && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' /usr/bin/install -p -m 644 conngen/connection_generator.h version.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy3neurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages' libtool: warning: relinking 'libpy3neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libtool" --tag CXX --mode=relink g++ -I/usr/include/python3.6m -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/python3.6/site-packages libpy3neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64 -L/usr/lib64 -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so -o .libs/libpy3neurosim.so libtool: install: /usr/bin/install -p .libs/libpy3neurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages/libpy3neurosim.so libtool: install: /usr/bin/install -p .libs/libpy3neurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages/libpy3neurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/python3.6/site-packages' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f' make: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f' + MPI_COMPILE_TYPE=-py2 + PYTHON_VERSION=2 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2 STRIP=/bin/true make: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2' Making install in libltdl make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl' Making install in libneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64 && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64 && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' /usr/bin/install -p -m 644 conngen/connection_generator.h version.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libneurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy2neurosim.la libpyneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages' libtool: warning: relinking 'libpy2neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libtool" --tag CXX --mode=relink g++ -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy2neurosim.la -rpath /usr/lib64/python2.7/site-packages libpy2neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy2neurosim_la-pyneurosim.o -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64 -L/usr/lib64 -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy2neurosim.so -o .libs/libpy2neurosim.so libtool: install: /usr/bin/install -p .libs/libpy2neurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/libpy2neurosim.so libtool: install: /usr/bin/install -p .libs/libpy2neurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/libpy2neurosim.la libtool: warning: relinking 'libpyneurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libtool" --tag CXX --mode=relink g++ -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpyneurosim.la -rpath /usr/lib64/python2.7/site-packages libpyneurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpyneurosim_la-pyneurosim.o -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64 -L/usr/lib64 -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpyneurosim.so -o .libs/libpyneurosim.so libtool: install: /usr/bin/install -p .libs/libpyneurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/libpyneurosim.so libtool: install: /usr/bin/install -p .libs/libpyneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/libpyneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/python2.7/site-packages' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2' make: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2' + . /etc/profile.d/modules.sh ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 30028 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/etc/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS= -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS=' -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + MPI_TYPE=mpich + MPI_COMPILE_TYPE=-mpich + PYTHON_VERSION=3 + PY_VERSION=3.6 + PYTHON_LOC=/usr/lib64/python3.6/site-packages/mpich + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich STRIP=/bin/true make: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich' Making install in libltdl make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libltdl' Making install in libneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/mpich/lib' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' /usr/bin/install -p -m 644 conngen/connection_generator.h version.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libneurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python3.6/site-packages' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy3neurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python3.6/site-packages' libtool: warning: relinking 'libpy3neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libtool" --tag CXX --mode=relink mpicxx -I/usr/include/python3.6m -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/mpich/lib64/python3.6/site-packages libpy3neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/usr/lib64/mpich/lib -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib -L/usr/lib64/mpich/lib -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so -o .libs/libpy3neurosim.so libtool: install: /usr/bin/install -p .libs/libpy3neurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python3.6/site-packages/libpy3neurosim.so libtool: install: /usr/bin/install -p .libs/libpy3neurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python3.6/site-packages/libpy3neurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/mpich/lib64/python3.6/site-packages' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich' make: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich' + mkdir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python3.6/site-packages/mpich -v mkdir: created directory '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python3.6/site-packages/mpich' + mv /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/mpich/lib64/python3.6/site-packages/libpy3neurosim.so /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python3.6/site-packages/mpich/ -v renamed '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/mpich/lib64/python3.6/site-packages/libpy3neurosim.so' -> '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python3.6/site-packages/mpich/libpy3neurosim.so' + MPI_COMPILE_TYPE=-mpich-py2 + PYTHON_VERSION=2 + PY_VERSION=2.7 + PYTHON_LOC=/usr/lib64/python2.7/site-packages/mpich + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2 STRIP=/bin/true make: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2' Making install in libltdl make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl' Making install in libneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/mpich/lib' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' /usr/bin/install -p -m 644 conngen/connection_generator.h version.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libneurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python2.7/site-packages' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy2neurosim.la libpyneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python2.7/site-packages' libtool: warning: relinking 'libpy2neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libtool" --tag CXX --mode=relink mpicxx -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy2neurosim.la -rpath /usr/lib64/mpich/lib64/python2.7/site-packages libpy2neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy2neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/usr/lib64/mpich/lib -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib -L/usr/lib64/mpich/lib -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy2neurosim.so -o .libs/libpy2neurosim.so libtool: install: /usr/bin/install -p .libs/libpy2neurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python2.7/site-packages/libpy2neurosim.so libtool: install: /usr/bin/install -p .libs/libpy2neurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python2.7/site-packages/libpy2neurosim.la libtool: warning: relinking 'libpyneurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libtool" --tag CXX --mode=relink mpicxx -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpyneurosim.la -rpath /usr/lib64/mpich/lib64/python2.7/site-packages libpyneurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpyneurosim_la-pyneurosim.o -Wl,-rpath -Wl,/usr/lib64/mpich/lib -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib -L/usr/lib64/mpich/lib -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpyneurosim.so -o .libs/libpyneurosim.so libtool: install: /usr/bin/install -p .libs/libpyneurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python2.7/site-packages/libpyneurosim.so libtool: install: /usr/bin/install -p .libs/libpyneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib64/python2.7/site-packages/libpyneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/mpich/lib64/python2.7/site-packages' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/mpich-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2' make: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2' + mkdir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/mpich -v mkdir: created directory '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/mpich' + mv /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/mpich/lib64/python2.7/site-packages/libpy2neurosim.so /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/mpich/lib64/python2.7/site-packages/libpyneurosim.so /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/mpich/ -v renamed '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/mpich/lib64/python2.7/site-packages/libpy2neurosim.so' -> '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/mpich/libpy2neurosim.so' renamed '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/mpich/lib64/python2.7/site-packages/libpyneurosim.so' -> '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/mpich/libpyneurosim.so' + . /etc/profile.d/modules.sh ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 30028 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPWZhbHNlLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXt9LG1wYXRoQT17Ii9ldGMvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzIiwiL3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eCIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsIi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL2V0Yy9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvTGludXg6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hh ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + . /etc/profile.d/modules.sh ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 30028 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + MPI_TYPE=openmpi + MPI_COMPILE_TYPE=-openmpi + PYTHON_VERSION=3 + PY_VERSION=3.6 + PYTHON_LOC=/usr/lib64/python3.6/site-packages/openmpi + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi STRIP=/bin/true make: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi' Making install in libltdl make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libltdl' Making install in libneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/openmpi/lib' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' /usr/bin/install -p -m 644 conngen/connection_generator.h version.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libneurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python3.6/site-packages' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy3neurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python3.6/site-packages' libtool: warning: relinking 'libpy3neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libtool" --tag CXX --mode=relink mpicxx -I/usr/include/python3.6m -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/openmpi/lib64/python3.6/site-packages libpy3neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so -o .libs/libpy3neurosim.so libtool: install: /usr/bin/install -p .libs/libpy3neurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python3.6/site-packages/libpy3neurosim.so libtool: install: /usr/bin/install -p .libs/libpy3neurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python3.6/site-packages/libpy3neurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/openmpi/lib64/python3.6/site-packages' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi' make: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi' + mkdir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python3.6/site-packages/openmpi -v mkdir: created directory '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python3.6/site-packages/openmpi' + mv /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/openmpi/lib64/python3.6/site-packages/libpy3neurosim.so /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python3.6/site-packages/openmpi/ -v renamed '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/openmpi/lib64/python3.6/site-packages/libpy3neurosim.so' -> '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python3.6/site-packages/openmpi/libpy3neurosim.so' + MPI_COMPILE_TYPE=-openmpi-py2 + PYTHON_VERSION=2 + PY_VERSION=2.7 + PYTHON_LOC=/usr/lib64/python2.7/site-packages/openmpi + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2 STRIP=/bin/true make: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2' Making install in libltdl make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl' Making install in libneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/openmpi/lib' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' /usr/bin/install -p -m 644 conngen/connection_generator.h version.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libneurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python2.7/site-packages' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy2neurosim.la libpyneurosim.la '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python2.7/site-packages' libtool: warning: relinking 'libpy2neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libtool" --tag CXX --mode=relink mpicxx -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpy2neurosim.la -rpath /usr/lib64/openmpi/lib64/python2.7/site-packages libpy2neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpy2neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy2neurosim.so -o .libs/libpy2neurosim.so libtool: install: /usr/bin/install -p .libs/libpy2neurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python2.7/site-packages/libpy2neurosim.so libtool: install: /usr/bin/install -p .libs/libpy2neurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python2.7/site-packages/libpy2neurosim.la libtool: warning: relinking 'libpyneurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libtool" --tag CXX --mode=relink mpicxx -I/usr/include/python2.7 -I./../libneurosim/conngen -avoid-version -module ../libneurosim/libneurosim.la -o libpyneurosim.la -rpath /usr/lib64/openmpi/lib64/python2.7/site-packages libpyneurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64) libtool: relink: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbeginS.o .libs/libpyneurosim_la-pyneurosim.o -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -L/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/8/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o -Wl,-soname -Wl,libpyneurosim.so -o .libs/libpyneurosim.so libtool: install: /usr/bin/install -p .libs/libpyneurosim.soT /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python2.7/site-packages/libpyneurosim.so libtool: install: /usr/bin/install -p .libs/libpyneurosim.lai /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib64/python2.7/site-packages/libpyneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/openmpi/lib64/python2.7/site-packages' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/include/openmpi-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2' make: Leaving directory '/builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2' + mkdir /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/openmpi -v mkdir: created directory '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/openmpi' + mv /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/openmpi/lib64/python2.7/site-packages/libpy2neurosim.so /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/openmpi/lib64/python2.7/site-packages/libpyneurosim.so /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/openmpi/ -v renamed '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/openmpi/lib64/python2.7/site-packages/libpy2neurosim.so' -> '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/openmpi/libpy2neurosim.so' renamed '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/openmpi/lib64/python2.7/site-packages/libpyneurosim.so' -> '/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64//usr/lib64/python2.7/site-packages/openmpi/libpyneurosim.so' + . /etc/profile.d/modules.sh ++ '[' -z '' ']' ++ '[' -z /usr/share/modulefiles ']' ++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' +++ /usr/bin/ps -p 30028 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + find /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 -name '*.la' -exec rm -f '{}' ';' + /usr/lib/rpm/find-debuginfo.sh -j6 --strict-build-id -m -i --build-id-seed 0-2.20181028.git7d074da.fc28 --unique-debug-suffix -0-2.20181028.git7d074da.fc28.x86_64 --unique-debug-src-base libneurosim-0-2.20181028.git7d074da.fc28.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages/libpy3neurosim.so extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/openmpi/lib/libneurosim.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages/openmpi/libpy3neurosim.so extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages/mpich/libpy3neurosim.so extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/openmpi/libpy2neurosim.so extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/libpy2neurosim.so gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages/mpich/libpy3neurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/libpy2neurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages/openmpi/libpy3neurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/openmpi/libpy2neurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6/site-packages/libpy3neurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/openmpi/libpyneurosim.so extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/libpyneurosim.so extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/mpich/libpy2neurosim.so extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/mpich/libpyneurosim.so extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/libneurosim.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/mpich/lib/libneurosim.so.0.0.0 gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/openmpi/libpyneurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/libpyneurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/mpich/libpyneurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7/site-packages/mpich/libpy2neurosim.so gdb-add-index: [Was there no debuginfo? Was there already an index?] /usr/lib/rpm/sepdebugcrcfix: Updated 3 CRC32s, 9 CRC32s did match. cpio: libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-mpich-py2/libltdl/.libs/libltdlcS.c: Cannot stat: No such file or directory cpio: libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-openmpi-py2/libltdl/.libs/libltdlcS.c: Cannot stat: No such file or directory cpio: libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f-py2/libltdl/.libs/libltdlcS.c: Cannot stat: No such file or directory 782 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 Bytecompiling .py files below /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib/debug/usr/lib64/python3.6 using /usr/bin/python3.6 Bytecompiling .py files below /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib/debug/usr/lib64/python2.7 using /usr/bin/python2.7 Bytecompiling .py files below /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python3.6 using /usr/bin/python3.6 Bytecompiling .py files below /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/lib64/python2.7 using /usr/bin/python2.7 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs '' '' /usr/share/lmod/lmod/init/bash: line 15: __lmod_vx: unbound variable Processing files: libneurosim-0-2.20181028.git7d074da.fc28.x86_64 Provides: libneurosim = 0-2.20181028.git7d074da.fc28 libneurosim(x86-64) = 0-2.20181028.git7d074da.fc28 libneurosim.so.0()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libneurosim-devel-0-2.20181028.git7d074da.fc28.x86_64 Provides: libneurosim-devel = 0-2.20181028.git7d074da.fc28 libneurosim-devel(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libneurosim.so.0()(64bit) Processing files: libneurosim-common-0-2.20181028.git7d074da.fc28.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.srJz0H + umask 022 + cd /builddir/build/BUILD + cd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + DOCDIR=/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/share/doc/libneurosim-common + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/share/doc/libneurosim-common + cp -pr README.md /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/share/doc/libneurosim-common + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.8fqKtj + umask 022 + cd /builddir/build/BUILD + cd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + LICENSEDIR=/builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/share/licenses/libneurosim-common + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/share/licenses/libneurosim-common + cp -pr COPYING /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64/usr/share/licenses/libneurosim-common + exit 0 Provides: libneurosim-common = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-libneurosim-0-2.20181028.git7d074da.fc28.x86_64 Provides: libpy3neurosim.so()(64bit) python3-libneurosim = 0-2.20181028.git7d074da.fc28 python3-libneurosim(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libneurosim.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) python(abi) = 3.6 rtld(GNU_HASH) Processing files: python2-libneurosim-0-2.20181028.git7d074da.fc28.x86_64 Provides: libpy2neurosim.so()(64bit) libpyneurosim.so()(64bit) python-libneurosim = 0-2.20181028.git7d074da.fc28 python2-libneurosim = 0-2.20181028.git7d074da.fc28 python2-libneurosim(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libneurosim.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) python(abi) = 2.7 rtld(GNU_HASH) Obsoletes: python-libneurosim < 0-2.20181028.git7d074da.fc28 Processing files: libneurosim-openmpi-0-2.20181028.git7d074da.fc28.x86_64 Provides: libneurosim-openmpi = 0-2.20181028.git7d074da.fc28 libneurosim-openmpi(x86-64) = 0-2.20181028.git7d074da.fc28 libneurosim.so.0()(64bit)(openmpi-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libmpi.so.20()(64bit)(openmpi-x86_64) libmpi_cxx.so.20()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libneurosim-openmpi-devel-0-2.20181028.git7d074da.fc28.x86_64 Provides: libneurosim-openmpi-devel = 0-2.20181028.git7d074da.fc28 libneurosim-openmpi-devel(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libneurosim.so.0()(64bit)(openmpi-x86_64) Processing files: python3-libneurosim-openmpi-0-2.20181028.git7d074da.fc28.x86_64 Provides: libpy3neurosim.so()(64bit)(openmpi-x86_64) python3-libneurosim-openmpi = 0-2.20181028.git7d074da.fc28 python3-libneurosim-openmpi(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libmpi.so.20()(64bit)(openmpi-x86_64) libmpi_cxx.so.20()(64bit)(openmpi-x86_64) libneurosim.so.0()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) python(abi) = 3.6 rtld(GNU_HASH) Processing files: python2-libneurosim-openmpi-0-2.20181028.git7d074da.fc28.x86_64 Provides: libpy2neurosim.so()(64bit)(openmpi-x86_64) libpyneurosim.so()(64bit)(openmpi-x86_64) python-libneurosim-openmpi = 0-2.20181028.git7d074da.fc28 python2-libneurosim-openmpi = 0-2.20181028.git7d074da.fc28 python2-libneurosim-openmpi(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libmpi.so.20()(64bit)(openmpi-x86_64) libmpi_cxx.so.20()(64bit)(openmpi-x86_64) libneurosim.so.0()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) python(abi) = 2.7 rtld(GNU_HASH) Obsoletes: python-libneurosim-openmpi < 0-2.20181028.git7d074da.fc28 Processing files: libneurosim-mpich-0-2.20181028.git7d074da.fc28.x86_64 Provides: libneurosim-mpich = 0-2.20181028.git7d074da.fc28 libneurosim-mpich(x86-64) = 0-2.20181028.git7d074da.fc28 libneurosim.so.0()(64bit)(mpich-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libmpicxx.so.12()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libneurosim-mpich-devel-0-2.20181028.git7d074da.fc28.x86_64 Provides: libneurosim-mpich-devel = 0-2.20181028.git7d074da.fc28 libneurosim-mpich-devel(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libneurosim.so.0()(64bit)(mpich-x86_64) Processing files: python3-libneurosim-mpich-0-2.20181028.git7d074da.fc28.x86_64 Provides: libpy3neurosim.so()(64bit)(mpich-x86_64) python3-libneurosim-mpich = 0-2.20181028.git7d074da.fc28 python3-libneurosim-mpich(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libm.so.6()(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libmpicxx.so.12()(64bit)(mpich-x86_64) libneurosim.so.0()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) python(abi) = 3.6 rtld(GNU_HASH) Processing files: python2-libneurosim-mpich-0-2.20181028.git7d074da.fc28.x86_64 Provides: libpy2neurosim.so()(64bit)(mpich-x86_64) libpyneurosim.so()(64bit)(mpich-x86_64) python-libneurosim-mpich = 0-2.20181028.git7d074da.fc28 python2-libneurosim-mpich = 0-2.20181028.git7d074da.fc28 python2-libneurosim-mpich(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libm.so.6()(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libmpicxx.so.12()(64bit)(mpich-x86_64) libneurosim.so.0()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) python(abi) = 2.7 rtld(GNU_HASH) Obsoletes: python-libneurosim-mpich < 0-2.20181028.git7d074da.fc28 Processing files: libneurosim-debugsource-0-2.20181028.git7d074da.fc28.x86_64 Provides: libneurosim-debugsource = 0-2.20181028.git7d074da.fc28 libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libneurosim-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = 39f18869e8316f2a03b6b38d5c32ddd9bdd71a96 libneurosim-debuginfo = 0-2.20181028.git7d074da.fc28 libneurosim-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Processing files: python3-libneurosim-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = 188f1083efde55a8b4fd023697bfcb7e96475c47 python3-libneurosim-debuginfo = 0-2.20181028.git7d074da.fc28 python3-libneurosim-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Processing files: python2-libneurosim-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = 55e9a2e5a8325fd64683b3dfb7a8c00767f5c171 debuginfo(build-id) = ff52ae5ae3f0cd7185f52ee4f00952127f73c6e9 python2-libneurosim-debuginfo = 0-2.20181028.git7d074da.fc28 python2-libneurosim-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Processing files: libneurosim-openmpi-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = 29cb33df6964a963dc66311d4b5916bba2d81668 libneurosim-openmpi-debuginfo = 0-2.20181028.git7d074da.fc28 libneurosim-openmpi-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Processing files: python3-libneurosim-openmpi-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = 66aac9a2ff03d19bcb5c854d69e7f3a1a162eef1 python3-libneurosim-openmpi-debuginfo = 0-2.20181028.git7d074da.fc28 python3-libneurosim-openmpi-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Processing files: python2-libneurosim-openmpi-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = 36576886cca77dfb91e87ff94bd7e8c967e3207b debuginfo(build-id) = f14a9568724c17f9bdd17c007c21e50ca26ceedc python2-libneurosim-openmpi-debuginfo = 0-2.20181028.git7d074da.fc28 python2-libneurosim-openmpi-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Processing files: libneurosim-mpich-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = aa912602aa4420c51e4deb54eeb85cc0bbec3538 libneurosim-mpich-debuginfo = 0-2.20181028.git7d074da.fc28 libneurosim-mpich-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Processing files: python3-libneurosim-mpich-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = 7f97609a55eb2bb8471e95731500ea98f03237de python3-libneurosim-mpich-debuginfo = 0-2.20181028.git7d074da.fc28 python3-libneurosim-mpich-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Processing files: python2-libneurosim-mpich-debuginfo-0-2.20181028.git7d074da.fc28.x86_64 Provides: debuginfo(build-id) = 85b28610b745420ee56ca51bcb5b76f2baa518a3 debuginfo(build-id) = f70f2c628597e82383f57f5f7b6551d94bd39f5a python2-libneurosim-mpich-debuginfo = 0-2.20181028.git7d074da.fc28 python2-libneurosim-mpich-debuginfo(x86-64) = 0-2.20181028.git7d074da.fc28 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 0-2.20181028.git7d074da.fc28 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 Wrote: /builddir/build/RPMS/libneurosim-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-devel-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-common-0-2.20181028.git7d074da.fc28.noarch.rpm Wrote: /builddir/build/RPMS/python3-libneurosim-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python2-libneurosim-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-openmpi-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-openmpi-devel-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libneurosim-openmpi-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python2-libneurosim-openmpi-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-mpich-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-mpich-devel-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libneurosim-mpich-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python2-libneurosim-mpich-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-debugsource-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libneurosim-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python2-libneurosim-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-openmpi-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libneurosim-openmpi-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python2-libneurosim-openmpi-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-mpich-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libneurosim-mpich-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Wrote: /builddir/build/RPMS/python2-libneurosim-mpich-debuginfo-0-2.20181028.git7d074da.fc28.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.1tiJiv + umask 022 + cd /builddir/build/BUILD + cd libneurosim-7d074da5124d6d2db4fd129706fa8465f99ffe9f + /usr/bin/rm -rf /builddir/build/BUILDROOT/libneurosim-0-2.20181028.git7d074da.fc28.x86_64 + exit 0 Child return code was: 0