Mock Version: 1.2.21
Mock Version: 1.2.21
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/vcftools.spec'], user='mockbuild'uid=1000timeout=172800gid=425env={'LANG': 'en_US.UTF-8', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"'}printOutput=FalsechrootPath='/var/lib/mock/f25-build-6793903-664733/root'shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f1329036da0>)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/vcftools.spec'] with env {'LANG': 'en_US.UTF-8', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"'} and shell False
Building target platforms: i686
Building for target i686
Wrote: /builddir/build/SRPMS/vcftools-0.1.14-1.fc25.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/vcftools.spec'], private_network=Trueuser='mockbuild'uid=1000timeout=172800gid=425env={'LANG': 'en_US.UTF-8', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"'}printOutput=FalsechrootPath='/var/lib/mock/f25-build-6793903-664733/root'shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f1329036da0>)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/vcftools.spec'] with env {'LANG': 'en_US.UTF-8', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"'} and shell False
Building target platforms: i686
Building for target i686
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.EeAfWX
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf vcftools-0.1.14
+ /usr/bin/gzip -dc /builddir/build/SOURCES/vcftools-0.1.14.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd vcftools-0.1.14
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.GnxTYw
+ umask 022
+ cd /builddir/build/BUILD
+ cd vcftools-0.1.14
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ '[' 1 = 1 ']'
+ '[' x '!=' x-specs=/usr/lib/rpm/redhat/redhat-hardened-ld ']'
++ find . -name ltmain.sh
+ ./configure --build=i686-redhat-linux-gnu --host=i686-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for i686-redhat-linux-gnu-g++... no
checking for i686-redhat-linux-gnu-c++... no
checking for i686-redhat-linux-gnu-gpp... no
checking for i686-redhat-linux-gnu-aCC... no
checking for i686-redhat-linux-gnu-CC... no
checking for i686-redhat-linux-gnu-cxx... no
checking for i686-redhat-linux-gnu-cc++... no
checking for i686-redhat-linux-gnu-cl.exe... no
checking for i686-redhat-linux-gnu-FCC... no
checking for i686-redhat-linux-gnu-KCC... no
checking for i686-redhat-linux-gnu-RCC... no
checking for i686-redhat-linux-gnu-xlC_r... no
checking for i686-redhat-linux-gnu-xlC... no
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... none
checking for i686-redhat-linux-gnu-gcc... no
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking how to run the C preprocessor... gcc -E
checking for perl... /usr/bin/perl
checking for i686-redhat-linux-gnu-pkg-config... /usr/bin/i686-redhat-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for ZLIB... yes
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking for stdint.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for unistd.h... (cached) yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for inline... inline
checking for int16_t... yes
checking for int32_t... yes
checking for int64_t... yes
checking for int8_t... yes
checking for off_t... yes
checking for size_t... yes
checking for ssize_t... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for uint8_t... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
checking for error_at_line... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for gethostbyaddr... yes
checking for gethostbyname... yes
checking for memset... yes
checking for pow... no
checking for select... yes
checking for socket... yes
checking for sqrt... no
checking for strchr... yes
checking for strdup... yes
checking for strerror... yes
checking for strstr... yes
checking for strtol... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/cpp/Makefile
config.status: creating src/perl/Makefile
config.status: creating config.h
config.status: executing depfiles commands
+ make -j16 'CPPFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables'
make  all-recursive
make[1]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14'
Making all in src
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src'
Making all in cpp
make[3]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src/cpp'
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-bcf_entry.o `test -f 'bcf_entry.cpp' || echo './'`bcf_entry.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-bcf_entry_setters.o `test -f 'bcf_entry_setters.cpp' || echo './'`bcf_entry_setters.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-bcf_file.o `test -f 'bcf_file.cpp' || echo './'`bcf_file.cpp
gcc -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-bgzf.o `test -f 'bgzf.c' || echo './'`bgzf.c
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-dgeev.o `test -f 'dgeev.cpp' || echo './'`dgeev.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-entry.o `test -f 'entry.cpp' || echo './'`entry.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-entry_filters.o `test -f 'entry_filters.cpp' || echo './'`entry_filters.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-entry_getters.o `test -f 'entry_getters.cpp' || echo './'`entry_getters.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-entry_setters.o `test -f 'entry_setters.cpp' || echo './'`entry_setters.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-gamma.o `test -f 'gamma.cpp' || echo './'`gamma.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-header.o `test -f 'header.cpp' || echo './'`header.cpp
gcc -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-knetfile.o `test -f 'knetfile.c' || echo './'`knetfile.c
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-output_log.o `test -f 'output_log.cpp' || echo './'`output_log.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-parameters.o `test -f 'parameters.cpp' || echo './'`parameters.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-variant_file.o `test -f 'variant_file.cpp' || echo './'`variant_file.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-variant_file_diff.o `test -f 'variant_file_diff.cpp' || echo './'`variant_file_diff.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-variant_file_filters.o `test -f 'variant_file_filters.cpp' || echo './'`variant_file_filters.cpp
bgzf.c: In function 'bgzf_check_EOF':
bgzf.c:60:34: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
 #define _bgzf_read(fp, buf, len) fread((buf), 1, (len), (FILE*)(fp))
                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bgzf.c:622:2: note: in expansion of macro '_bgzf_read'
  _bgzf_read(fp->fp, buf, 28);
  ^~~~~~~~~~
In file included from knetfile.c:46:0:
knetfile.c: In function 'kftp_send_cmd':
knetfile.h:9:32: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
 #define netwrite(fd, ptr, len) write(fd, ptr, len)
                                ^~~~~~~~~~~~~~~~~~~
knetfile.c:236:2: note: in expansion of macro 'netwrite'
  netwrite(ftp->ctrl_fd, cmd, strlen(cmd));
  ^~~~~~~~
knetfile.c: In function 'khttp_connect_file':
knetfile.h:9:32: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result]
 #define netwrite(fd, ptr, len) write(fd, ptr, len)
                                ^~~~~~~~~~~~~~~~~~~
knetfile.c:415:2: note: in expansion of macro 'netwrite'
  netwrite(fp->fd, buf, l);
  ^~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-variant_file_format_convert.o `test -f 'variant_file_format_convert.cpp' || echo './'`variant_file_format_convert.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-variant_file_output.o `test -f 'variant_file_output.cpp' || echo './'`variant_file_output.cpp
output_log.cpp: In member function 'void output_log::printLOG(std::__cxx11::string)':
output_log.cpp:42:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  if (output_to_file)
  ^~
output_log.cpp:43:13: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
   LOG << s; LOG.flush();
             ^~~
output_log.cpp:44:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  if (output_to_screen)
  ^~
output_log.cpp:45:14: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
   cerr << s; cerr.flush();
              ^~~~
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-vcf_entry.o `test -f 'vcf_entry.cpp' || echo './'`vcf_entry.cpp
header.cpp: In static member function 'static void header::split(const string&, char, std::vector<std::__cxx11::basic_string<char> >&)':
header.cpp:460:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  while ((end = text.find(sep, start)) != string::npos)
         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
parameters.cpp: In member function 'void parameters::print_params()':
parameters.cpp:487:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
     if (output_N_PCA_SNP_loadings != defaults.output_N_PCA_SNP_loadings)
     ^~
parameters.cpp:489:2: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'if'
  if (output_prefix != defaults.output_prefix) LOG.printLOG("\t--out " + output_prefix + "\n");
  ^~
entry_filters.cpp: In member function 'void entry::filter_sites_by_overlap_positions(const string&, const string&)':
entry_filters.cpp:540:4: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
    for (unsigned int ui=POS; ui<(POS+REF.size()); ui++)
    ^~~
entry_filters.cpp:544:5: note: ...this statement, but the latter is misleadingly indented as if it is guarded by the 'for'
     if (found == true)
     ^~
entry_filters.cpp: In member function 'void entry::filter_sites_by_frequency_and_call_rate(double, double, double, double, double, double, double)':
entry_filters.cpp:814:70: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  if (((min_non_ref_af > 0.0) || (max_non_ref_af < 1.0)) && (N_failed == (N_alleles-1)))
                                                             ~~~~~~~~~^~~~~~~~~~~~~~~~
entry_filters.cpp: In member function 'void entry::filter_sites_by_allele_count(double, double, double, double, double, double, double)':
entry_filters.cpp:912:99: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  if (((min_non_ref_ac_any > 0) || (max_non_ref_ac_any < numeric_limits<int>::max())) && (N_failed == (N_alleles-1)))
                                                                                          ~~~~~~~~~^~~~~~~~~~~~~~~~
variant_file_diff.cpp: In member function 'void variant_file::output_sites_in_files(const parameters&, variant_file&)':
variant_file_diff.cpp:219:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (POS2 < (POS1+REF1.size()))
         ~~~~~^~~~~~~~~~~~~~~~~~~~
variant_file_diff.cpp:235:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (POS1 < (POS2+REF2.size()))
         ~~~~~^~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-vcf_entry_setters.o `test -f 'vcf_entry_setters.cpp' || echo './'`vcf_entry_setters.cpp
variant_file_output.cpp: In member function 'void variant_file::output_haplotype_r2(const parameters&)':
variant_file_output.cpp:1540:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for(unsigned int ui=0; ui<site_count-1; ui++)
                         ~~^~~~~~~~~~~~~
variant_file_output.cpp:1547:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(uj=ui+1; uj<site_count; uj++)
                ~~^~~~~~~~~~~
variant_file_output.cpp: In member function 'void variant_file::output_genotype_r2(const parameters&)':
variant_file_output.cpp:1713:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for(unsigned int ui=0; ui<count-1; ui++)
                         ~~^~~~~~~~
variant_file_output.cpp:1720:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(uj=ui+1; uj<count; uj++)
                ~~^~~~~~
variant_file_output.cpp: In member function 'void variant_file::output_interchromosomal_genotype_r2(const parameters&)':
variant_file_output.cpp:2050:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for(unsigned int ui=0; ui<count-1; ui++)
                         ~~^~~~~~~~
variant_file_output.cpp:2057:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(uj=ui+1; uj<count; uj++)
                ~~^~~~~~
variant_file_output.cpp: In member function 'void variant_file::output_interchromosomal_haplotype_r2(const parameters&)':
variant_file_output.cpp:2211:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for(unsigned int ui=0; ui<site_count-1; ui++)
                         ~~^~~~~~~~~~~~~
vcf_entry.cpp: In member function 'virtual void vcf_entry::parse_genotype_entry(unsigned int, bool, bool, bool, bool)':
vcf_entry.cpp:135:52: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  while ((end = GENOTYPE_str[indv].find(':',start)) != string::npos)
         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
variant_file_output.cpp:2218:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(uj=ui+1; uj<site_count; uj++)
                ~~^~~~~~~~~~~
variant_file_output.cpp: In member function 'void variant_file::output_haplotype_r2_of_SNP_list_vs_all_others(const parameters&)':
variant_file_output.cpp:2442:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for(unsigned int ui=0; ui<nlist; ui++)
                         ~~^~~~~~
variant_file_output.cpp: In member function 'void variant_file::output_genotype_r2_of_SNP_list_vs_all_others(const parameters&)':
variant_file_output.cpp:2675:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for(unsigned int ui=0; ui<nlist; ui++)
                         ~~^~~~~~
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-vcf_file.o `test -f 'vcf_file.cpp' || echo './'`vcf_file.cpp
g++ -DHAVE_CONFIG_H -I. -I../..   -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c -o vcftools-vcftools.o `test -f 'vcftools.cpp' || echo './'`vcftools.cpp
variant_file_output.cpp: In member function 'void variant_file::output_haplotype_count(const parameters&)':
variant_file_output.cpp:1372:2: warning: 'idx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  if (idx == prev_idx)
  ^~
g++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables  -Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o vcftools vcftools-bcf_entry.o vcftools-bcf_entry_setters.o vcftools-bcf_file.o vcftools-bgzf.o vcftools-dgeev.o vcftools-entry.o vcftools-entry_filters.o vcftools-entry_getters.o vcftools-entry_setters.o vcftools-gamma.o vcftools-header.o vcftools-knetfile.o vcftools-output_log.o vcftools-parameters.o vcftools-variant_file.o vcftools-variant_file_diff.o vcftools-variant_file_filters.o vcftools-variant_file_format_convert.o vcftools-variant_file_output.o vcftools-vcf_entry.o vcftools-vcf_entry_setters.o vcftools-vcf_file.o vcftools-vcftools.o -lz 
make[3]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src/cpp'
Making all in perl
make[3]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src/perl'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src/perl'
make[3]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[3]: Nothing to be done for 'all-am'.
make[3]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14'
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14'
make[1]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14'
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.8OkYJa
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386
++ dirname /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386
+ cd vcftools-0.1.14
+ make install DESTDIR=/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386 'INSTALL=install -p'
Making install in src
make[1]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src'
Making install in cpp
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src/cpp'
make[3]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src/cpp'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/bin'
  install -p vcftools '/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/bin'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/share/man/man1'
 install -p -m 644 vcftools.1 '/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/share/man/man1'
make[3]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src/cpp'
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src/cpp'
Making install in perl
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src/perl'
make[3]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src/perl'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/bin'
 install -p fill-aa fill-an-ac fill-fs fill-ref-md5 vcf-annotate vcf-compare vcf-concat vcf-consensus vcf-contrast vcf-convert vcf-fix-newlines vcf-fix-ploidy vcf-indel-stats vcf-isec vcf-merge vcf-phased-join vcf-query vcf-shuffle-cols vcf-sort vcf-stats vcf-subset vcf-to-tab vcf-tstv vcf-validator '/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/bin'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/share/perl5'
 install -p -m 644 FaSlice.pm Vcf.pm VcfStats.pm '/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/share/perl5'
make[3]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src/perl'
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src/perl'
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[3]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[1]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[1]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14'
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14'
make[2]: Nothing to be done for 'install-exec-am'.
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14'
make[1]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14'
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/vcftools-0.1.14
extracting debug info from /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/bin/vcftools
dwz: Too few files for multifile optimization
/usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
987 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.VHEOLT
+ umask 022
+ cd /builddir/build/BUILD
+ cd vcftools-0.1.14
+ make check
Making check in src
make[1]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src'
Making check in cpp
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src/cpp'
make[2]: Nothing to be done for 'check'.
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src/cpp'
Making check in perl
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src/perl'
make[2]: Nothing to be done for 'check'.
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src/perl'
make[2]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[2]: Nothing to be done for 'check-am'.
make[2]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[1]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14/src'
make[1]: Entering directory '/builddir/build/BUILD/vcftools-0.1.14'
make[1]: Leaving directory '/builddir/build/BUILD/vcftools-0.1.14'
+ exit 0
Processing files: vcftools-0.1.14-1.fc25.i686
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.jyaBVC
+ umask 022
+ cd /builddir/build/BUILD
+ cd vcftools-0.1.14
+ DOCDIR=/builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/share/doc/vcftools
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/share/doc/vcftools
+ cp -pr LICENSE /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/share/doc/vcftools
+ cp -pr README.md /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386/usr/share/doc/vcftools
+ exit 0
Provides: perl(FaSlice) perl(Vcf) perl(Vcf3_2) perl(Vcf3_3) perl(Vcf4_0) perl(Vcf4_1) perl(Vcf4_2) perl(VcfReader) perl(VcfStats) vcftools = 0.1.14-1.fc25 vcftools(x86-32) = 0.1.14-1.fc25
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/env libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.15) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libc.so.6(GLIBC_2.7) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libm.so.6 libm.so.6(GLIBC_2.0) libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.9) libz.so.1 libz.so.1(ZLIB_1.2.0) libz.so.1(ZLIB_1.2.3.3) libz.so.1(ZLIB_1.2.3.5) perl(Carp) perl(Data::Dumper) perl(Exporter) perl(FaSlice) perl(FindBin) perl(IO::Select) perl(IPC::Open2) perl(IPC::Open3) perl(List::Util) perl(POSIX) perl(Vcf) perl(Vcf4_0) perl(Vcf4_1) perl(VcfReader) perl(VcfStats) perl(base) perl(lib) perl(strict) perl(vars) perl(warnings) rtld(GNU_HASH)
Processing files: vcftools-debuginfo-0.1.14-1.fc25.i686
Provides: vcftools-debuginfo = 0.1.14-1.fc25 vcftools-debuginfo(x86-32) = 0.1.14-1.fc25
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386
Wrote: /builddir/build/RPMS/vcftools-0.1.14-1.fc25.i686.rpm
Wrote: /builddir/build/RPMS/vcftools-debuginfo-0.1.14-1.fc25.i686.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.N19kks
+ umask 022
+ cd /builddir/build/BUILD
+ cd vcftools-0.1.14
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/vcftools-0.1.14-1.fc25.i386
+ exit 0
Child return code was: 0