Mock Version: 1.3.4 Mock Version: 1.3.4 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target noarch --nodeps /builddir/build/SPECS/R-R.oo.spec'], chrootPath='/var/lib/mock/f26-build-11896843-881808/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]printOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target noarch --nodeps /builddir/build/SPECS/R-R.oo.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: noarch Building for target noarch Wrote: /builddir/build/SRPMS/R-R.oo-1.21.0-2.fc26.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target noarch --nodeps /builddir/build/SPECS/R-R.oo.spec'], chrootPath='/var/lib/mock/f26-build-11896843-881808/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]printOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target noarch --nodeps /builddir/build/SPECS/R-R.oo.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: noarch Building for target noarch Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.GqV1Rb + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf R.oo + /usr/bin/mkdir -p R.oo + cd R.oo + /usr/bin/gzip -dc /builddir/build/SOURCES/R.oo_1.21.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + for file in R.oo/inst/CITATION R.oo/NEWS + sed 's|\r||g' R.oo/inst/CITATION + touch -r R.oo/inst/CITATION R.oo/inst/CITATION.new + mv R.oo/inst/CITATION.new R.oo/inst/CITATION + for file in R.oo/inst/CITATION R.oo/NEWS + sed 's|\r||g' R.oo/NEWS + touch -r R.oo/NEWS R.oo/NEWS.new + mv R.oo/NEWS.new R.oo/NEWS + file=R.oo/NEWS + iconv -f latin1 -t UTF-8 R.oo/NEWS + touch -r R.oo/NEWS R.oo/NEWS.new + mv R.oo/NEWS.new R.oo/NEWS + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.m5SmFO + umask 022 + cd /builddir/build/BUILD + cd R.oo + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Zm9atr + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch ++ dirname /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch + cd R.oo + mkdir -p /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch/usr/share/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch/usr/share/R/library R.oo * installing *source* package 'R.oo' ... files 'NEWS', 'inst/CITATION' have the wrong MD5 checksums ** R ** inst ** preparing package for lazy loading ** help *** installing help indices converting help for package 'R.oo' finding HTML links ... done 000.makeObjectFinalizer html ASCII html BasicObject html Class html DOLLAR.BasicObject html DOLLAR.Class html DOLLAR.Object html DOLLARLT_-.BasicObject html DOLLARLT_-.Class html DOLLARLT_-.Object html Exception html Interface html InternalErrorException html Non-documented_objects html Object html Package html R.oo-package html RccViolationException html Rdoc html RdocException html abort html Rd warning: /builddir/build/BUILD/R.oo/R.oo/man/abort.Rd:78: missing file link 'invokeRestart' argsToString.Class html argsToString.Rdoc html as.character.BasicObject html as.character.Class html as.character.Exception html as.character.Interface html as.character.Object html as.character.Package html as.character.RccViolationException html as.character.RdocException html attach.BasicObject html attach.Object html attachLocally.Object html charToInt html check.Rdoc html clearCache.Object html clearLookupCache.Object html clone.Object html compile.Rdoc html compileRdoc html createManPath.Rdoc html createName.Rdoc html declaration.Rdoc html detach.BasicObject html detach.Object html dimension html equals.BasicObject html equals.Object html equals html escapeRdFilename.Rdoc html extend.BasicObject html extend.Interface html extend.Object html extend html finalize.Object html forName.Class html gc.Object html getAuthor.Package html Rd warning: /builddir/build/BUILD/R.oo/R.oo/man/getAuthor.Package.Rd:28: missing file link 'format.person' getBundle.Package html getBundlePackages.Package html getCalls.Exception html getChangeLog.Package html getClassS4Usage.Rdoc html getClasses.Package html getConstructorS3 html getContents.Package html getContribUrl.Package html getDataPath.Package html getDate.Package html getDescription.Package html getDescriptionFile.Package html getDetails.Class html getDevelUrl.Package html getDocPath.Package html getEnvironment.Object html getEnvironment.Package html getExamplePath.Package html getFieldModifiers.Object html getFields.BasicObject html getFields.Class html getFields.Interface html getFields.Object html getHowToCite.Package html getInstantiationTime.BasicObject html getInstantiationTime.Object html getInternalAddress.Object html getKeywords.Rdoc html getKnownSubclasses.Class html getKnownSubclasses.classRepresentation html getLastException.Exception html getLicense.Package html getMaintainer.Package html Rd warning: /builddir/build/BUILD/R.oo/R.oo/man/getMaintainer.Package.Rd:28: missing file link 'format.person' getManPath.Rdoc html getMessage.Exception html getMessage.InternalErrorException html getMethods.Class html getName.Class html getName.Package html getName.environment html getNameFormat.Rdoc html getPackage.Class html getPackage.InternalErrorException html getPackageNameOf.Rdoc html getPath.Package html getPosition.Package html getRccUrl.RccViolationException html getRdDeclaration.Class html getRdDeclaration.classRepresentation html getRdHierarchy.Class html getRdHierarchy.classRepresentation html getRdMethods.Class html getRdMethods.classRepresentation html getRdTitle.Rdoc html getSource.RdocException html getStackTrace.Exception html getStackTraceString.Exception html getStaticInstance.Class html getStaticInstance.Object html getSuperclasses.Class html getSuperclasses.classRepresentation html getTitle.Package html getUrl.Package html getUsage.Rdoc html getVersion.Package html getWhen.Exception html hasField.BasicObject html hasField.Object html hashCode.BasicObject html hashCode.Object html hashCode html hierarchy.Rdoc html intToChar html isAbstract.Class html isBeingCreated.Class html isDeprecated.Class html isKeyword.Rdoc html isLoaded.Package html isOlderThan.Package html isPrivate.Class html isProtected.Class html isPublic.Class html isReferable.BasicObject html isReferable.Object html isStatic.Class html isVisible.Rdoc html ll.Object html ll.Package html ll html Rd warning: /builddir/build/BUILD/R.oo/R.oo/man/ll.Rd:94: missing file link 'ls.str' load.Object html load.Package html methodsInheritedFrom.Rdoc html newInstance.BasicObject html newInstance.Class html newInstance.Object html novirtual.Object html objectSize.BasicObject html objectSize.Object html objectSize html objectSize.environment html print.BasicObject html print.Class html print.Exception html print.Interface html print.Object html printStackTrace.Exception html registerFinalizer.Object html save.Object html setConstructorS3 html setManPath.Rdoc html setNameFormat.Rdoc html showChangeLog.Package html showContents.Package html showDescriptionFile.Package html showHowToCite.Package html startupMessage.Package html staticCode.Object html throw.Exception html throw html throw.error html trim html typeOfClass html unload.Package html update.Package html uses.Interface html ** building package indices ** testing if installed package can be loaded * DONE (R.oo) + test -d R.oo/src + rm -f /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch/usr/share/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/R.oo + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 + /usr/lib/rpm/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.1xBh2e + umask 022 + cd /builddir/build/BUILD + cd R.oo + /usr/bin/R CMD check R.oo * using log directory '/builddir/build/BUILD/R.oo/R.oo.Rcheck' * using R version 3.4.3 (2017-11-30) * using platform: x86_64-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'R.oo/DESCRIPTION' ... OK * this is package 'R.oo' version '1.21.0' * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.6/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.6/bioc/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.6/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.6/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.6/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.6/data/experiment/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'R.oo' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... WARNING Error: package 'R.methodsS3' required by 'R.oo' could not be found Execution halted It looks like this package has a loading problem when not on .libPaths: see the messages for details. * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'ASCII.R' Running 'BasicObject.R' Running 'Class.R' Running 'Exception.R' Running 'Interface.R' Running 'InternalErrorException.reportBug.R' Running 'Object.R' Running 'Object.finalize,noattach.R' Running 'Object.finalize,onoff.R' Running 'Object.finalize.R' Running 'Package.R' Running 'Package.unload.R' Running 'StaticMethodsAndNamespaces.R' Running 'abort.R' Running 'attachLocally.Object.R' Running 'equals.R' Running 'extend.default.R' Running 'getConstructorS3.R' Running 'hashCode.R' Running 'isBeingCreated.Class.R' Running 'll.R' Running 'local.R' Running 'objectSize.R' Running 'throw.R' Running 'trim.R' Running 'typeOfClass.R' Running 'zzz.Object.finalize,reentrant.R' OK * checking PDF version of manual ... OK * DONE Status: 1 WARNING See '/builddir/build/BUILD/R.oo/R.oo.Rcheck/00check.log' for details. + exit 0 Processing files: R-R.oo-1.21.0-2.fc26.noarch Provides: R-R.oo = 1.21.0-2.fc26 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch Wrote: /builddir/build/RPMS/R-R.oo-1.21.0-2.fc26.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.qiZ5Kv + umask 022 + cd /builddir/build/BUILD + cd R.oo + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-R.oo-1.21.0-2.fc26.noarch + exit 0 Child return code was: 0