Mock Version: 1.3.4 Mock Version: 1.3.4 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/ProDy.spec'], chrootPath='/var/lib/mock/f26-build-10467819-811542/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]printOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/ProDy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False sh: /usr/bin/python: No such file or directory Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/ProDy-1.9.3-1.fc26.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/ProDy.spec'], chrootPath='/var/lib/mock/f26-build-10467819-811542/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]printOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/ProDy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.WKMc2g + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf ProDy-1.9.3 + /usr/bin/mkdir -p ProDy-1.9.3 + cd ProDy-1.9.3 + /usr/bin/gzip -dc /builddir/build/SOURCES/ProDy-1.9.3.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + mv ProDy-1.9.3 python2 ~/build/BUILD/ProDy-1.9.3/python2 ~/build/BUILD/ProDy-1.9.3 + pushd python2 + rm prody/atomic/pyparsing.py + rm -rf prody/KDTree + rm prody/proteins/pairwise2.py prody/proteins/cpairwise2.c + rm prody/apps/argparse.py ~/build/BUILD/ProDy-1.9.3 + popd + cp -a python2 python3 + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.KaRUAL + umask 022 + cd /builddir/build/BUILD + cd ProDy-1.9.3 + pushd python3 ~/build/BUILD/ProDy-1.9.3/python3 ~/build/BUILD/ProDy-1.9.3 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -Wl,-z,relro -Wl,-z,now' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_py creating build creating build/lib.linux-x86_64-3.6 creating build/lib.linux-x86_64-3.6/prody copying prody/__init__.py -> build/lib.linux-x86_64-3.6/prody creating build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/atom.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/bond.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/fields.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/segment.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/__init__.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/flags.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/atomgroup.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/residue.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/selection.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/chain.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/functions.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/hierview.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/subset.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/pointer.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/atommap.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/select.py -> build/lib.linux-x86_64-3.6/prody/atomic copying prody/atomic/atomic.py -> build/lib.linux-x86_64-3.6/prody/atomic creating build/lib.linux-x86_64-3.6/prody/database copying prody/database/pfam.py -> build/lib.linux-x86_64-3.6/prody/database copying prody/database/__init__.py -> build/lib.linux-x86_64-3.6/prody/database creating build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/compare.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/vmdfile.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/pca.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/gnm.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/heatmapper.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/modeset.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/nmdfile.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/gamma.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/nma.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/__init__.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/sampling.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/bbenm.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/mode.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/analysis.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/rtb.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/editing.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/exanm.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/functions.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/plotting.py -> build/lib.linux-x86_64-3.6/prody/dynamics copying prody/dynamics/anm.py -> build/lib.linux-x86_64-3.6/prody/dynamics creating build/lib.linux-x86_64-3.6/prody/ensemble copying prody/ensemble/__init__.py -> build/lib.linux-x86_64-3.6/prody/ensemble copying prody/ensemble/ensemble.py -> build/lib.linux-x86_64-3.6/prody/ensemble copying prody/ensemble/conformation.py -> build/lib.linux-x86_64-3.6/prody/ensemble copying prody/ensemble/pdbensemble.py -> build/lib.linux-x86_64-3.6/prody/ensemble copying prody/ensemble/functions.py -> build/lib.linux-x86_64-3.6/prody/ensemble creating build/lib.linux-x86_64-3.6/prody/kdtree copying prody/kdtree/__init__.py -> build/lib.linux-x86_64-3.6/prody/kdtree copying prody/kdtree/kdtree.py -> build/lib.linux-x86_64-3.6/prody/kdtree creating build/lib.linux-x86_64-3.6/prody/measure copying prody/measure/contacts.py -> build/lib.linux-x86_64-3.6/prody/measure copying prody/measure/__init__.py -> build/lib.linux-x86_64-3.6/prody/measure copying prody/measure/measure.py -> build/lib.linux-x86_64-3.6/prody/measure copying prody/measure/transform.py -> build/lib.linux-x86_64-3.6/prody/measure creating build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/compare.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/ciffile.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/blastpdb.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/wwpdb.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/__init__.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/pdbclusters.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/pdbfile.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/blastpdbUniProtKB.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/header.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/dssp.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/localpdb.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/functions.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/stride.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/emdfile.py -> build/lib.linux-x86_64-3.6/prody/proteins copying prody/proteins/pdbligands.py -> build/lib.linux-x86_64-3.6/prody/proteins creating build/lib.linux-x86_64-3.6/prody/sequence copying prody/sequence/msafile.py -> build/lib.linux-x86_64-3.6/prody/sequence copying prody/sequence/__init__.py -> build/lib.linux-x86_64-3.6/prody/sequence copying prody/sequence/analysis.py -> build/lib.linux-x86_64-3.6/prody/sequence copying prody/sequence/msa.py -> build/lib.linux-x86_64-3.6/prody/sequence copying prody/sequence/plotting.py -> build/lib.linux-x86_64-3.6/prody/sequence copying prody/sequence/sequence.py -> build/lib.linux-x86_64-3.6/prody/sequence creating build/lib.linux-x86_64-3.6/prody/trajectory copying prody/trajectory/frame.py -> build/lib.linux-x86_64-3.6/prody/trajectory copying prody/trajectory/trajectory.py -> build/lib.linux-x86_64-3.6/prody/trajectory copying prody/trajectory/__init__.py -> build/lib.linux-x86_64-3.6/prody/trajectory copying prody/trajectory/trajbase.py -> build/lib.linux-x86_64-3.6/prody/trajectory copying prody/trajectory/trajfile.py -> build/lib.linux-x86_64-3.6/prody/trajectory copying prody/trajectory/psffile.py -> build/lib.linux-x86_64-3.6/prody/trajectory copying prody/trajectory/dcdfile.py -> build/lib.linux-x86_64-3.6/prody/trajectory creating build/lib.linux-x86_64-3.6/prody/chromatin copying prody/chromatin/norm.py -> build/lib.linux-x86_64-3.6/prody/chromatin copying prody/chromatin/hic.py -> build/lib.linux-x86_64-3.6/prody/chromatin copying prody/chromatin/__init__.py -> build/lib.linux-x86_64-3.6/prody/chromatin copying prody/chromatin/cluster.py -> build/lib.linux-x86_64-3.6/prody/chromatin copying prody/chromatin/functions.py -> build/lib.linux-x86_64-3.6/prody/chromatin creating build/lib.linux-x86_64-3.6/prody/utilities copying prody/utilities/logger.py -> build/lib.linux-x86_64-3.6/prody/utilities copying prody/utilities/doctools.py -> build/lib.linux-x86_64-3.6/prody/utilities copying prody/utilities/pathtools.py -> build/lib.linux-x86_64-3.6/prody/utilities copying prody/utilities/__init__.py -> build/lib.linux-x86_64-3.6/prody/utilities copying prody/utilities/settings.py -> build/lib.linux-x86_64-3.6/prody/utilities copying prody/utilities/misctools.py -> build/lib.linux-x86_64-3.6/prody/utilities copying prody/utilities/checkers.py -> build/lib.linux-x86_64-3.6/prody/utilities creating build/lib.linux-x86_64-3.6/prody/apps copying prody/apps/apptools.py -> build/lib.linux-x86_64-3.6/prody/apps copying prody/apps/__init__.py -> build/lib.linux-x86_64-3.6/prody/apps creating build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> build/lib.linux-x86_64-3.6/prody/apps/prody_apps creating build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> build/lib.linux-x86_64-3.6/prody/apps/evol_apps creating build/lib.linux-x86_64-3.6/prody/tests copying prody/tests/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests creating build/lib.linux-x86_64-3.6/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> build/lib.linux-x86_64-3.6/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> build/lib.linux-x86_64-3.6/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> build/lib.linux-x86_64-3.6/prody/tests/apps copying prody/tests/apps/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> build/lib.linux-x86_64-3.6/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> build/lib.linux-x86_64-3.6/prody/tests/apps creating build/lib.linux-x86_64-3.6/prody/tests/atomic copying prody/tests/atomic/test_select.py -> build/lib.linux-x86_64-3.6/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> build/lib.linux-x86_64-3.6/prody/tests/atomic copying prody/tests/atomic/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> build/lib.linux-x86_64-3.6/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> build/lib.linux-x86_64-3.6/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> build/lib.linux-x86_64-3.6/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> build/lib.linux-x86_64-3.6/prody/tests/atomic creating build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/datafiles creating build/lib.linux-x86_64-3.6/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> build/lib.linux-x86_64-3.6/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> build/lib.linux-x86_64-3.6/prody/tests/dynamics creating build/lib.linux-x86_64-3.6/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> build/lib.linux-x86_64-3.6/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> build/lib.linux-x86_64-3.6/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> build/lib.linux-x86_64-3.6/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> build/lib.linux-x86_64-3.6/prody/tests/ensemble creating build/lib.linux-x86_64-3.6/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> build/lib.linux-x86_64-3.6/prody/tests/kdtree creating build/lib.linux-x86_64-3.6/prody/tests/measure copying prody/tests/measure/test_measure.py -> build/lib.linux-x86_64-3.6/prody/tests/measure copying prody/tests/measure/test_contacts.py -> build/lib.linux-x86_64-3.6/prody/tests/measure copying prody/tests/measure/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/measure copying prody/tests/measure/test_transform.py -> build/lib.linux-x86_64-3.6/prody/tests/measure creating build/lib.linux-x86_64-3.6/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> build/lib.linux-x86_64-3.6/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> build/lib.linux-x86_64-3.6/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> build/lib.linux-x86_64-3.6/prody/tests/proteins copying prody/tests/proteins/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/proteins copying prody/tests/proteins/test_header.py -> build/lib.linux-x86_64-3.6/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> build/lib.linux-x86_64-3.6/prody/tests/proteins creating build/lib.linux-x86_64-3.6/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> build/lib.linux-x86_64-3.6/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> build/lib.linux-x86_64-3.6/prody/tests/sequence copying prody/tests/sequence/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> build/lib.linux-x86_64-3.6/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> build/lib.linux-x86_64-3.6/prody/tests/sequence creating build/lib.linux-x86_64-3.6/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> build/lib.linux-x86_64-3.6/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> build/lib.linux-x86_64-3.6/prody/tests/trajectory creating build/lib.linux-x86_64-3.6/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> build/lib.linux-x86_64-3.6/prody/tests/utilities copying prody/tests/utilities/__init__.py -> build/lib.linux-x86_64-3.6/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> build/lib.linux-x86_64-3.6/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> build/lib.linux-x86_64-3.6/prody/tests/utilities copying prody/tests/datafiles/pdb1ejg.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> build/lib.linux-x86_64-3.6/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> build/lib.linux-x86_64-3.6/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build/temp.linux-x86_64-3.6 creating build/temp.linux-x86_64-3.6/prody creating build/temp.linux-x86_64-3.6/prody/dynamics gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -Wl,-z,relro -Wl,-z,now -fPIC -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c prody/dynamics/rtbtools.c -o build/temp.linux-x86_64-3.6/prody/dynamics/rtbtools.o gcc -pthread -shared -Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -g -Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -g -flto -fuse-linker-plugin -ffat-lto-objects -flto-partition=none -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -Wl,-z,relro -Wl,-z,now build/temp.linux-x86_64-3.6/prody/dynamics/rtbtools.o -L/usr/lib64 -lpython3.6m -o build/lib.linux-x86_64-3.6/prody/dynamics/rtbtools.cpython-36m-x86_64-linux-gnu.so building 'prody.dynamics.smtools' extension gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -Wl,-z,relro -Wl,-z,now -fPIC -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c prody/dynamics/smtools.c -o build/temp.linux-x86_64-3.6/prody/dynamics/smtools.o gcc -pthread -shared -Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -g -Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -g -flto -fuse-linker-plugin -ffat-lto-objects -flto-partition=none -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -Wl,-z,relro -Wl,-z,now build/temp.linux-x86_64-3.6/prody/dynamics/smtools.o -L/usr/lib64 -lpython3.6m -o build/lib.linux-x86_64-3.6/prody/dynamics/smtools.cpython-36m-x86_64-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-x86_64-3.6/prody/sequence gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -Wl,-z,relro -Wl,-z,now -fPIC -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c prody/sequence/msatools.c -o build/temp.linux-x86_64-3.6/prody/sequence/msatools.o prody/sequence/msatools.c: In function ‘msapsicov’: prody/sequence/msatools.c:2237:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] for (i=0; i /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble copying build/lib.linux-x86_64-3.6/prody/ensemble/ensemble.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble copying build/lib.linux-x86_64-3.6/prody/ensemble/conformation.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble copying build/lib.linux-x86_64-3.6/prody/ensemble/pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble copying build/lib.linux-x86_64-3.6/prody/ensemble/functions.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/atom.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/bond.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/fields.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/segment.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/flags.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/atomgroup.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/residue.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/selection.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/chain.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/functions.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/hierview.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/subset.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/pointer.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/atommap.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/select.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic copying build/lib.linux-x86_64-3.6/prody/atomic/atomic.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/msafile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/seqtools.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/analysis.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/msa.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/msatools.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/plotting.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/sequence.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence copying build/lib.linux-x86_64-3.6/prody/sequence/msaio.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps copying build/lib.linux-x86_64-3.6/prody/apps/apptools.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_select.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_align.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_fetch.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_pca.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_anm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/nmaoptions.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_contacts.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_blast.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_biomol.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps copying build/lib.linux-x86_64-3.6/prody/apps/prody_apps/prody_eda.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_fetch.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_merge.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_rankorder.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_coevol.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_conserv.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_search.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_refine.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_occupancy.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/evol_apps/evol_filter.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps copying build/lib.linux-x86_64-3.6/prody/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/database copying build/lib.linux-x86_64-3.6/prody/database/pfam.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/database copying build/lib.linux-x86_64-3.6/prody/database/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/database creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure copying build/lib.linux-x86_64-3.6/prody/measure/contacts.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure copying build/lib.linux-x86_64-3.6/prody/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure copying build/lib.linux-x86_64-3.6/prody/measure/measure.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure copying build/lib.linux-x86_64-3.6/prody/measure/transform.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure copying build/lib.linux-x86_64-3.6/prody/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-3.6/prody/tests/ensemble/test_pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-3.6/prody/tests/ensemble/test_functions.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-3.6/prody/tests/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-3.6/prody/tests/ensemble/test_ensemble.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble copying build/lib.linux-x86_64-3.6/prody/tests/ensemble/test_conformation.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-3.6/prody/tests/atomic/test_select.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-3.6/prody/tests/atomic/test_atommap.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-3.6/prody/tests/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-3.6/prody/tests/atomic/test_atomic.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-3.6/prody/tests/atomic/test_hierview.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-3.6/prody/tests/atomic/test_fragment.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic copying build/lib.linux-x86_64-3.6/prody/tests/atomic/test_subset.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-3.6/prody/tests/sequence/test_sequence.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-3.6/prody/tests/sequence/test_msafile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-3.6/prody/tests/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-3.6/prody/tests/sequence/test_msa.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence copying build/lib.linux-x86_64-3.6/prody/tests/sequence/test_analysis.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps copying build/lib.linux-x86_64-3.6/prody/tests/apps/test_prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps copying build/lib.linux-x86_64-3.6/prody/tests/apps/test_prody_pca.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps copying build/lib.linux-x86_64-3.6/prody/tests/apps/test_prody_anm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps copying build/lib.linux-x86_64-3.6/prody/tests/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps copying build/lib.linux-x86_64-3.6/prody/tests/apps/test_prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps copying build/lib.linux-x86_64-3.6/prody/tests/apps/test_prody_examples.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure copying build/lib.linux-x86_64-3.6/prody/tests/measure/test_measure.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure copying build/lib.linux-x86_64-3.6/prody/tests/measure/test_contacts.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure copying build/lib.linux-x86_64-3.6/prody/tests/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure copying build/lib.linux-x86_64-3.6/prody/tests/measure/test_transform.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure copying build/lib.linux-x86_64-3.6/prody/tests/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/msa_Cys_knot.slx -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdb1ejg.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdb1ubi_ca.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdb1ubi.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/rtb2gb1_hessian.coo -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/msa_Cys_knot_sca.dat -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/xmlSTI.xml -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/anm1ubi_hessian.coo -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/anm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/rtb2gb1_project.coo -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdb2k39_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/anm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdbRTER.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdb3mht.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdb2gb1_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/msa_Cys_knot.sth -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/pdb1r19_dssp.pdb -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/msa_Cys_knot.fasta -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/gnm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/gnm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/msa_Cys_knot_di.dat -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles copying build/lib.linux-x86_64-3.6/prody/tests/datafiles/dcd2k39_truncated.dcd -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/kdtree copying build/lib.linux-x86_64-3.6/prody/tests/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/kdtree copying build/lib.linux-x86_64-3.6/prody/tests/kdtree/test_kdtree.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/kdtree creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-3.6/prody/tests/proteins/test_wwpdb.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-3.6/prody/tests/proteins/test_localpdb.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-3.6/prody/tests/proteins/test_dssp.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-3.6/prody/tests/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-3.6/prody/tests/proteins/test_header.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins copying build/lib.linux-x86_64-3.6/prody/tests/proteins/test_pdbfile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-3.6/prody/tests/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-3.6/prody/tests/trajectory/test_dcdfile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/trajectory copying build/lib.linux-x86_64-3.6/prody/tests/trajectory/test_frame.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/trajectory creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-3.6/prody/tests/utilities/test_pathtools.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-3.6/prody/tests/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-3.6/prody/tests/utilities/test_checkers.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities copying build/lib.linux-x86_64-3.6/prody/tests/utilities/test_misctools.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-3.6/prody/tests/dynamics/test_enms.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-3.6/prody/tests/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/dynamics copying build/lib.linux-x86_64-3.6/prody/tests/dynamics/test_editing.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/dynamics creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/kdtree copying build/lib.linux-x86_64-3.6/prody/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/kdtree copying build/lib.linux-x86_64-3.6/prody/kdtree/kdtree.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/kdtree copying build/lib.linux-x86_64-3.6/prody/kdtree/_CKDTree.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/kdtree creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin copying build/lib.linux-x86_64-3.6/prody/chromatin/norm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin copying build/lib.linux-x86_64-3.6/prody/chromatin/hic.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin copying build/lib.linux-x86_64-3.6/prody/chromatin/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin copying build/lib.linux-x86_64-3.6/prody/chromatin/cluster.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin copying build/lib.linux-x86_64-3.6/prody/chromatin/functions.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/compare.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/ciffile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/blastpdb.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/wwpdb.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/pdbclusters.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/pdbfile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/blastpdbUniProtKB.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/header.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/dssp.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/localpdb.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/functions.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/stride.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/emdfile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins copying build/lib.linux-x86_64-3.6/prody/proteins/pdbligands.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory copying build/lib.linux-x86_64-3.6/prody/trajectory/frame.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory copying build/lib.linux-x86_64-3.6/prody/trajectory/trajectory.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory copying build/lib.linux-x86_64-3.6/prody/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory copying build/lib.linux-x86_64-3.6/prody/trajectory/trajbase.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory copying build/lib.linux-x86_64-3.6/prody/trajectory/trajfile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory copying build/lib.linux-x86_64-3.6/prody/trajectory/psffile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory copying build/lib.linux-x86_64-3.6/prody/trajectory/dcdfile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities copying build/lib.linux-x86_64-3.6/prody/utilities/logger.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities copying build/lib.linux-x86_64-3.6/prody/utilities/doctools.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities copying build/lib.linux-x86_64-3.6/prody/utilities/pathtools.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities copying build/lib.linux-x86_64-3.6/prody/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities copying build/lib.linux-x86_64-3.6/prody/utilities/settings.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities copying build/lib.linux-x86_64-3.6/prody/utilities/misctools.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities copying build/lib.linux-x86_64-3.6/prody/utilities/checkers.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/compare.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/vmdfile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/pca.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/gnm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/heatmapper.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/modeset.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/nmdfile.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/gamma.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/nma.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/sampling.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/bbenm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/mode.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/analysis.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/smtools.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/rtb.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/rtbtools.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/editing.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/exanm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/functions.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/plotting.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics copying build/lib.linux-x86_64-3.6/prody/dynamics/anm.py -> /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble/ensemble.py to ensemble.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble/conformation.py to conformation.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble/pdbensemble.py to pdbensemble.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/ensemble/functions.py to functions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/atom.py to atom.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/bond.py to bond.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/fields.py to fields.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/segment.py to segment.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/flags.py to flags.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/atomgroup.py to atomgroup.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/residue.py to residue.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/selection.py to selection.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/chain.py to chain.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/functions.py to functions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/hierview.py to hierview.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/subset.py to subset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/pointer.py to pointer.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/atommap.py to atommap.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/select.py to select.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/atomic/atomic.py to atomic.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/msafile.py to msafile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/analysis.py to analysis.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/msa.py to msa.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/plotting.py to plotting.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py to sequence.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/apptools.py to apptools.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_select.py to prody_select.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_align.py to prody_align.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_fetch.py to prody_fetch.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_pca.py to prody_pca.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_gnm.py to prody_gnm.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_anm.py to prody_anm.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/nmaoptions.py to nmaoptions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_contacts.py to prody_contacts.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_catdcd.py to prody_catdcd.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_blast.py to prody_blast.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_biomol.py to prody_biomol.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/prody_apps/prody_eda.py to prody_eda.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_fetch.py to evol_fetch.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_merge.py to evol_merge.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_rankorder.py to evol_rankorder.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_coevol.py to evol_coevol.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_conserv.py to evol_conserv.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_search.py to evol_search.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_refine.py to evol_refine.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_occupancy.py to evol_occupancy.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/evol_apps/evol_filter.py to evol_filter.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/apps/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/database/pfam.py to pfam.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/database/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure/contacts.py to contacts.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure/measure.py to measure.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/measure/transform.py to transform.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble/test_pdbensemble.py to test_pdbensemble.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble/test_functions.py to test_functions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble/test_ensemble.py to test_ensemble.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/ensemble/test_conformation.py to test_conformation.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic/test_select.py to test_select.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic/test_atommap.py to test_atommap.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic/test_atomic.py to test_atomic.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic/test_hierview.py to test_hierview.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic/test_fragment.py to test_fragment.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/atomic/test_subset.py to test_subset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence/test_sequence.py to test_sequence.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence/test_msafile.py to test_msafile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence/test_msa.py to test_msa.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/sequence/test_analysis.py to test_analysis.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps/test_prody_catdcd.py to test_prody_catdcd.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps/test_prody_pca.py to test_prody_pca.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps/test_prody_anm.py to test_prody_anm.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps/test_prody_gnm.py to test_prody_gnm.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/apps/test_prody_examples.py to test_prody_examples.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure/test_measure.py to test_measure.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure/test_contacts.py to test_contacts.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/measure/test_transform.py to test_transform.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/datafiles/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/kdtree/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/kdtree/test_kdtree.py to test_kdtree.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins/test_wwpdb.py to test_wwpdb.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins/test_localpdb.py to test_localpdb.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins/test_dssp.py to test_dssp.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins/test_header.py to test_header.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/proteins/test_pdbfile.py to test_pdbfile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/trajectory/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/trajectory/test_dcdfile.py to test_dcdfile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/trajectory/test_frame.py to test_frame.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities/test_pathtools.py to test_pathtools.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities/test_checkers.py to test_checkers.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/utilities/test_misctools.py to test_misctools.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/dynamics/test_enms.py to test_enms.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/dynamics/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests/dynamics/test_editing.py to test_editing.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/kdtree/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/kdtree/kdtree.py to kdtree.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin/norm.py to norm.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin/hic.py to hic.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin/cluster.py to cluster.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/chromatin/functions.py to functions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/compare.py to compare.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/ciffile.py to ciffile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/blastpdb.py to blastpdb.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/wwpdb.py to wwpdb.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/pdbclusters.py to pdbclusters.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/pdbfile.py to pdbfile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/blastpdbUniProtKB.py to blastpdbUniProtKB.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/header.py to header.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/dssp.py to dssp.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/localpdb.py to localpdb.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/functions.py to functions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/stride.py to stride.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/emdfile.py to emdfile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/proteins/pdbligands.py to pdbligands.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory/frame.py to frame.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory/trajectory.py to trajectory.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory/trajbase.py to trajbase.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory/trajfile.py to trajfile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory/psffile.py to psffile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/trajectory/dcdfile.py to dcdfile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities/logger.py to logger.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities/doctools.py to doctools.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities/pathtools.py to pathtools.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities/settings.py to settings.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities/misctools.py to misctools.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/utilities/checkers.py to checkers.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/compare.py to compare.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/vmdfile.py to vmdfile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/pca.py to pca.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/gnm.py to gnm.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/heatmapper.py to heatmapper.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/modeset.py to modeset.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/nmdfile.py to nmdfile.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/gamma.py to gamma.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/nma.py to nma.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/sampling.py to sampling.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/bbenm.py to bbenm.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/mode.py to mode.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/analysis.py to analysis.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/rtb.py to rtb.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/editing.py to editing.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/exanm.py to exanm.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/functions.py to functions.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/plotting.py to plotting.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/anm.py to anm.cpython-36.pyc writing byte-compilation script '/tmp/tmp_p4gzrsk.py' /usr/bin/python3 /tmp/tmp_p4gzrsk.py removing /tmp/tmp_p4gzrsk.py running install_egg_info Writing /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/ProDy-1.9.3-py3.6.egg-info /usr/lib64/python3.6/distutils/dist.py:261: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) + mkdir -p /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + cd scripts + mv ./prody ./python3.6-prody + mv ./evol ./python3.6-evol + for i in prody-3 prody-3.6 + touch -r ./python3.6-prody prody-3 + install -p prody-3 /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + install -p ./python3.6-prody /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + ln -sf /usr/bin/python3.6-prody /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin/prody-3 + for i in prody-3 prody-3.6 + touch -r ./python3.6-prody prody-3.6 + install -p prody-3.6 /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + install -p ./python3.6-prody /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + ln -sf /usr/bin/python3.6-prody /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin/prody-3.6 + for i in evol-3 evol-3.6 + touch -r ./python3.6-evol evol-3 + install -p evol-3 /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + install -p ./python3.6-evol /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + ln -sf /usr/bin/python3.6-evol /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin/evol-3 + for i in evol-3 evol-3.6 + touch -r ./python3.6-evol evol-3.6 + install -p evol-3.6 /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + install -p ./python3.6-evol /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin + ln -sf /usr/bin/python3.6-evol /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/bin/evol-3.6 + cd .. + /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 /builddir/build/BUILD/ProDy-1.9.3 extracting debug info from /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/seqtools.cpython-36m-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/msatools.cpython-36m-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/msaio.cpython-36m-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/kdtree/_CKDTree.cpython-36m-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/smtools.cpython-36m-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/dynamics/rtbtools.cpython-36m-x86_64-linux-gnu.so /usr/lib/rpm/sepdebugcrcfix: Updated 6 CRC32s, 0 CRC32s did match. 324 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6 using /usr/bin/python3.6 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib/debug/usr/lib64/python3.6 using /usr/bin/python3.6 + /usr/lib/rpm/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.rPV4Si + umask 022 + cd /builddir/build/BUILD + cd ProDy-1.9.3 + pushd python3/scripts ~/build/BUILD/ProDy-1.9.3/python3/scripts ~/build/BUILD/ProDy-1.9.3 + PYTHONPATH=/builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages + nosetests-3.6 --verbosity=2 -e test_atomic.py -e test_pdbfile.py -e test_measure.py -e test_wwpdb.py -e test_localpdb.py -e test_msafile.py -e test_pathtools.py -e test_select.py -e test_dcdfile.py -e test_enms.py -w /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/tests --tests prody -a '!slow' testInstantiation (prody.tests.atomic.test_atommap.TestInstantiation) ... ok testAllSelection (prody.tests.atomic.test_atommap.TestSelection) ... ok testChainSelection (prody.tests.atomic.test_atommap.TestSelection) ... ok testGetBoolArray (prody.tests.atomic.test_atommap.TestSelection) ... ok testNameSelection (prody.tests.atomic.test_atommap.TestSelection) ... ok testSplit (prody.tests.atomic.test_fragment.TestFragment) ... ok testSplitCopy (prody.tests.atomic.test_fragment.TestFragment) ... ok testSplitNoh (prody.tests.atomic.test_fragment.TestFragment) ... ok testSplitNohCopy (prody.tests.atomic.test_fragment.TestFragment) ... ok testWhole (prody.tests.atomic.test_fragment.TestFragment) ... ok testWhole2 (prody.tests.atomic.test_fragment.TestFragment) ... ok testWholeAll (prody.tests.atomic.test_fragment.TestFragment) ... ok testWholeCopy (prody.tests.atomic.test_fragment.TestFragment) ... ok testWholeNoh (prody.tests.atomic.test_fragment.TestFragment) ... ok testWholeNohCopy (prody.tests.atomic.test_fragment.TestFragment) ... ok testCA (prody.tests.atomic.test_hierview.TestShuffled) ... ok testProtein (prody.tests.atomic.test_hierview.TestShuffled) ... ok testNumResidues (prody.tests.atomic.test_hierview.TestTerRecord) ... ok testResidueIndexing (prody.tests.atomic.test_hierview.TestTerRecord) ... ok testSelectionResidueIndexing (prody.tests.atomic.test_hierview.TestTerRecord) ... ok testSelectionResidueIndexing2 (prody.tests.atomic.test_hierview.TestTerRecord) ... ok testSetData (prody.tests.atomic.test_subset.TestUserData) ... ok testMode1d (prody.tests.dynamics.test_editing.TestExtending) ... ok testMode3d (prody.tests.dynamics.test_editing.TestExtending) ... ok testModel1d (prody.tests.dynamics.test_editing.TestExtending) ... ok testModel3d (prody.tests.dynamics.test_editing.TestExtending) ... ok testVector1d (prody.tests.dynamics.test_editing.TestExtending) ... ok testVector3d (prody.tests.dynamics.test_editing.TestExtending) ... ok testCoordinates (prody.tests.ensemble.test_conformation.TestConformation) ... ok testCoordinatesForAll (prody.tests.ensemble.test_conformation.TestConformation) ... ok Test get index function. ... ok Test get index function. ... ok testWeights (prody.tests.ensemble.test_conformation.TestConformation) ... ok testCoordinates (prody.tests.ensemble.test_conformation.TestPDBConformation) ... ok testCoordinatesForAll (prody.tests.ensemble.test_conformation.TestPDBConformation) ... ok testGetIndex (prody.tests.ensemble.test_conformation.TestPDBConformation) ... ok testGetNumAtoms (prody.tests.ensemble.test_conformation.TestPDBConformation) ... ok testWeights (prody.tests.ensemble.test_conformation.TestPDBConformation) ... ok testWeightsForAll (prody.tests.ensemble.test_conformation.TestPDBConformation) ... ok Test concatenation of ensembles without weights. ... ok Test concatenation of ensembles without and with weights. ... ok Test concatenation of ensembles with weights. ... ok Test concatenation of ensembles with and without weights. ... ok testDelCoordsetAll (prody.tests.ensemble.test_ensemble.TestEnsemble) ... ok testDelCoordsetMiddle (prody.tests.ensemble.test_ensemble.TestEnsemble) ... ok Test correctness of reference coordinates. ... ok Test correctness of all coordinates. ... ok testGetNumAtoms (prody.tests.ensemble.test_ensemble.TestEnsemble) ... ok testGetNumCsets (prody.tests.ensemble.test_ensemble.TestEnsemble) ... ok testGetRMSDs (prody.tests.ensemble.test_ensemble.TestEnsemble) ... ok testGetRMSDsWeights (prody.tests.ensemble.test_ensemble.TestEnsemble) ... ok Test correctness of all weights. ... ok Test coordinate iteration. ... ok Test slicing operation. ... ok Test making a copy by slicing operation. ... ok Test slicing with a list. ... ok Test slicing operation with weights. ... ok testSuperpose (prody.tests.ensemble.test_ensemble.TestEnsemble) ... ok testSuperposeWeights (prody.tests.ensemble.test_ensemble.TestEnsemble) ... ok testInvalidType (prody.tests.ensemble.test_functions.TestCalcOccupancies) ... ok testResults (prody.tests.ensemble.test_functions.TestCalcOccupancies) ... ok testWeightsNone (prody.tests.ensemble.test_functions.TestCalcOccupancies) ... ok Test concatenation of PDB ensembles. ... ok Test consequences of deleting all coordinate sets. ... ok testDelCoordsetMiddle (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testGetCoordinates (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testGetCoordsets (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testGetNumAtoms (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testGetNumCsets (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testGetWeights (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testIterCoordsets (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testSlicing (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testSlicingCopy (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testSlicingList (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testSlicingWeights (prody.tests.ensemble.test_pdbensemble.TestPDBEnsemble) ... ok testAllSearch (prody.tests.kdtree.test_kdtree.TestKDTree) ... ok testSearch (prody.tests.kdtree.test_kdtree.TestKDTree) ... ok testPairNoPBC (prody.tests.kdtree.test_kdtree.TestKDTreePBC) ... ok testPairPBC (prody.tests.kdtree.test_kdtree.TestKDTreePBC) ... ok testPointNoPBC (prody.tests.kdtree.test_kdtree.TestKDTreePBC) ... ok testPointPBC (prody.tests.kdtree.test_kdtree.TestKDTreePBC) ... ok testMINvsMAX (prody.tests.measure.test_contacts.TestContacts) ... ok testPBCvsNONE (prody.tests.measure.test_contacts.TestContacts) ... ok testAtomicArgumentSwitching (prody.tests.measure.test_contacts.TestNeighbors) ... ok testCoordArgumentSwitching (prody.tests.measure.test_contacts.TestNeighbors) ... ok testNoPBC (prody.tests.measure.test_contacts.TestNeighbors) ... ok testPBC (prody.tests.measure.test_contacts.TestNeighbors) ... ok testPBCAtomicArgumentSwitching (prody.tests.measure.test_contacts.TestNeighbors) ... ok testPBCCoordArgumentSwitching (prody.tests.measure.test_contacts.TestNeighbors) ... ok testByArgument (prody.tests.measure.test_transform.TestMoveAtoms) ... ok testToArgument (prody.tests.measure.test_transform.TestMoveAtoms) ... ok testTransformation (prody.tests.measure.test_transform.TestMoveAtoms) ... ok testWrap (prody.tests.measure.test_transform.TestWrapAtoms) ... ok testHeaderContent (prody.tests.proteins.test_header.TestParsePDBHeaderOnly) ... ok testHeaderType (prody.tests.proteins.test_header.TestParsePDBHeaderOnly) ... ok testResidueCount (prody.tests.sequence.test_analysis.TestCalcMSAOccupancy) ... ok testResidueOccupancy (prody.tests.sequence.test_analysis.TestCalcMSAOccupancy) ... ok testSequenceCount (prody.tests.sequence.test_analysis.TestCalcMSAOccupancy) ... ok testSequenceOccupancy (prody.tests.sequence.test_analysis.TestCalcMSAOccupancy) ... ok testMATLAB (prody.tests.sequence.test_analysis.TestCalcMeff) ... ok testTwenty (prody.tests.sequence.test_analysis.TestCalcMeff) ... ok testTwentyReversed (prody.tests.sequence.test_analysis.TestCalcMeff) ... ok testZero1 (prody.tests.sequence.test_analysis.TestCalcMeff) ... ok testZero2 (prody.tests.sequence.test_analysis.TestCalcMeff) ... ok testAmbiguity (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testAmbiguity2 (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testAmbiguity3 (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testAmbiguity4 (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testAmbiguity5 (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testAmbiguity6 (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testAmbiguity7 (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testInf (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testNoAmbiguity (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testNorm (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testNorm2 (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testSixSequences (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testTwenty (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testTwentyReversed (prody.tests.sequence.test_analysis.TestCalcMutualInfo) ... ok testAmbiguity (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testAmbiguity2 (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testAmbiguity3 (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testAmbiguity4 (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testAmbiguity5 (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testAmbiguity6 (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testAmbiguity7 (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testFourSequences (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testInf (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testNoAmbiguity (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testTwenty (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testTwentyReversed (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testZero (prody.tests.sequence.test_analysis.TestCalcOMES) ... ok testMATLAB (prody.tests.sequence.test_analysis.TestCalcSCA) ... /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py:25: FutureWarning: split() requires a non-empty pattern match. idcode, start, end = SPLITLABEL(label) ok testZero (prody.tests.sequence.test_analysis.TestCalcSCA) ... ok testAmbiguous (prody.tests.sequence.test_analysis.TestCalcShannonEntropy) ... ok testGapDividend (prody.tests.sequence.test_analysis.TestCalcShannonEntropy) ... ok testSixSequences (prody.tests.sequence.test_analysis.TestCalcShannonEntropy) ... ok testSmallProbability (prody.tests.sequence.test_analysis.TestCalcShannonEntropy) ... ok testTwenty (prody.tests.sequence.test_analysis.TestCalcShannonEntropy) ... ok testMATLAB10 (prody.tests.sequence.test_analysis.TestDirectInfo) ... /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py:25: FutureWarning: split() requires a non-empty pattern match. idcode, start, end = SPLITLABEL(label) ok testMATLAB8 (prody.tests.sequence.test_analysis.TestDirectInfo) ... /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py:25: FutureWarning: split() requires a non-empty pattern match. idcode, start, end = SPLITLABEL(label) ok testTwenty (prody.tests.sequence.test_analysis.TestDirectInfo) ... ok testTwentyReversed (prody.tests.sequence.test_analysis.TestDirectInfo) ... ok testZero (prody.tests.sequence.test_analysis.TestDirectInfo) ... ok testZero1 (prody.tests.sequence.test_analysis.TestDirectInfo) ... ok testZero2 (prody.tests.sequence.test_analysis.TestDirectInfo) ... ok testZero3 (prody.tests.sequence.test_analysis.TestDirectInfo) ... ok testZero4 (prody.tests.sequence.test_analysis.TestDirectInfo) ... ok testIdentityMatrix (prody.tests.sequence.test_analysis.TestIdentity) ... ok testIdentityMatrixNonTurbo (prody.tests.sequence.test_analysis.TestIdentity) ... ok testUnique (prody.tests.sequence.test_analysis.TestUnique) ... ok testUnique2 (prody.tests.sequence.test_analysis.TestUnique) ... ok testMerge (prody.tests.sequence.test_msa.TestMerging) ... /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py:25: FutureWarning: split() requires a non-empty pattern match. idcode, start, end = SPLITLABEL(label) ok testAll (prody.tests.sequence.test_msa.TestRefinement) ... ok testColocc (prody.tests.sequence.test_msa.TestRefinement) ... ok testLabel (prody.tests.sequence.test_msa.TestRefinement) ... ok testRowCol (prody.tests.sequence.test_msa.TestRefinement) ... /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py:25: FutureWarning: split() requires a non-empty pattern match. idcode, start, end = SPLITLABEL(label) ok testRowocc (prody.tests.sequence.test_msa.TestRefinement) ... /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py:25: FutureWarning: split() requires a non-empty pattern match. idcode, start, end = SPLITLABEL(label) ok testSeqid (prody.tests.sequence.test_msa.TestRefinement) ... /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py:25: FutureWarning: split() requires a non-empty pattern match. idcode, start, end = SPLITLABEL(label) ok testSeqidLabel (prody.tests.sequence.test_msa.TestRefinement) ... /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/lib64/python3.6/site-packages/prody/sequence/sequence.py:25: FutureWarning: split() requires a non-empty pattern match. idcode, start, end = SPLITLABEL(label) ok testStringConversion (prody.tests.sequence.test_sequence.TestSequence) ... ok testAll (prody.tests.trajectory.test_frame.TestSuperpose) ... ok testCarbon (prody.tests.trajectory.test_frame.TestSuperpose) ... ok testCoords (prody.tests.utilities.test_checkers.TestCheckCoords) ... ok testCoordset (prody.tests.utilities.test_checkers.TestCheckCoords) ... ok testCoordsetNatoms (prody.tests.utilities.test_checkers.TestCheckCoords) ... ok testInvalidCoords (prody.tests.utilities.test_checkers.TestCheckCoords) ... ok testCorrectMonotypeOneArg (prody.tests.utilities.test_checkers.testCheckTypes) ... ok testCorrectMonotypeTwoArgs (prody.tests.utilities.test_checkers.testCheckTypes) ... ok testCorrectMultitypeOneArg (prody.tests.utilities.test_checkers.testCheckTypes) ... ok testWrongMonotypeOneArg (prody.tests.utilities.test_checkers.testCheckTypes) ... ok testWrongMonotypeTwoArgs (prody.tests.utilities.test_checkers.testCheckTypes) ... ok testWrongMultitypeOneArg (prody.tests.utilities.test_checkers.testCheckTypes) ... ok testContinuous (prody.tests.utilities.test_misctools.TestRangeString) ... ok testGapped (prody.tests.utilities.test_misctools.TestRangeString) ... ok testNegative (prody.tests.utilities.test_misctools.TestRangeString) ... ok testRepeated (prody.tests.utilities.test_misctools.TestRangeString) ... ok ---------------------------------------------------------------------- Ran 176 tests in 1.302s OK ~/build/BUILD/ProDy-1.9.3 + popd + exit 0 Processing files: python3-ProDy-1.9.3-1.fc26.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.3CGzLk + umask 022 + cd /builddir/build/BUILD + cd ProDy-1.9.3 + DOCDIR=/builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/share/doc/python3-ProDy + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/share/doc/python3-ProDy + cp -pr python3/README.rst /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/share/doc/python3-ProDy + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.wbCREm + umask 022 + cd /builddir/build/BUILD + cd ProDy-1.9.3 + LICENSEDIR=/builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/share/licenses/python3-ProDy + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/share/licenses/python3-ProDy + cp -pr python3/LICENSE.rst /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64/usr/share/licenses/python3-ProDy + exit 0 Provides: python3-ProDy = 1.9.3-1.fc26 python3-ProDy(x86-64) = 1.9.3-1.fc26 python3.6dist(prody) = 1.9.3 python3dist(prody) = 1.9.3 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/env libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libpthread.so.0()(64bit) libpython3.6m.so.1.0()(64bit) python(abi) = 3.6 rtld(GNU_HASH) Processing files: ProDy-debuginfo-1.9.3-1.fc26.x86_64 Provides: ProDy-debuginfo = 1.9.3-1.fc26 ProDy-debuginfo(x86-64) = 1.9.3-1.fc26 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64 Wrote: /builddir/build/RPMS/python3-ProDy-1.9.3-1.fc26.x86_64.rpm Wrote: /builddir/build/RPMS/ProDy-debuginfo-1.9.3-1.fc26.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.7KWlzt + umask 022 + cd /builddir/build/BUILD + cd ProDy-1.9.3 + /usr/bin/rm -rf /builddir/build/BUILDROOT/ProDy-1.9.3-1.fc26.x86_64 + exit 0 Child return code was: 0