Mock Version: 1.1.18 Mock Version: 1.1.18 ENTER do(['bash', '--login', '-c', 'rpmbuild -bs --target i686 --nodeps builddir/build/SPECS/python-biopython.spec'], False, '/var/lib/mock/dist-f15-build-1292883-205794/root/', None, 86400, True, False, 419, 494, None, False, None, logger=) Executing command: ['bash', '--login', '-c', 'rpmbuild -bs --target i686 --nodeps builddir/build/SPECS/python-biopython.spec'] sh: /usr/bin/python: No such file or directory sh: /usr/bin/python: No such file or directory sh: /usr/bin/python: No such file or directory sh: /usr/bin/python: No such file or directory sh: /usr/bin/python: No such file or directory warning: Could not canonicalize hostname: x86-02.phx2.fedoraproject.org Building target platforms: i686 Building for target i686 Wrote: /builddir/build/SRPMS/python-biopython-1.59-1.fc15.src.rpm Child returncode was: 0 LEAVE do --> ENTER do(['bash', '--login', '-c', 'rpmbuild -bb --target i686 --nodeps builddir/build/SPECS/python-biopython.spec'], False, '/var/lib/mock/dist-f15-build-1292883-205794/root/', None, 86400, True, False, 419, 494, None, False, None, logger=) Executing command: ['bash', '--login', '-c', 'rpmbuild -bb --target i686 --nodeps builddir/build/SPECS/python-biopython.spec'] Building target platforms: i686 Building for target i686 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.N04rFa + umask 022 + cd /builddir/build/BUILD + LANG=C + export LANG + unset DISPLAY + cd /builddir/build/BUILD + rm -rf biopython-1.59 + /usr/bin/gzip -dc /builddir/build/SOURCES/biopython-1.59.tar.gz + /bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + cd biopython-1.59 + /bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (python-biopython-1.51-enable-flex.patch):' Patch #0 (python-biopython-1.51-enable-flex.patch): + /bin/cat /builddir/build/SOURCES/python-biopython-1.51-enable-flex.patch + /usr/bin/patch -s -p0 --fuzz=0 + find Scripts -type f -exec chmod -x '{}' ';' + find Doc -type f -exec chmod -x '{}' ';' + find Doc -type f -exec sed -i 's/\r//' '{}' ';' + find Bio -type f -exec chmod -x '{}' ';' + find Bio -type f -name '*.py' -exec sed -i '/^#![ ]*\/usr\/bin\/.*$/ d' '{}' ';' + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.xPkbSj + umask 022 + cd /builddir/build/BUILD + cd biopython-1.59 + LANG=C + export LANG + unset DISPLAY + env 'CFLAGS=-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' /usr/bin/python setup.py build running build running build_py creating build creating build/lib.linux-i686-2.7 creating build/lib.linux-i686-2.7/Bio copying Bio/SeqFeature.py -> build/lib.linux-i686-2.7/Bio copying Bio/LogisticRegression.py -> build/lib.linux-i686-2.7/Bio copying Bio/Index.py -> build/lib.linux-i686-2.7/Bio copying Bio/_py3k.py -> build/lib.linux-i686-2.7/Bio copying Bio/pairwise2.py -> build/lib.linux-i686-2.7/Bio copying Bio/SeqRecord.py -> build/lib.linux-i686-2.7/Bio copying Bio/MaxEntropy.py -> build/lib.linux-i686-2.7/Bio copying Bio/ParserSupport.py -> build/lib.linux-i686-2.7/Bio copying Bio/MarkovModel.py -> build/lib.linux-i686-2.7/Bio copying Bio/__init__.py -> build/lib.linux-i686-2.7/Bio copying Bio/triefind.py -> build/lib.linux-i686-2.7/Bio copying Bio/File.py -> build/lib.linux-i686-2.7/Bio copying Bio/DocSQL.py -> build/lib.linux-i686-2.7/Bio copying Bio/HotRand.py -> build/lib.linux-i686-2.7/Bio copying Bio/Seq.py -> build/lib.linux-i686-2.7/Bio copying Bio/kNN.py -> build/lib.linux-i686-2.7/Bio copying Bio/Search.py -> build/lib.linux-i686-2.7/Bio copying Bio/NaiveBayes.py -> build/lib.linux-i686-2.7/Bio creating build/lib.linux-i686-2.7/Bio/Align copying Bio/Align/__init__.py -> build/lib.linux-i686-2.7/Bio/Align copying Bio/Align/Generic.py -> build/lib.linux-i686-2.7/Bio/Align copying Bio/Align/AlignInfo.py -> build/lib.linux-i686-2.7/Bio/Align creating build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-i686-2.7/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-i686-2.7/Bio/Align/Applications creating build/lib.linux-i686-2.7/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-i686-2.7/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-i686-2.7/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-i686-2.7/Bio/AlignIO copying Bio/AlignIO/__init__.py -> build/lib.linux-i686-2.7/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-i686-2.7/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-i686-2.7/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-i686-2.7/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-i686-2.7/Bio/AlignIO creating build/lib.linux-i686-2.7/Bio/Alphabet copying Bio/Alphabet/IUPAC.py -> build/lib.linux-i686-2.7/Bio/Alphabet copying Bio/Alphabet/__init__.py -> build/lib.linux-i686-2.7/Bio/Alphabet copying Bio/Alphabet/Reduced.py -> build/lib.linux-i686-2.7/Bio/Alphabet creating build/lib.linux-i686-2.7/Bio/Application copying Bio/Application/__init__.py -> build/lib.linux-i686-2.7/Bio/Application creating build/lib.linux-i686-2.7/Bio/Blast copying Bio/Blast/NCBIWWW.py -> build/lib.linux-i686-2.7/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> build/lib.linux-i686-2.7/Bio/Blast copying Bio/Blast/__init__.py -> build/lib.linux-i686-2.7/Bio/Blast copying Bio/Blast/Applications.py -> build/lib.linux-i686-2.7/Bio/Blast copying Bio/Blast/Record.py -> build/lib.linux-i686-2.7/Bio/Blast copying Bio/Blast/NCBIStandalone.py -> build/lib.linux-i686-2.7/Bio/Blast copying Bio/Blast/NCBIXML.py -> build/lib.linux-i686-2.7/Bio/Blast creating build/lib.linux-i686-2.7/Bio/CAPS copying Bio/CAPS/__init__.py -> build/lib.linux-i686-2.7/Bio/CAPS creating build/lib.linux-i686-2.7/Bio/Compass copying Bio/Compass/__init__.py -> build/lib.linux-i686-2.7/Bio/Compass creating build/lib.linux-i686-2.7/Bio/Crystal copying Bio/Crystal/__init__.py -> build/lib.linux-i686-2.7/Bio/Crystal creating build/lib.linux-i686-2.7/Bio/Data copying Bio/Data/__init__.py -> build/lib.linux-i686-2.7/Bio/Data copying Bio/Data/IUPACData.py -> build/lib.linux-i686-2.7/Bio/Data copying Bio/Data/CodonTable.py -> build/lib.linux-i686-2.7/Bio/Data creating build/lib.linux-i686-2.7/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-i686-2.7/Bio/Emboss copying Bio/Emboss/__init__.py -> build/lib.linux-i686-2.7/Bio/Emboss copying Bio/Emboss/Applications.py -> build/lib.linux-i686-2.7/Bio/Emboss copying Bio/Emboss/Primer3.py -> build/lib.linux-i686-2.7/Bio/Emboss creating build/lib.linux-i686-2.7/Bio/Entrez copying Bio/Entrez/Parser.py -> build/lib.linux-i686-2.7/Bio/Entrez copying Bio/Entrez/__init__.py -> build/lib.linux-i686-2.7/Bio/Entrez creating build/lib.linux-i686-2.7/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-i686-2.7/Bio/ExPASy copying Bio/ExPASy/__init__.py -> build/lib.linux-i686-2.7/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> build/lib.linux-i686-2.7/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> build/lib.linux-i686-2.7/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> build/lib.linux-i686-2.7/Bio/ExPASy creating build/lib.linux-i686-2.7/Bio/FSSP copying Bio/FSSP/__init__.py -> build/lib.linux-i686-2.7/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> build/lib.linux-i686-2.7/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> build/lib.linux-i686-2.7/Bio/FSSP creating build/lib.linux-i686-2.7/Bio/GA copying Bio/GA/__init__.py -> build/lib.linux-i686-2.7/Bio/GA copying Bio/GA/Evolver.py -> build/lib.linux-i686-2.7/Bio/GA copying Bio/GA/Organism.py -> build/lib.linux-i686-2.7/Bio/GA creating build/lib.linux-i686-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/General.py -> build/lib.linux-i686-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/__init__.py -> build/lib.linux-i686-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/Uniform.py -> build/lib.linux-i686-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/Point.py -> build/lib.linux-i686-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/TwoPoint.py -> build/lib.linux-i686-2.7/Bio/GA/Crossover copying Bio/GA/Crossover/GeneralPoint.py -> build/lib.linux-i686-2.7/Bio/GA/Crossover creating build/lib.linux-i686-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/General.py -> build/lib.linux-i686-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/__init__.py -> build/lib.linux-i686-2.7/Bio/GA/Mutation copying Bio/GA/Mutation/Simple.py -> build/lib.linux-i686-2.7/Bio/GA/Mutation creating build/lib.linux-i686-2.7/Bio/GA/Repair copying Bio/GA/Repair/__init__.py -> build/lib.linux-i686-2.7/Bio/GA/Repair copying Bio/GA/Repair/Stabilizing.py -> build/lib.linux-i686-2.7/Bio/GA/Repair creating build/lib.linux-i686-2.7/Bio/GA/Selection copying Bio/GA/Selection/RouletteWheel.py -> build/lib.linux-i686-2.7/Bio/GA/Selection copying Bio/GA/Selection/Abstract.py -> build/lib.linux-i686-2.7/Bio/GA/Selection copying Bio/GA/Selection/__init__.py -> build/lib.linux-i686-2.7/Bio/GA/Selection copying Bio/GA/Selection/Tournament.py -> build/lib.linux-i686-2.7/Bio/GA/Selection copying Bio/GA/Selection/Diversity.py -> build/lib.linux-i686-2.7/Bio/GA/Selection creating build/lib.linux-i686-2.7/Bio/GenBank copying Bio/GenBank/Scanner.py -> build/lib.linux-i686-2.7/Bio/GenBank copying Bio/GenBank/__init__.py -> build/lib.linux-i686-2.7/Bio/GenBank copying Bio/GenBank/Record.py -> build/lib.linux-i686-2.7/Bio/GenBank copying Bio/GenBank/utils.py -> build/lib.linux-i686-2.7/Bio/GenBank creating build/lib.linux-i686-2.7/Bio/Geo copying Bio/Geo/__init__.py -> build/lib.linux-i686-2.7/Bio/Geo copying Bio/Geo/Record.py -> build/lib.linux-i686-2.7/Bio/Geo creating build/lib.linux-i686-2.7/Bio/Graphics copying Bio/Graphics/__init__.py -> build/lib.linux-i686-2.7/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-i686-2.7/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-i686-2.7/Bio/Graphics copying Bio/Graphics/Distribution.py -> build/lib.linux-i686-2.7/Bio/Graphics copying Bio/Graphics/Comparative.py -> build/lib.linux-i686-2.7/Bio/Graphics creating build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram creating build/lib.linux-i686-2.7/Bio/HMM copying Bio/HMM/MarkovModel.py -> build/lib.linux-i686-2.7/Bio/HMM copying Bio/HMM/__init__.py -> build/lib.linux-i686-2.7/Bio/HMM copying Bio/HMM/Trainer.py -> build/lib.linux-i686-2.7/Bio/HMM copying Bio/HMM/Utilities.py -> build/lib.linux-i686-2.7/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-i686-2.7/Bio/HMM creating build/lib.linux-i686-2.7/Bio/KEGG copying Bio/KEGG/__init__.py -> build/lib.linux-i686-2.7/Bio/KEGG creating build/lib.linux-i686-2.7/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-i686-2.7/Bio/KEGG/Compound creating build/lib.linux-i686-2.7/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-i686-2.7/Bio/KEGG/Enzyme creating build/lib.linux-i686-2.7/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> build/lib.linux-i686-2.7/Bio/KEGG/Map creating build/lib.linux-i686-2.7/Bio/Medline copying Bio/Medline/__init__.py -> build/lib.linux-i686-2.7/Bio/Medline creating build/lib.linux-i686-2.7/Bio/Motif copying Bio/Motif/_Motif.py -> build/lib.linux-i686-2.7/Bio/Motif copying Bio/Motif/Thresholds.py -> build/lib.linux-i686-2.7/Bio/Motif copying Bio/Motif/__init__.py -> build/lib.linux-i686-2.7/Bio/Motif creating build/lib.linux-i686-2.7/Bio/Motif/Parsers copying Bio/Motif/Parsers/__init__.py -> build/lib.linux-i686-2.7/Bio/Motif/Parsers copying Bio/Motif/Parsers/AlignAce.py -> build/lib.linux-i686-2.7/Bio/Motif/Parsers copying Bio/Motif/Parsers/MAST.py -> build/lib.linux-i686-2.7/Bio/Motif/Parsers copying Bio/Motif/Parsers/MEME.py -> build/lib.linux-i686-2.7/Bio/Motif/Parsers creating build/lib.linux-i686-2.7/Bio/Motif/Applications copying Bio/Motif/Applications/__init__.py -> build/lib.linux-i686-2.7/Bio/Motif/Applications copying Bio/Motif/Applications/_AlignAce.py -> build/lib.linux-i686-2.7/Bio/Motif/Applications creating build/lib.linux-i686-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/Training.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/__init__.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork copying Bio/NeuralNetwork/StopTraining.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork creating build/lib.linux-i686-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/__init__.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Network.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork/BackPropagation copying Bio/NeuralNetwork/BackPropagation/Layer.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork/BackPropagation creating build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Pattern.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/__init__.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Schema.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Motif.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene copying Bio/NeuralNetwork/Gene/Signature.py -> build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene creating build/lib.linux-i686-2.7/Bio/Nexus copying Bio/Nexus/__init__.py -> build/lib.linux-i686-2.7/Bio/Nexus copying Bio/Nexus/Nexus.py -> build/lib.linux-i686-2.7/Bio/Nexus copying Bio/Nexus/Nodes.py -> build/lib.linux-i686-2.7/Bio/Nexus copying Bio/Nexus/Trees.py -> build/lib.linux-i686-2.7/Bio/Nexus creating build/lib.linux-i686-2.7/Bio/NMR copying Bio/NMR/xpktools.py -> build/lib.linux-i686-2.7/Bio/NMR copying Bio/NMR/__init__.py -> build/lib.linux-i686-2.7/Bio/NMR copying Bio/NMR/NOEtools.py -> build/lib.linux-i686-2.7/Bio/NMR creating build/lib.linux-i686-2.7/Bio/Pathway copying Bio/Pathway/__init__.py -> build/lib.linux-i686-2.7/Bio/Pathway creating build/lib.linux-i686-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-i686-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-i686-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/HashSet.py -> build/lib.linux-i686-2.7/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-i686-2.7/Bio/Pathway/Rep creating build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/FragmentMapper.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Model.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/StructureBuilder.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Selection.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/NACCESS.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Polypeptide.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Dice.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/PDBExceptions.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/PDBList.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/__init__.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Residue.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/NeighborSearch.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/HSExposure.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Atom.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Structure.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/PSEA.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Chain.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/PDBParser.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/DSSP.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/PDBIO.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/MMCIFParser.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/ResidueDepth.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Superimposer.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Entity.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/StructureAlignment.py -> build/lib.linux-i686-2.7/Bio/PDB copying Bio/PDB/Vector.py -> build/lib.linux-i686-2.7/Bio/PDB creating build/lib.linux-i686-2.7/Bio/PDB/mmCIF copying Bio/PDB/mmCIF/__init__.py -> build/lib.linux-i686-2.7/Bio/PDB/mmCIF creating build/lib.linux-i686-2.7/Bio/PopGen copying Bio/PopGen/__init__.py -> build/lib.linux-i686-2.7/Bio/PopGen creating build/lib.linux-i686-2.7/Bio/PopGen/Async copying Bio/PopGen/Async/Local.py -> build/lib.linux-i686-2.7/Bio/PopGen/Async copying Bio/PopGen/Async/__init__.py -> build/lib.linux-i686-2.7/Bio/PopGen/Async creating build/lib.linux-i686-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/__init__.py -> build/lib.linux-i686-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Utils.py -> build/lib.linux-i686-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Async.py -> build/lib.linux-i686-2.7/Bio/PopGen/FDist copying Bio/PopGen/FDist/Controller.py -> build/lib.linux-i686-2.7/Bio/PopGen/FDist creating build/lib.linux-i686-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-i686-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-i686-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-i686-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-i686-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Utils.py -> build/lib.linux-i686-2.7/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-i686-2.7/Bio/PopGen/GenePop creating build/lib.linux-i686-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Cache.py -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/__init__.py -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Template.py -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Async.py -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal copying Bio/PopGen/SimCoal/Controller.py -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal creating build/lib.linux-i686-2.7/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> build/lib.linux-i686-2.7/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-i686-2.7/Bio/Restriction copying Bio/Restriction/__init__.py -> build/lib.linux-i686-2.7/Bio/Restriction copying Bio/Restriction/Restriction.py -> build/lib.linux-i686-2.7/Bio/Restriction copying Bio/Restriction/RanaConfig.py -> build/lib.linux-i686-2.7/Bio/Restriction creating build/lib.linux-i686-2.7/Bio/Restriction/_Update copying Bio/Restriction/_Update/RestrictionCompiler.py -> build/lib.linux-i686-2.7/Bio/Restriction/_Update copying Bio/Restriction/_Update/__init__.py -> build/lib.linux-i686-2.7/Bio/Restriction/_Update copying Bio/Restriction/_Update/Update.py -> build/lib.linux-i686-2.7/Bio/Restriction/_Update creating build/lib.linux-i686-2.7/Bio/SCOP copying Bio/SCOP/Cla.py -> build/lib.linux-i686-2.7/Bio/SCOP copying Bio/SCOP/__init__.py -> build/lib.linux-i686-2.7/Bio/SCOP copying Bio/SCOP/Hie.py -> build/lib.linux-i686-2.7/Bio/SCOP copying Bio/SCOP/Des.py -> build/lib.linux-i686-2.7/Bio/SCOP copying Bio/SCOP/Dom.py -> build/lib.linux-i686-2.7/Bio/SCOP copying Bio/SCOP/Raf.py -> build/lib.linux-i686-2.7/Bio/SCOP copying Bio/SCOP/Residues.py -> build/lib.linux-i686-2.7/Bio/SCOP creating build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/__init__.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/_index.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/_convert.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-i686-2.7/Bio/SeqIO creating build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> build/lib.linux-i686-2.7/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> build/lib.linux-i686-2.7/Bio/SeqUtils creating build/lib.linux-i686-2.7/Bio/Sequencing copying Bio/Sequencing/__init__.py -> build/lib.linux-i686-2.7/Bio/Sequencing copying Bio/Sequencing/Ace.py -> build/lib.linux-i686-2.7/Bio/Sequencing copying Bio/Sequencing/Phd.py -> build/lib.linux-i686-2.7/Bio/Sequencing creating build/lib.linux-i686-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-i686-2.7/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-i686-2.7/Bio/Sequencing/Applications creating build/lib.linux-i686-2.7/Bio/Statistics copying Bio/Statistics/lowess.py -> build/lib.linux-i686-2.7/Bio/Statistics copying Bio/Statistics/__init__.py -> build/lib.linux-i686-2.7/Bio/Statistics creating build/lib.linux-i686-2.7/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> build/lib.linux-i686-2.7/Bio/SubsMat copying Bio/SubsMat/__init__.py -> build/lib.linux-i686-2.7/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> build/lib.linux-i686-2.7/Bio/SubsMat creating build/lib.linux-i686-2.7/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-i686-2.7/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/SVDSuperimposer.py -> build/lib.linux-i686-2.7/Bio/SVDSuperimposer creating build/lib.linux-i686-2.7/Bio/SwissProt copying Bio/SwissProt/__init__.py -> build/lib.linux-i686-2.7/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> build/lib.linux-i686-2.7/Bio/SwissProt creating build/lib.linux-i686-2.7/Bio/TogoWS copying Bio/TogoWS/__init__.py -> build/lib.linux-i686-2.7/Bio/TogoWS creating build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/_utils.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/Newick.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/NewickIO.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/__init__.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/BaseTree.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/_io.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/_sugar.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> build/lib.linux-i686-2.7/Bio/Phylo copying Bio/Phylo/NexusIO.py -> build/lib.linux-i686-2.7/Bio/Phylo creating build/lib.linux-i686-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-i686-2.7/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-i686-2.7/Bio/Phylo/Applications creating build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-i686-2.7/Bio/Phylo/PAML creating build/lib.linux-i686-2.7/Bio/UniGene copying Bio/UniGene/__init__.py -> build/lib.linux-i686-2.7/Bio/UniGene copying Bio/UniGene/UniGene.py -> build/lib.linux-i686-2.7/Bio/UniGene creating build/lib.linux-i686-2.7/Bio/Wise copying Bio/Wise/psw.py -> build/lib.linux-i686-2.7/Bio/Wise copying Bio/Wise/__init__.py -> build/lib.linux-i686-2.7/Bio/Wise copying Bio/Wise/dnal.py -> build/lib.linux-i686-2.7/Bio/Wise creating build/lib.linux-i686-2.7/BioSQL copying BioSQL/__init__.py -> build/lib.linux-i686-2.7/BioSQL copying BioSQL/BioSeqDatabase.py -> build/lib.linux-i686-2.7/BioSQL copying BioSQL/BioSeq.py -> build/lib.linux-i686-2.7/BioSQL copying BioSQL/Loader.py -> build/lib.linux-i686-2.7/BioSQL copying BioSQL/DBUtils.py -> build/lib.linux-i686-2.7/BioSQL creating build/lib.linux-i686-2.7/Bio/Affy copying Bio/Affy/__init__.py -> build/lib.linux-i686-2.7/Bio/Affy copying Bio/Affy/CelFile.py -> build/lib.linux-i686-2.7/Bio/Affy creating build/lib.linux-i686-2.7/Bio/Cluster copying Bio/Cluster/__init__.py -> build/lib.linux-i686-2.7/Bio/Cluster creating build/lib.linux-i686-2.7/Bio/KDTree copying Bio/KDTree/KDTree.py -> build/lib.linux-i686-2.7/Bio/KDTree copying Bio/KDTree/__init__.py -> build/lib.linux-i686-2.7/Bio/KDTree creating build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_020511.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-i686-2.7/Bio/Entrez/DTDs creating build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/bottle.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_1d.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_1d.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_island.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/simple.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_split.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/decline_lambda.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/split_ssm_2d.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/island.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data copying Bio/PopGen/SimCoal/data/ssm_2d.par -> build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data running build_ext building 'Bio.cpairwise2' extension creating build/temp.linux-i686-2.7 creating build/temp.linux-i686-2.7/Bio gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -IBio -I/usr/include/python2.7 -c Bio/cpairwise2module.c -o build/temp.linux-i686-2.7/Bio/cpairwise2module.o gcc -pthread -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/Bio/cpairwise2module.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/Bio/cpairwise2.so building 'Bio.trie' extension gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -IBio -I/usr/include/python2.7 -c Bio/triemodule.c -o build/temp.linux-i686-2.7/Bio/triemodule.o gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -IBio -I/usr/include/python2.7 -c Bio/trie.c -o build/temp.linux-i686-2.7/Bio/trie.o gcc -pthread -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/Bio/triemodule.o build/temp.linux-i686-2.7/Bio/trie.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/Bio/trie.so building 'Bio.PDB.mmCIF.MMCIFlex' extension creating build/temp.linux-i686-2.7/Bio/PDB creating build/temp.linux-i686-2.7/Bio/PDB/mmCIF gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -IBio -I/usr/include/python2.7 -c Bio/PDB/mmCIF/lex.yy.c -o build/temp.linux-i686-2.7/Bio/PDB/mmCIF/lex.yy.o lex.yy.c:1040:13: warning: 'yyunput' defined but not used [-Wunused-function] lex.yy.c:1086:12: warning: 'input' defined but not used [-Wunused-function] mmcif.lex: In function 'yylex': mmcif.lex:43:1: warning: ignoring return value of 'fwrite', declared with attribute warn_unused_result [-Wunused-result] gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -IBio -I/usr/include/python2.7 -c Bio/PDB/mmCIF/MMCIFlexmodule.c -o build/temp.linux-i686-2.7/Bio/PDB/mmCIF/MMCIFlexmodule.o Bio/PDB/mmCIF/MMCIFlexmodule.c: In function 'MMCIFlex_open_file': Bio/PDB/mmCIF/MMCIFlexmodule.c:16:2: warning: implicit declaration of function 'mmcif_set_file' [-Wimplicit-function-declaration] Bio/PDB/mmCIF/MMCIFlexmodule.c: In function 'MMCIFlex_get_token': Bio/PDB/mmCIF/MMCIFlexmodule.c:44:2: warning: implicit declaration of function 'mmcif_get_token' [-Wimplicit-function-declaration] gcc -pthread -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/Bio/PDB/mmCIF/lex.yy.o build/temp.linux-i686-2.7/Bio/PDB/mmCIF/MMCIFlexmodule.o -L/usr/lib -lfl -lpython2.7 -o build/lib.linux-i686-2.7/Bio/PDB/mmCIF/MMCIFlex.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-i686-2.7/Bio/Nexus gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -I/usr/include/python2.7 -c Bio/Nexus/cnexus.c -o build/temp.linux-i686-2.7/Bio/Nexus/cnexus.o gcc -pthread -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/Bio/Nexus/cnexus.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/Bio/Nexus/cnexus.so building 'Bio.Cluster.cluster' extension creating build/temp.linux-i686-2.7/Bio/Cluster gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -I/usr/lib/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/Cluster/clustermodule.c -o build/temp.linux-i686-2.7/Bio/Cluster/clustermodule.o Bio/Cluster/clustermodule.c: In function 'initcluster': Bio/Cluster/clustermodule.c:2942:3: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] Bio/Cluster/clustermodule.c:2943:3: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -I/usr/lib/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/Cluster/cluster.c -o build/temp.linux-i686-2.7/Bio/Cluster/cluster.o gcc -pthread -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/Bio/Cluster/clustermodule.o build/temp.linux-i686-2.7/Bio/Cluster/cluster.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/Bio/Cluster/cluster.so building 'Bio.KDTree._CKDTree' extension creating build/temp.linux-i686-2.7/Bio/KDTree gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -I/usr/lib/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/KDTree/KDTree.c -o build/temp.linux-i686-2.7/Bio/KDTree/KDTree.o gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -I/usr/lib/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/KDTree/KDTreemodule.c -o build/temp.linux-i686-2.7/Bio/KDTree/KDTreemodule.o Bio/KDTree/KDTreemodule.c: In function 'init_CKDTree': Bio/KDTree/KDTreemodule.c:706:3: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] Bio/KDTree/KDTreemodule.c:707:3: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] gcc -pthread -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/Bio/KDTree/KDTree.o build/temp.linux-i686-2.7/Bio/KDTree/KDTreemodule.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/Bio/KDTree/_CKDTree.so building 'Bio.Motif._pwm' extension creating build/temp.linux-i686-2.7/Bio/Motif gcc -pthread -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -fPIC -I/usr/lib/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c Bio/Motif/_pwm.c -o build/temp.linux-i686-2.7/Bio/Motif/_pwm.o gcc -pthread -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/Bio/Motif/_pwm.o -L/usr/lib -lpython2.7 -o build/lib.linux-i686-2.7/Bio/Motif/_pwm.so + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.oLID5G + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 ++ dirname /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 + cd biopython-1.59 + LANG=C + export LANG + unset DISPLAY + rm -rf /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 + /usr/bin/python setup.py install -O1 --skip-build --root=/builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 --install-data=/usr/share/python-biopython running install running install_lib creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7 creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-i686-2.7/BioSQL/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-i686-2.7/BioSQL/BioSeqDatabase.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-i686-2.7/BioSQL/BioSeq.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-i686-2.7/BioSQL/Loader.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL copying build/lib.linux-i686-2.7/BioSQL/DBUtils.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-i686-2.7/Bio/SeqFeature.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/AlignIO/StockholmIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/AlignIO/Interfaces.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/AlignIO/ClustalIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/AlignIO/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/AlignIO/PhylipIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/AlignIO/EmbossIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/AlignIO/NexusIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/AlignIO/FastaIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO copying build/lib.linux-i686-2.7/Bio/LogisticRegression.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-i686-2.7/Bio/HMM/MarkovModel.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-i686-2.7/Bio/HMM/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-i686-2.7/Bio/HMM/Trainer.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-i686-2.7/Bio/HMM/Utilities.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM copying build/lib.linux-i686-2.7/Bio/HMM/DynamicProgramming.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/TogoWS copying build/lib.linux-i686-2.7/Bio/TogoWS/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/TogoWS copying build/lib.linux-i686-2.7/Bio/Index.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-i686-2.7/Bio/_py3k.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-i686-2.7/Bio/pairwise2.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Crystal copying build/lib.linux-i686-2.7/Bio/Crystal/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Crystal creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Statistics copying build/lib.linux-i686-2.7/Bio/Statistics/lowess.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Statistics copying build/lib.linux-i686-2.7/Bio/Statistics/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Statistics creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/FSSP copying build/lib.linux-i686-2.7/Bio/FSSP/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/FSSP copying build/lib.linux-i686-2.7/Bio/FSSP/fssp_rec.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/FSSP copying build/lib.linux-i686-2.7/Bio/FSSP/FSSPTools.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/FSSP copying build/lib.linux-i686-2.7/Bio/cpairwise2.so -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/_Prank.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/_Dialign.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/_Probcons.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/_ClustalOmega.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/_Mafft.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/_Clustalw.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/_Muscle.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/Applications/_TCoffee.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications copying build/lib.linux-i686-2.7/Bio/Align/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align copying build/lib.linux-i686-2.7/Bio/Align/Generic.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align copying build/lib.linux-i686-2.7/Bio/Align/AlignInfo.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-i686-2.7/Bio/SCOP/Cla.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-i686-2.7/Bio/SCOP/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-i686-2.7/Bio/SCOP/Hie.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-i686-2.7/Bio/SCOP/Des.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-i686-2.7/Bio/SCOP/Dom.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-i686-2.7/Bio/SCOP/Raf.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP copying build/lib.linux-i686-2.7/Bio/SCOP/Residues.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_Graph.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_Colors.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_Track.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_Diagram.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_Feature.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-i686-2.7/Bio/Graphics/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-i686-2.7/Bio/Graphics/DisplayRepresentation.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-i686-2.7/Bio/Graphics/BasicChromosome.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-i686-2.7/Bio/Graphics/Distribution.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics copying build/lib.linux-i686-2.7/Bio/Graphics/Comparative.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-i686-2.7/Bio/ExPASy/ScanProsite.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-i686-2.7/Bio/ExPASy/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-i686-2.7/Bio/ExPASy/Prodoc.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-i686-2.7/Bio/ExPASy/Prosite.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-i686-2.7/Bio/ExPASy/Enzyme.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy copying build/lib.linux-i686-2.7/Bio/SeqRecord.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NMR copying build/lib.linux-i686-2.7/Bio/NMR/xpktools.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NMR copying build/lib.linux-i686-2.7/Bio/NMR/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NMR copying build/lib.linux-i686-2.7/Bio/NMR/NOEtools.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NMR copying build/lib.linux-i686-2.7/Bio/MaxEntropy.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/SeqXmlIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/SffIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/Interfaces.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/QualityIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/UniprotIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/IgIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/AbiIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/TabIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/InsdcIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/PirIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/_index.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/AceIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/_convert.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/FastaIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/PhdIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/SeqIO/SwissIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO copying build/lib.linux-i686-2.7/Bio/ParserSupport.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-i686-2.7/Bio/MarkovModel.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif copying build/lib.linux-i686-2.7/Bio/Motif/_Motif.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif copying build/lib.linux-i686-2.7/Bio/Motif/Thresholds.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Applications copying build/lib.linux-i686-2.7/Bio/Motif/Applications/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Applications copying build/lib.linux-i686-2.7/Bio/Motif/Applications/_AlignAce.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Applications copying build/lib.linux-i686-2.7/Bio/Motif/_pwm.so -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif copying build/lib.linux-i686-2.7/Bio/Motif/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers copying build/lib.linux-i686-2.7/Bio/Motif/Parsers/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers copying build/lib.linux-i686-2.7/Bio/Motif/Parsers/AlignAce.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers copying build/lib.linux-i686-2.7/Bio/Motif/Parsers/MAST.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers copying build/lib.linux-i686-2.7/Bio/Motif/Parsers/MEME.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Medline copying build/lib.linux-i686-2.7/Bio/Medline/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Medline copying build/lib.linux-i686-2.7/Bio/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SwissProt copying build/lib.linux-i686-2.7/Bio/SwissProt/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SwissProt copying build/lib.linux-i686-2.7/Bio/SwissProt/KeyWList.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SwissProt copying build/lib.linux-i686-2.7/Bio/triefind.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez copying build/lib.linux-i686-2.7/Bio/Entrez/Parser.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez copying build/lib.linux-i686-2.7/Bio/Entrez/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/xmlspecchars.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isocyr2.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/mmlalias.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/pubmed_110101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isogrk2.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isobox.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/mathml2.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/pubmed_020114.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/default-classes.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isomfrk.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/common.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/pubmed_100301.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isoamsn.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isogrk1.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isolat1.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/section.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/para.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/archivearticle.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/pmc-1.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/archivecustom-modules.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/egquery.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/htmltable.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isopub.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/math.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/mathmlsetup.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/pubmed_080101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isonum.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isoamsr.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/eLink_090910.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/pubmed_090101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/eSpell.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/link.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/archivecustom-classes.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isoamsb.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isomscr.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/SP_General.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/modules.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isogrk3.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/articlemeta.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isodia.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/mmlextra.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/HomoloGene.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/display.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isoamsa.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/chars.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/list.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isotech.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/eSearch_020511.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/eLink_020511.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/mathml2-qname-1.mod -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isolat2.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/eInfo_020511.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isomopf.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isogrk4.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/taxon.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isoamso.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/elink_020122.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/eLink_101123.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isocyr1.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/journalmeta.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/eSummary_041029.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/pubmed_100101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/ePost_020511.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/phrase.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/pubmed_120101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/isoamsc.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/notat.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/archivecustom-models.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/default-mixes.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/format.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/references.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/backmatter.ent -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs copying build/lib.linux-i686-2.7/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/DTDs creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Wise copying build/lib.linux-i686-2.7/Bio/Wise/psw.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Wise copying build/lib.linux-i686-2.7/Bio/Wise/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Wise copying build/lib.linux-i686-2.7/Bio/Wise/dnal.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Wise creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KDTree copying build/lib.linux-i686-2.7/Bio/KDTree/KDTree.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KDTree copying build/lib.linux-i686-2.7/Bio/KDTree/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KDTree copying build/lib.linux-i686-2.7/Bio/KDTree/_CKDTree.so -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KDTree creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-i686-2.7/Bio/PopGen/FDist/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-i686-2.7/Bio/PopGen/FDist/Utils.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-i686-2.7/Bio/PopGen/FDist/Async.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist copying build/lib.linux-i686-2.7/Bio/PopGen/FDist/Controller.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-i686-2.7/Bio/PopGen/GenePop/FileParser.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-i686-2.7/Bio/PopGen/GenePop/LargeFileParser.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-i686-2.7/Bio/PopGen/GenePop/EasyController.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-i686-2.7/Bio/PopGen/GenePop/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-i686-2.7/Bio/PopGen/GenePop/Utils.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-i686-2.7/Bio/PopGen/GenePop/Controller.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop copying build/lib.linux-i686-2.7/Bio/PopGen/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/Cache.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/Template.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/Async.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/Controller.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/bottle.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/ssm_1d.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/split_ssm_1d.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/split_island.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/simple.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/decline_split.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/decline_lambda.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/split_ssm_2d.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/island.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data copying build/lib.linux-i686-2.7/Bio/PopGen/SimCoal/data/ssm_2d.par -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/data creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.linux-i686-2.7/Bio/PopGen/Async/Local.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.linux-i686-2.7/Bio/PopGen/Async/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/Async copying build/lib.linux-i686-2.7/Bio/File.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-i686-2.7/Bio/trie.so -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-i686-2.7/Bio/GA/Selection/RouletteWheel.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-i686-2.7/Bio/GA/Selection/Abstract.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-i686-2.7/Bio/GA/Selection/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-i686-2.7/Bio/GA/Selection/Tournament.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection copying build/lib.linux-i686-2.7/Bio/GA/Selection/Diversity.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.linux-i686-2.7/Bio/GA/Mutation/General.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.linux-i686-2.7/Bio/GA/Mutation/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.linux-i686-2.7/Bio/GA/Mutation/Simple.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Mutation copying build/lib.linux-i686-2.7/Bio/GA/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Repair copying build/lib.linux-i686-2.7/Bio/GA/Repair/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Repair copying build/lib.linux-i686-2.7/Bio/GA/Repair/Stabilizing.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Repair creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-i686-2.7/Bio/GA/Crossover/General.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-i686-2.7/Bio/GA/Crossover/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-i686-2.7/Bio/GA/Crossover/Uniform.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-i686-2.7/Bio/GA/Crossover/Point.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-i686-2.7/Bio/GA/Crossover/TwoPoint.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-i686-2.7/Bio/GA/Crossover/GeneralPoint.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover copying build/lib.linux-i686-2.7/Bio/GA/Evolver.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA copying build/lib.linux-i686-2.7/Bio/GA/Organism.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Application copying build/lib.linux-i686-2.7/Bio/Application/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Application creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Compound copying build/lib.linux-i686-2.7/Bio/KEGG/Compound/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Compound copying build/lib.linux-i686-2.7/Bio/KEGG/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Enzyme copying build/lib.linux-i686-2.7/Bio/KEGG/Enzyme/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Enzyme creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Map copying build/lib.linux-i686-2.7/Bio/KEGG/Map/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Map creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Geo copying build/lib.linux-i686-2.7/Bio/Geo/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Geo copying build/lib.linux-i686-2.7/Bio/Geo/Record.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Geo creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.linux-i686-2.7/Bio/Sequencing/Applications/_Novoalign.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.linux-i686-2.7/Bio/Sequencing/Applications/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications copying build/lib.linux-i686-2.7/Bio/Sequencing/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.linux-i686-2.7/Bio/Sequencing/Ace.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.linux-i686-2.7/Bio/Sequencing/Phd.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing copying build/lib.linux-i686-2.7/Bio/DocSQL.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/UniGene copying build/lib.linux-i686-2.7/Bio/UniGene/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/UniGene copying build/lib.linux-i686-2.7/Bio/UniGene/UniGene.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/UniGene creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway copying build/lib.linux-i686-2.7/Bio/Pathway/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.linux-i686-2.7/Bio/Pathway/Rep/Graph.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.linux-i686-2.7/Bio/Pathway/Rep/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.linux-i686-2.7/Bio/Pathway/Rep/HashSet.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.linux-i686-2.7/Bio/Pathway/Rep/MultiGraph.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep copying build/lib.linux-i686-2.7/Bio/HotRand.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-i686-2.7/Bio/Nexus/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-i686-2.7/Bio/Nexus/Nexus.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-i686-2.7/Bio/Nexus/Nodes.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-i686-2.7/Bio/Nexus/Trees.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus copying build/lib.linux-i686-2.7/Bio/Nexus/cnexus.so -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Data copying build/lib.linux-i686-2.7/Bio/Data/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Data copying build/lib.linux-i686-2.7/Bio/Data/IUPACData.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Data copying build/lib.linux-i686-2.7/Bio/Data/CodonTable.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Data copying build/lib.linux-i686-2.7/Bio/Seq.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/FragmentMapper.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Model.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/StructureBuilder.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/MMCIF2Dict.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Selection.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/mmCIF copying build/lib.linux-i686-2.7/Bio/PDB/mmCIF/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/mmCIF copying build/lib.linux-i686-2.7/Bio/PDB/mmCIF/MMCIFlex.so -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/mmCIF copying build/lib.linux-i686-2.7/Bio/PDB/NACCESS.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Polypeptide.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Dice.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/PDBExceptions.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/PDBList.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Residue.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/NeighborSearch.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/HSExposure.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Atom.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Structure.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/AbstractPropertyMap.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/PSEA.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/parse_pdb_header.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Chain.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/PDBParser.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/DSSP.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/PDBIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/MMCIFParser.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/ResidueDepth.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Superimposer.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Entity.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/StructureAlignment.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB copying build/lib.linux-i686-2.7/Bio/PDB/Vector.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/BackPropagation/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/BackPropagation/Network.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/BackPropagation/Layer.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/Training.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/StopTraining.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene/Pattern.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene/Schema.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene/Motif.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-i686-2.7/Bio/NeuralNetwork/Gene/Signature.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene copying build/lib.linux-i686-2.7/Bio/kNN.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.linux-i686-2.7/Bio/SubsMat/FreqTable.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.linux-i686-2.7/Bio/SubsMat/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SubsMat copying build/lib.linux-i686-2.7/Bio/SubsMat/MatrixInfo.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SubsMat creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-i686-2.7/Bio/Phylo/_utils.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/_parse_baseml.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/_parse_yn00.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/codeml.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/yn00.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/baseml.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/_parse_codeml.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/chi2.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/PAML/_paml.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML copying build/lib.linux-i686-2.7/Bio/Phylo/Newick.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-i686-2.7/Bio/Phylo/NewickIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.linux-i686-2.7/Bio/Phylo/Applications/_Phyml.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.linux-i686-2.7/Bio/Phylo/Applications/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/Applications copying build/lib.linux-i686-2.7/Bio/Phylo/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-i686-2.7/Bio/Phylo/BaseTree.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-i686-2.7/Bio/Phylo/_io.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-i686-2.7/Bio/Phylo/PhyloXMLIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-i686-2.7/Bio/Phylo/_sugar.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-i686-2.7/Bio/Phylo/PhyloXML.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo copying build/lib.linux-i686-2.7/Bio/Phylo/NexusIO.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Cluster copying build/lib.linux-i686-2.7/Bio/Cluster/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Cluster copying build/lib.linux-i686-2.7/Bio/Cluster/cluster.so -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Cluster creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/CAPS copying build/lib.linux-i686-2.7/Bio/CAPS/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/CAPS copying build/lib.linux-i686-2.7/Bio/Search.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio copying build/lib.linux-i686-2.7/Bio/NaiveBayes.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/CheckSum.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/MeltingTemp.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/IsoelectricPoint.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/ProtParam.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/CodonUsageIndices.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/ProtParamData.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/CodonUsage.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils copying build/lib.linux-i686-2.7/Bio/SeqUtils/lcc.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss copying build/lib.linux-i686-2.7/Bio/Emboss/PrimerSearch.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss copying build/lib.linux-i686-2.7/Bio/Emboss/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss copying build/lib.linux-i686-2.7/Bio/Emboss/Applications.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss copying build/lib.linux-i686-2.7/Bio/Emboss/Primer3.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.linux-i686-2.7/Bio/Alphabet/IUPAC.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.linux-i686-2.7/Bio/Alphabet/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Alphabet copying build/lib.linux-i686-2.7/Bio/Alphabet/Reduced.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Alphabet creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-i686-2.7/Bio/Blast/NCBIWWW.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-i686-2.7/Bio/Blast/ParseBlastTable.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-i686-2.7/Bio/Blast/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-i686-2.7/Bio/Blast/Applications.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-i686-2.7/Bio/Blast/Record.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-i686-2.7/Bio/Blast/NCBIStandalone.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast copying build/lib.linux-i686-2.7/Bio/Blast/NCBIXML.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SVDSuperimposer copying build/lib.linux-i686-2.7/Bio/SVDSuperimposer/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SVDSuperimposer copying build/lib.linux-i686-2.7/Bio/SVDSuperimposer/SVDSuperimposer.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SVDSuperimposer creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-i686-2.7/Bio/Restriction/PrintFormat.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-i686-2.7/Bio/Restriction/Restriction_Dictionary.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-i686-2.7/Bio/Restriction/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-i686-2.7/Bio/Restriction/Restriction.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction copying build/lib.linux-i686-2.7/Bio/Restriction/RanaConfig.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/_Update copying build/lib.linux-i686-2.7/Bio/Restriction/_Update/RestrictionCompiler.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/_Update copying build/lib.linux-i686-2.7/Bio/Restriction/_Update/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/_Update copying build/lib.linux-i686-2.7/Bio/Restriction/_Update/Update.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/_Update creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank copying build/lib.linux-i686-2.7/Bio/GenBank/Scanner.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank copying build/lib.linux-i686-2.7/Bio/GenBank/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank copying build/lib.linux-i686-2.7/Bio/GenBank/Record.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank copying build/lib.linux-i686-2.7/Bio/GenBank/utils.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Affy copying build/lib.linux-i686-2.7/Bio/Affy/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Affy copying build/lib.linux-i686-2.7/Bio/Affy/CelFile.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Affy creating /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Compass copying build/lib.linux-i686-2.7/Bio/Compass/__init__.py -> /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Compass byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL/BioSeq.py to BioSeq.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL/Loader.py to Loader.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/BioSQL/DBUtils.py to DBUtils.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqFeature.py to SeqFeature.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO/Interfaces.py to Interfaces.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO/NexusIO.py to NexusIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/AlignIO/FastaIO.py to FastaIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/LogisticRegression.py to LogisticRegression.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM/MarkovModel.py to MarkovModel.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM/Trainer.py to Trainer.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM/Utilities.py to Utilities.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/TogoWS/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Index.py to Index.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/_py3k.py to _py3k.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/pairwise2.py to pairwise2.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Crystal/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Statistics/lowess.py to lowess.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Statistics/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/FSSP/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/FSSP/fssp_rec.py to fssp_rec.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/FSSP/FSSPTools.py to FSSPTools.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/_Prank.py to _Prank.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/_Dialign.py to _Dialign.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/_Probcons.py to _Probcons.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/_Mafft.py to _Mafft.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/_Muscle.py to _Muscle.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/Generic.py to Generic.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Align/AlignInfo.py to AlignInfo.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP/Cla.py to Cla.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP/Hie.py to Hie.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP/Des.py to Des.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP/Dom.py to Dom.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP/Raf.py to Raf.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SCOP/Residues.py to Residues.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/Distribution.py to Distribution.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Graphics/Comparative.py to Comparative.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy/Prodoc.py to Prodoc.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy/Prosite.py to Prosite.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ExPASy/Enzyme.py to Enzyme.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqRecord.py to SeqRecord.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NMR/xpktools.py to xpktools.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NMR/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NMR/NOEtools.py to NOEtools.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/MaxEntropy.py to MaxEntropy.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/SffIO.py to SffIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/Interfaces.py to Interfaces.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/QualityIO.py to QualityIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/IgIO.py to IgIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/AbiIO.py to AbiIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/TabIO.py to TabIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/PirIO.py to PirIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/_index.py to _index.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/AceIO.py to AceIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/_convert.py to _convert.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/FastaIO.py to FastaIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/PhdIO.py to PhdIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqIO/SwissIO.py to SwissIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/ParserSupport.py to ParserSupport.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/MarkovModel.py to MarkovModel.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/_Motif.py to _Motif.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Thresholds.py to Thresholds.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Applications/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Applications/_AlignAce.py to _AlignAce.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers/AlignAce.py to AlignAce.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers/MAST.py to MAST.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/Parsers/MEME.py to MEME.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Medline/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SwissProt/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SwissProt/KeyWList.py to KeyWList.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/triefind.py to triefind.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/Parser.py to Parser.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Entrez/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Wise/psw.py to psw.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Wise/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Wise/dnal.py to dnal.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KDTree/KDTree.py to KDTree.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KDTree/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist/Utils.py to Utils.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist/Async.py to Async.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/FDist/Controller.py to Controller.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop/Utils.py to Utils.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/GenePop/Controller.py to Controller.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/Cache.py to Cache.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/Template.py to Template.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/Async.py to Async.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/SimCoal/Controller.py to Controller.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/Async/Local.py to Local.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PopGen/Async/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/File.py to File.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection/RouletteWheel.py to RouletteWheel.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection/Abstract.py to Abstract.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection/Tournament.py to Tournament.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Selection/Diversity.py to Diversity.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Mutation/General.py to General.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Mutation/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Mutation/Simple.py to Simple.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Repair/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Repair/Stabilizing.py to Stabilizing.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover/General.py to General.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover/Uniform.py to Uniform.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover/Point.py to Point.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover/TwoPoint.py to TwoPoint.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Crossover/GeneralPoint.py to GeneralPoint.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Evolver.py to Evolver.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GA/Organism.py to Organism.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Application/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Compound/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Enzyme/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KEGG/Map/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Geo/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Geo/Record.py to Record.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing/Applications/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing/Ace.py to Ace.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Sequencing/Phd.py to Phd.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/DocSQL.py to DocSQL.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/UniGene/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/UniGene/UniGene.py to UniGene.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep/Graph.py to Graph.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep/HashSet.py to HashSet.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/HotRand.py to HotRand.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus/Nexus.py to Nexus.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus/Nodes.py to Nodes.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus/Trees.py to Trees.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Data/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Data/IUPACData.py to IUPACData.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Data/CodonTable.py to CodonTable.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Seq.py to Seq.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Model.py to Model.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Selection.py to Selection.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/mmCIF/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/NACCESS.py to NACCESS.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Polypeptide.py to Polypeptide.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Dice.py to Dice.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/PDBList.py to PDBList.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Residue.py to Residue.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/HSExposure.py to HSExposure.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Atom.py to Atom.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Structure.py to Structure.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/PSEA.py to PSEA.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Chain.py to Chain.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/PDBParser.py to PDBParser.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/DSSP.py to DSSP.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/PDBIO.py to PDBIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Superimposer.py to Superimposer.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Entity.py to Entity.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/Vector.py to Vector.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation/Network.py to Network.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/BackPropagation/Layer.py to Layer.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Training.py to Training.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/StopTraining.py to StopTraining.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/Pattern.py to Pattern.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/Schema.py to Schema.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/Motif.py to Motif.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NeuralNetwork/Gene/Signature.py to Signature.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/kNN.py to kNN.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SubsMat/FreqTable.py to FreqTable.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SubsMat/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/_utils.py to _utils.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/codeml.py to codeml.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/yn00.py to yn00.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/baseml.py to baseml.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/chi2.py to chi2.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PAML/_paml.py to _paml.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/Newick.py to Newick.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/NewickIO.py to NewickIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/Applications/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/BaseTree.py to BaseTree.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/_io.py to _io.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/_sugar.py to _sugar.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/PhyloXML.py to PhyloXML.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Phylo/NexusIO.py to NexusIO.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Cluster/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/CAPS/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Search.py to Search.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/NaiveBayes.py to NaiveBayes.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/CheckSum.py to CheckSum.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/ProtParam.py to ProtParam.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SeqUtils/lcc.py to lcc.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss/Applications.py to Applications.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Emboss/Primer3.py to Primer3.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Alphabet/IUPAC.py to IUPAC.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Alphabet/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Alphabet/Reduced.py to Reduced.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast/Applications.py to Applications.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast/Record.py to Record.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast/NCBIStandalone.py to NCBIStandalone.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Blast/NCBIXML.py to NCBIXML.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SVDSuperimposer/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/SVDSuperimposer/SVDSuperimposer.py to SVDSuperimposer.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/PrintFormat.py to PrintFormat.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/Restriction.py to Restriction.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/RanaConfig.py to RanaConfig.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/_Update/RestrictionCompiler.py to RestrictionCompiler.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/_Update/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Restriction/_Update/Update.py to Update.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank/Scanner.py to Scanner.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank/Record.py to Record.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/GenBank/utils.py to utils.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Affy/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Affy/CelFile.py to CelFile.pyc byte-compiling /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Compass/__init__.py to __init__.pyc writing byte-compilation script '/tmp/tmpjEiswl.py' /usr/bin/python -O /tmp/tmpjEiswl.py removing /tmp/tmpjEiswl.py running install_egg_info running egg_info creating biopython.egg-info writing biopython.egg-info/PKG-INFO writing top-level names to biopython.egg-info/top_level.txt writing dependency_links to biopython.egg-info/dependency_links.txt writing manifest file 'biopython.egg-info/SOURCES.txt' reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'Tests/Graphics/*' warning: no previously-included files matching '.cvsignore' found under directory '*' warning: no previously-included files matching '*.pyc' found under directory '*' writing manifest file 'biopython.egg-info/SOURCES.txt' Copying biopython.egg-info to /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/biopython-1.59-py2.7.egg-info running install_scripts + /usr/lib/rpm/find-debuginfo.sh --strict-build-id /builddir/build/BUILD/biopython-1.59 extracting debug info from /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/cpairwise2.so extracting debug info from /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Motif/_pwm.so extracting debug info from /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/KDTree/_CKDTree.so extracting debug info from /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/trie.so extracting debug info from /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Nexus/cnexus.so extracting debug info from /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/PDB/mmCIF/MMCIFlex.so extracting debug info from /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/site-packages/Bio/Cluster/cluster.so cpio: biopython-1.59/lex.yy.c: Cannot stat: No such file or directory cpio: biopython-1.59/mmcif.lex: Cannot stat: No such file or directory 786 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 Bytecompiling .py files below /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/lib/python2.7/ using /usr/bin/python2.7 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/lib/rpm/redhat/brp-java-repack-jars Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.CqrDqr + umask 022 + cd /builddir/build/BUILD + cd biopython-1.59 + unset DISPLAY + exit 0 Processing files: python-biopython-1.59-1.fc15.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.mIDATb + umask 022 + cd /builddir/build/BUILD + cd biopython-1.59 + DOCDIR=/builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/share/doc/python-biopython-1.59 + export DOCDIR + /bin/mkdir -p /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/share/doc/python-biopython-1.59 + cp -pr Doc Scripts /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/share/doc/python-biopython-1.59 + cp -pr CONTRIB DEPRECATED LICENSE NEWS README /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386/usr/share/doc/python-biopython-1.59 + exit 0 Provides: MMCIFlex.so _CKDTree.so _pwm.so cluster.so cnexus.so cpairwise2.so trie.so Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libpthread.so.0 libpython2.7.so.1.0 python(abi) = 2.7 rtld(GNU_HASH) Processing files: python-biopython-debuginfo-1.59-1.fc15.i686 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 warning: Could not canonicalize hostname: x86-02.phx2.fedoraproject.org Wrote: /builddir/build/RPMS/python-biopython-1.59-1.fc15.i686.rpm Wrote: /builddir/build/RPMS/python-biopython-debuginfo-1.59-1.fc15.i686.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.4fv7qD + umask 022 + cd /builddir/build/BUILD + cd biopython-1.59 + rm -rf /builddir/build/BUILDROOT/python-biopython-1.59-1.fc15.i386 + exit 0 Child returncode was: 0 LEAVE do -->