Mock Version: 1.1.21 Mock Version: 1.1.21 ENTER do(['bash', '--login', '-c', 'rpmbuild -bs --target i686 --nodeps builddir/build/SPECS/mpi4py.spec'], False, '/var/lib/mock/f18-build-1428623-231861/root/', None, 86400, True, False, 500, 425, None, False, {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n ""', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'}, logger=) Executing command: ['bash', '--login', '-c', 'rpmbuild -bs --target i686 --nodeps builddir/build/SPECS/mpi4py.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n ""', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'} sh: line 0: fg: no job control Building target platforms: i686 Building for target i686 Wrote: /builddir/build/SRPMS/mpi4py-1.3-5.fc18.src.rpm Child return code was: 0 LEAVE do --> ENTER do(['bash', '--login', '-c', 'rpmbuild -bb --target i686 --nodeps builddir/build/SPECS/mpi4py.spec'], False, '/var/lib/mock/f18-build-1428623-231861/root/', None, 86400, True, False, 500, 425, None, False, {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n ""', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'}, logger=) Executing command: ['bash', '--login', '-c', 'rpmbuild -bb --target i686 --nodeps builddir/build/SPECS/mpi4py.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n ""', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'} Building target platforms: i686 Building for target i686 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.w5gMOu + umask 022 + cd /builddir/build/BUILD + LANG=C + export LANG + unset DISPLAY + cd /builddir/build/BUILD + rm -rf mpi4py-1.3 + /usr/bin/gzip -dc /builddir/build/SOURCES/mpi4py-1.3.tar.gz + /usr/bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + cd mpi4py-1.3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -r docs/source ++ find ++ grep runtests.bat + for file in '$(find | grep runtests.bat)' + sed -i 's/\r//' ./demo/reductions/runtests.bat + for file in '$(find | grep runtests.bat)' + sed -i 's/\r//' ./demo/mpi-ref-v1/runtests.bat + for file in '$(find | grep runtests.bat)' + sed -i 's/\r//' ./demo/init-fini/runtests.bat + for file in '$(find | grep runtests.bat)' + sed -i 's/\r//' ./demo/nxtval/runtests.bat + for file in '$(find | grep runtests.bat)' + sed -i 's/\r//' ./demo/sequential/runtests.bat + rm -rf /builddir/build/BUILD/python3-mpi4py-1.3-5.fc18 + cp -a . /builddir/build/BUILD/python3-mpi4py-1.3-5.fc18 + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.H894jV + umask 022 + cd /builddir/build/BUILD + cd mpi4py-1.3 + LANG=C + export LANG + unset DISPLAY + export CC=mpicc + CC=mpicc + export CXX=mpicxx + CXX=mpicxx + . /etc/profile.d/modules.sh ++++ /bin/ps -p 16343 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load openmpi-i386 ++ /usr/bin/modulecmd sh load openmpi-i386 + eval LD_LIBRARY_PATH=/usr/lib/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=openmpi-i386' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-i386:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-i386' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-i386' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-i386' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-i386' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-i386' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/openmpi-i386' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=openmpi-i386 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-i386:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-i386 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-i386 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-i386 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-i386 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-i386 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/openmpi-i386 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + /usr/bin/python setup.py build running build running build_src running build_py creating build creating build/lib.linux-i686-2.7 creating build/lib.linux-i686-2.7/mpi4py copying src/rc.py -> build/lib.linux-i686-2.7/mpi4py copying src/__init__.py -> build/lib.linux-i686-2.7/mpi4py creating build/lib.linux-i686-2.7/mpi4py/include creating build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.h -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi_c.pxd -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/MPI.pxd -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pxd -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pyx -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi.pxi -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.i -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py running build_clib MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/openmpi/bin/mpicc MPI C++ compiler: /usr/lib/openmpi/bin/mpicxx MPI F77 compiler: /usr/lib/openmpi/bin/mpif77 MPI F90 compiler: /usr/lib/openmpi/bin/mpif90 checking for library 'mpe' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lmpe -o _configtest /usr/bin/ld: cannot find -lmpe collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'mpe' dylib library creating build/temp.linux-i686-2.7 creating build/temp.linux-i686-2.7/src /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-mpe.c -o build/temp.linux-i686-2.7/src/pmpi-mpe.o creating build/lib.linux-i686-2.7/mpi4py/lib-pmpi /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/pmpi-mpe.o -o build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libmpe.so checking for library 'vt-mpi' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-mpi -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'vt' dylib library /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt.c -o build/temp.linux-i686-2.7/src/pmpi-vt.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/pmpi-vt.o -o build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt.so -Wl,-whole-archive -lvt-mpi -Wl,-no-whole-archive -lotf -lz -ldl /usr/bin/ld: cannot find -lz collect2: error: ld returned 1 exit status checking for library 'vt-mpi' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o warning: build_clib: building library "vt" failed warning: build_clib: command '/usr/lib/openmpi/bin/mpicc' failed with exit status 1 /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-mpi -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'vt-mpi' dylib library /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt-mpi.c -o build/temp.linux-i686-2.7/src/pmpi-vt-mpi.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/pmpi-vt-mpi.o -lvt-mpi -o build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt-mpi.so checking for library 'vt-hyb' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-hyb -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'vt-hyb' dylib library /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt-hyb.c -o build/temp.linux-i686-2.7/src/pmpi-vt-hyb.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/pmpi-vt-hyb.o -lvt-hyb -o build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt-hyb.so running build_ext MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/openmpi/bin/mpicc MPI C++ compiler: /usr/lib/openmpi/bin/mpicxx MPI F77 compiler: /usr/lib/openmpi/bin/mpif77 MPI F90 compiler: /usr/lib/openmpi/bin/mpif90 checking for MPI compile and link ... checking for header 'mpi.h' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for missing MPI functions/symbols ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o checking for function 'MPI_Type_create_f90_integer' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_real' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_complex' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.MPI' extension /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c src/MPI.c -o build/temp.linux-i686-2.7/src/MPI.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/MPI.o -Lbuild/temp.linux-i686-2.7 -lpython2.7 -o build/lib.linux-i686-2.7/mpi4py/MPI.so writing build/lib.linux-i686-2.7/mpi4py/mpi.cfg checking for MPE availability ... checking for library 'lmpe' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -llmpe -o _configtest /usr/bin/ld: cannot find -llmpe collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'mpe' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -lmpe -o _configtest /usr/bin/ld: cannot find -lmpe collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'pthread' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -lpthread -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for header 'mpe.h' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o _configtest.c:3:17: fatal error: mpe.h: No such file or directory compilation terminated. failure. removing: _configtest.c _configtest.o failure. building 'mpi4py.MPE' extension /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c src/MPE.c -o build/temp.linux-i686-2.7/src/MPE.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/MPE.o -Lbuild/temp.linux-i686-2.7 -lpython2.7 -o build/lib.linux-i686-2.7/mpi4py/MPE.so checking for dlopen() availability ... checking for header 'dlfcn.h' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! checking for library 'dl' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'dlopen' ... /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.dl' extension /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -DHAVE_DLFCN_H=1 -DHAVE_DLOPEN=1 -I/usr/include/python2.7 -c src/dynload.c -o build/temp.linux-i686-2.7/src/dynload.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/dynload.o -Lbuild/temp.linux-i686-2.7 -ldl -lpython2.7 -o build/lib.linux-i686-2.7/mpi4py/dl.so running build_exe MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/openmpi/bin/mpicc MPI C++ compiler: /usr/lib/openmpi/bin/mpicxx MPI F77 compiler: /usr/lib/openmpi/bin/mpif77 MPI F90 compiler: /usr/lib/openmpi/bin/mpif90 building 'python-mpi' executable /usr/lib/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c src/python.c -o build/temp.linux-i686-2.7/src/python.o creating build/lib.linux-i686-2.7/mpi4py/bin /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -Wl,-export-dynamic build/temp.linux-i686-2.7/src/python.o -L/usr/lib -L/usr/lib/python2.7/config -Lbuild/temp.linux-i686-2.7 -lpython2.7 -o build/lib.linux-i686-2.7/mpi4py/bin/python-mpi -Wl,-z,relro -lpthread -ldl -lutil -lm + mv build openmpi + . /etc/profile.d/modules.sh ++++ /bin/ps -p 16343 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' openmpi-i386 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload openmpi-i386 ++ /usr/bin/modulecmd sh unload openmpi-i386 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 16343 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpich2-i386 ++ /usr/bin/modulecmd sh load mpich2-i386 + eval LD_LIBRARY_PATH=/usr/lib/mpich2/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpich2-i386' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/mpich2/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich2-i386' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-i386' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/mpich2' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich2-i386' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/mpich2/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich2' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich2' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich2' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich2-i386' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/mpich2' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpich2-i386' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib/mpich2/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpich2-i386 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib/mpich2/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich2-i386 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-i386 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib/mpich2 ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich2-i386 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib/mpich2/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich2 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich2 ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich2 ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich2-i386 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib/python2.7/site-packages/mpich2 ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpich2-i386 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + /usr/bin/python setup.py build running build running build_src running build_py creating build creating build/lib.linux-i686-2.7 creating build/lib.linux-i686-2.7/mpi4py copying src/rc.py -> build/lib.linux-i686-2.7/mpi4py copying src/__init__.py -> build/lib.linux-i686-2.7/mpi4py creating build/lib.linux-i686-2.7/mpi4py/include creating build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.h -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi_c.pxd -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/MPI.pxd -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pxd -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pyx -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi.pxi -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.i -> build/lib.linux-i686-2.7/mpi4py/include/mpi4py running build_clib MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/mpich2/bin/mpicc MPI C++ compiler: /usr/lib/mpich2/bin/mpicxx MPI F77 compiler: /usr/lib/mpich2/bin/mpif77 MPI F90 compiler: /usr/lib/mpich2/bin/mpif90 checking for library 'mpe' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lmpe -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for library 'lmpe' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -llmpe -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for library 'pthread' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lpthread -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpe' dylib library creating build/temp.linux-i686-2.7 creating build/temp.linux-i686-2.7/src /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-mpe.c -o build/temp.linux-i686-2.7/src/pmpi-mpe.o creating build/lib.linux-i686-2.7/mpi4py/lib-pmpi /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/pmpi-mpe.o -o build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libmpe.so -Wl,-whole-archive -llmpe -Wl,-no-whole-archive -lmpe -lpthread checking for library 'vt-mpi' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-mpi -o _configtest /usr/bin/ld: cannot find -lvt-mpi collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'vt.mpi' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt.mpi -o _configtest /usr/bin/ld: cannot find -lvt.mpi collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt' dylib library /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt.c -o build/temp.linux-i686-2.7/src/pmpi-vt.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/pmpi-vt.o -o build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt.so checking for library 'vt-mpi' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-mpi -o _configtest /usr/bin/ld: cannot find -lvt-mpi collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt-mpi' dylib library /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt-mpi.c -o build/temp.linux-i686-2.7/src/pmpi-vt-mpi.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/pmpi-vt-mpi.o -o build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt-mpi.so checking for library 'vt-hyb' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-hyb -o _configtest /usr/bin/ld: cannot find -lvt-hyb collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt-hyb' dylib library /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt-hyb.c -o build/temp.linux-i686-2.7/src/pmpi-vt-hyb.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/pmpi-vt-hyb.o -o build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt-hyb.so running build_ext MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/mpich2/bin/mpicc MPI C++ compiler: /usr/lib/mpich2/bin/mpicxx MPI F77 compiler: /usr/lib/mpich2/bin/mpif77 MPI F90 compiler: /usr/lib/mpich2/bin/mpif90 checking for MPI compile and link ... checking for header 'mpi.h' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for missing MPI functions/symbols ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o checking for function 'MPI_Type_create_f90_integer' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_real' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_complex' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.MPI' extension /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c src/MPI.c -o build/temp.linux-i686-2.7/src/MPI.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/MPI.o -Lbuild/temp.linux-i686-2.7 -lpython2.7 -o build/lib.linux-i686-2.7/mpi4py/MPI.so writing build/lib.linux-i686-2.7/mpi4py/mpi.cfg checking for MPE availability ... checking for library 'lmpe' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -llmpe -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for library 'mpe' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -lmpe -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for library 'pthread' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -lpthread -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for header 'mpe.h' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! checking for function 'MPE_Init_log' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -llmpe -lmpe -lpthread -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.MPE' extension /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -DHAVE_MPE=1 -I/usr/include/python2.7 -c src/MPE.c -o build/temp.linux-i686-2.7/src/MPE.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/MPE.o -Lbuild/temp.linux-i686-2.7 -lpython2.7 -o build/lib.linux-i686-2.7/mpi4py/MPE.so -Wl,-whole-archive -llmpe -Wl,-no-whole-archive -lmpe -lpthread checking for dlopen() availability ... checking for header 'dlfcn.h' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! checking for library 'dl' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'dlopen' ... /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-2.7 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.dl' extension /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -DHAVE_DLFCN_H=1 -DHAVE_DLOPEN=1 -I/usr/include/python2.7 -c src/dynload.c -o build/temp.linux-i686-2.7/src/dynload.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-2.7/src/dynload.o -Lbuild/temp.linux-i686-2.7 -ldl -lpython2.7 -o build/lib.linux-i686-2.7/mpi4py/dl.so running build_exe MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/mpich2/bin/mpicc MPI C++ compiler: /usr/lib/mpich2/bin/mpicxx MPI F77 compiler: /usr/lib/mpich2/bin/mpif77 MPI F90 compiler: /usr/lib/mpich2/bin/mpif90 building 'python-mpi' executable /usr/lib/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python2.7 -c src/python.c -o build/temp.linux-i686-2.7/src/python.o creating build/lib.linux-i686-2.7/mpi4py/bin /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -Wl,-export-dynamic build/temp.linux-i686-2.7/src/python.o -L/usr/lib -L/usr/lib/python2.7/config -Lbuild/temp.linux-i686-2.7 -lpython2.7 -o build/lib.linux-i686-2.7/mpi4py/bin/python-mpi -Wl,-z,relro -lpthread -ldl -lutil -lm + mv build mpich2 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 16343 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpich2-i386 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpich2-i386 ++ /usr/bin/modulecmd sh unload mpich2-i386 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + pushd /builddir/build/BUILD/python3-mpi4py-1.3-5.fc18 ~/build/BUILD/python3-mpi4py-1.3-5.fc18 ~/build/BUILD/mpi4py-1.3 + export CC=mpicc + CC=mpicc + export CXX=mpicxx + CXX=mpicxx + . /etc/profile.d/modules.sh ++++ /bin/ps -p 16343 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load openmpi-i386 ++ /usr/bin/modulecmd sh load openmpi-i386 + eval LD_LIBRARY_PATH=/usr/lib/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=openmpi-i386' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-i386:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-i386' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-i386' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-i386' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-i386' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-i386' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/openmpi-i386' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=openmpi-i386 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-i386:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-i386 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-i386 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-i386 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-i386 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-i386 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/openmpi-i386 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + /usr/bin/python3 setup.py build running build running build_src running build_py creating build creating build/lib.linux-i686-3.3 creating build/lib.linux-i686-3.3/mpi4py copying src/rc.py -> build/lib.linux-i686-3.3/mpi4py copying src/__init__.py -> build/lib.linux-i686-3.3/mpi4py creating build/lib.linux-i686-3.3/mpi4py/include creating build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.h -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi_c.pxd -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/MPI.pxd -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pxd -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pyx -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi.pxi -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.i -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py running build_clib MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/openmpi/bin/mpicc MPI C++ compiler: /usr/lib/openmpi/bin/mpicxx MPI F77 compiler: /usr/lib/openmpi/bin/mpif77 MPI F90 compiler: /usr/lib/openmpi/bin/mpif90 checking for library 'mpe' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lmpe -o _configtest /usr/bin/ld: cannot find -lmpe collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'mpe' dylib library creating build/temp.linux-i686-3.3 creating build/temp.linux-i686-3.3/src /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-mpe.c -o build/temp.linux-i686-3.3/src/pmpi-mpe.o creating build/lib.linux-i686-3.3/mpi4py/lib-pmpi /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/pmpi-mpe.o -o build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libmpe.so checking for library 'vt-mpi' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-mpi -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'vt' dylib library /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt.c -o build/temp.linux-i686-3.3/src/pmpi-vt.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/pmpi-vt.o -o build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt.so -Wl,-whole-archive -lvt-mpi -Wl,-no-whole-archive -lotf -lz -ldl /usr/bin/ld: cannot find -lz collect2: error: ld returned 1 exit status checking for library 'vt-mpi' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o warning: build_clib: building library "vt" failed warning: build_clib: command '/usr/lib/openmpi/bin/mpicc' failed with exit status 1 /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-mpi -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'vt-mpi' dylib library /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt-mpi.c -o build/temp.linux-i686-3.3/src/pmpi-vt-mpi.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/pmpi-vt-mpi.o -lvt-mpi -o build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt-mpi.so checking for library 'vt-hyb' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-hyb -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'vt-hyb' dylib library /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt-hyb.c -o build/temp.linux-i686-3.3/src/pmpi-vt-hyb.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/pmpi-vt-hyb.o -lvt-hyb -o build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt-hyb.so running build_ext MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/openmpi/bin/mpicc MPI C++ compiler: /usr/lib/openmpi/bin/mpicxx MPI F77 compiler: /usr/lib/openmpi/bin/mpif77 MPI F90 compiler: /usr/lib/openmpi/bin/mpif90 checking for MPI compile and link ... checking for header 'mpi.h' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for missing MPI functions/symbols ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o checking for function 'MPI_Type_create_f90_integer' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_real' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_complex' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.MPI' extension /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c src/MPI.c -o build/temp.linux-i686-3.3/src/MPI.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/MPI.o -Lbuild/temp.linux-i686-3.3 -lpython3.3m -o build/lib.linux-i686-3.3/mpi4py/MPI.cpython-33m.so writing build/lib.linux-i686-3.3/mpi4py/mpi.cfg checking for MPE availability ... checking for library 'lmpe' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -llmpe -o _configtest /usr/bin/ld: cannot find -llmpe collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'mpe' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -lmpe -o _configtest /usr/bin/ld: cannot find -lmpe collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'pthread' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -lpthread -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for header 'mpe.h' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o _configtest.c:3:17: fatal error: mpe.h: No such file or directory compilation terminated. failure. removing: _configtest.c _configtest.o failure. building 'mpi4py.MPE' extension /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c src/MPE.c -o build/temp.linux-i686-3.3/src/MPE.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/MPE.o -Lbuild/temp.linux-i686-3.3 -lpython3.3m -o build/lib.linux-i686-3.3/mpi4py/MPE.cpython-33m.so checking for dlopen() availability ... checking for header 'dlfcn.h' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! checking for library 'dl' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'dlopen' ... /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.dl' extension /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -DHAVE_DLFCN_H=1 -DHAVE_DLOPEN=1 -I/usr/include/python3.3m -c src/dynload.c -o build/temp.linux-i686-3.3/src/dynload.o /usr/lib/openmpi/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/dynload.o -Lbuild/temp.linux-i686-3.3 -ldl -lpython3.3m -o build/lib.linux-i686-3.3/mpi4py/dl.cpython-33m.so running build_exe MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/openmpi/bin/mpicc MPI C++ compiler: /usr/lib/openmpi/bin/mpicxx MPI F77 compiler: /usr/lib/openmpi/bin/mpif77 MPI F90 compiler: /usr/lib/openmpi/bin/mpif90 building 'python-mpi' executable /usr/lib/openmpi/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c src/python.c -o build/temp.linux-i686-3.3/src/python.o creating build/lib.linux-i686-3.3/mpi4py/bin /usr/lib/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -Wl,-export-dynamic build/temp.linux-i686-3.3/src/python.o -L/usr/lib -L/usr/lib/python3.3/config-3.3m -Lbuild/temp.linux-i686-3.3 -lpython3.3m -o build/lib.linux-i686-3.3/mpi4py/bin/python-mpi -Wl,-z,relro -lpthread -ldl -lutil -lm + mv build openmpi + . /etc/profile.d/modules.sh ++++ /bin/ps -p 16343 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' openmpi-i386 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload openmpi-i386 ++ /usr/bin/modulecmd sh unload openmpi-i386 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 16343 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpich2-i386 ++ /usr/bin/modulecmd sh load mpich2-i386 + eval LD_LIBRARY_PATH=/usr/lib/mpich2/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpich2-i386' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/mpich2/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich2-i386' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-i386' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/mpich2' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich2-i386' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/mpich2/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich2' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich2' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich2' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich2-i386' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/mpich2' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpich2-i386' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib/mpich2/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpich2-i386 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib/mpich2/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich2-i386 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-i386 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib/mpich2 ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich2-i386 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib/mpich2/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich2 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich2 ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich2 ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich2-i386 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib/python2.7/site-packages/mpich2 ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpich2-i386 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + /usr/bin/python3 setup.py build running build running build_src running build_py creating build creating build/lib.linux-i686-3.3 creating build/lib.linux-i686-3.3/mpi4py copying src/rc.py -> build/lib.linux-i686-3.3/mpi4py copying src/__init__.py -> build/lib.linux-i686-3.3/mpi4py creating build/lib.linux-i686-3.3/mpi4py/include creating build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.h -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi_c.pxd -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/MPI.pxd -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pxd -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/__init__.pyx -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi.pxi -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py copying src/include/mpi4py/mpi4py.i -> build/lib.linux-i686-3.3/mpi4py/include/mpi4py running build_clib MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/mpich2/bin/mpicc MPI C++ compiler: /usr/lib/mpich2/bin/mpicxx MPI F77 compiler: /usr/lib/mpich2/bin/mpif77 MPI F90 compiler: /usr/lib/mpich2/bin/mpif90 checking for library 'mpe' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lmpe -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for library 'lmpe' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -llmpe -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for library 'pthread' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lpthread -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpe' dylib library creating build/temp.linux-i686-3.3 creating build/temp.linux-i686-3.3/src /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-mpe.c -o build/temp.linux-i686-3.3/src/pmpi-mpe.o creating build/lib.linux-i686-3.3/mpi4py/lib-pmpi /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/pmpi-mpe.o -o build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libmpe.so -Wl,-whole-archive -llmpe -Wl,-no-whole-archive -lmpe -lpthread checking for library 'vt-mpi' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-mpi -o _configtest /usr/bin/ld: cannot find -lvt-mpi collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'vt.mpi' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt.mpi -o _configtest /usr/bin/ld: cannot find -lvt.mpi collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt' dylib library /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt.c -o build/temp.linux-i686-3.3/src/pmpi-vt.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/pmpi-vt.o -o build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt.so checking for library 'vt-mpi' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-mpi -o _configtest /usr/bin/ld: cannot find -lvt-mpi collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt-mpi' dylib library /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt-mpi.c -o build/temp.linux-i686-3.3/src/pmpi-vt-mpi.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/pmpi-vt-mpi.o -o build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt-mpi.so checking for library 'vt-hyb' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -lvt-hyb -o _configtest /usr/bin/ld: cannot find -lvt-hyb collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt-hyb' dylib library /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -c src/pmpi-vt-hyb.c -o build/temp.linux-i686-3.3/src/pmpi-vt-hyb.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/pmpi-vt-hyb.o -o build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt-hyb.so running build_ext MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/mpich2/bin/mpicc MPI C++ compiler: /usr/lib/mpich2/bin/mpicxx MPI F77 compiler: /usr/lib/mpich2/bin/mpif77 MPI F90 compiler: /usr/lib/mpich2/bin/mpif90 checking for MPI compile and link ... checking for header 'mpi.h' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for missing MPI functions/symbols ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o checking for function 'MPI_Type_create_f90_integer' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_real' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_complex' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.MPI' extension /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c src/MPI.c -o build/temp.linux-i686-3.3/src/MPI.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/MPI.o -Lbuild/temp.linux-i686-3.3 -lpython3.3m -o build/lib.linux-i686-3.3/mpi4py/MPI.cpython-33m.so writing build/lib.linux-i686-3.3/mpi4py/mpi.cfg checking for MPE availability ... checking for library 'lmpe' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -llmpe -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for library 'mpe' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -lmpe -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for library 'pthread' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -lpthread -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for header 'mpe.h' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! checking for function 'MPE_Init_log' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -llmpe -lmpe -lpthread -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.MPE' extension /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -DHAVE_MPE=1 -I/usr/include/python3.3m -c src/MPE.c -o build/temp.linux-i686-3.3/src/MPE.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/MPE.o -Lbuild/temp.linux-i686-3.3 -lpython3.3m -o build/lib.linux-i686-3.3/mpi4py/MPE.cpython-33m.so -Wl,-whole-archive -llmpe -Wl,-no-whole-archive -lmpe -lpthread checking for dlopen() availability ... checking for header 'dlfcn.h' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! checking for library 'dl' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'dlopen' ... /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c _configtest.c -o _configtest.o /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables _configtest.o -Lbuild/temp.linux-i686-3.3 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.dl' extension /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -DHAVE_DLFCN_H=1 -DHAVE_DLOPEN=1 -I/usr/include/python3.3m -c src/dynload.c -o build/temp.linux-i686-3.3/src/dynload.o /usr/lib/mpich2/bin/mpicc -shared -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables build/temp.linux-i686-3.3/src/dynload.o -Lbuild/temp.linux-i686-3.3 -ldl -lpython3.3m -o build/lib.linux-i686-3.3/mpi4py/dl.cpython-33m.so running build_exe MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/lib/mpich2/bin/mpicc MPI C++ compiler: /usr/lib/mpich2/bin/mpicxx MPI F77 compiler: /usr/lib/mpich2/bin/mpif77 MPI F90 compiler: /usr/lib/mpich2/bin/mpif90 building 'python-mpi' executable /usr/lib/mpich2/bin/mpicc -fPIC -Wno-unused-result -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -I/usr/include/python3.3m -c src/python.c -o build/temp.linux-i686-3.3/src/python.o creating build/lib.linux-i686-3.3/mpi4py/bin /usr/lib/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -Wl,-export-dynamic build/temp.linux-i686-3.3/src/python.o -L/usr/lib -L/usr/lib/python3.3/config-3.3m -Lbuild/temp.linux-i686-3.3 -lpython3.3m -o build/lib.linux-i686-3.3/mpi4py/bin/python-mpi -Wl,-z,relro -lpthread -ldl -lutil -lm + mv build mpich2 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 16343 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpich2-i386 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpich2-i386 ++ /usr/bin/modulecmd sh unload mpich2-i386 ~/build/BUILD/mpi4py-1.3 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + popd + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.wPiLuO + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 ++ dirname /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 + cd mpi4py-1.3 + LANG=C + export LANG + unset DISPLAY + rm -rf /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 20210 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load openmpi-i386 ++ /usr/bin/modulecmd sh load openmpi-i386 + eval LD_LIBRARY_PATH=/usr/lib/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=openmpi-i386' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-i386:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-i386' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-i386' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-i386' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-i386' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-i386' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/openmpi-i386' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=openmpi-i386 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-i386:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-i386 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-i386 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-i386 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-i386 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-i386 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/openmpi-i386 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + mv openmpi build + /usr/bin/python setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 running install running install_lib creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7 creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/bin copying build/lib.linux-i686-2.7/mpi4py/bin/python-mpi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/bin copying build/lib.linux-i686-2.7/mpi4py/rc.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/MPI.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/dl.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/__init__.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/mpi.cfg -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/MPE.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi4py.MPI.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi_c.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/MPI.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/__init__.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi4py.i -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi.pxi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/__init__.pyx -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi4py.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt-hyb.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt-mpi.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libmpe.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/rc.py to rc.pyc byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/__init__.py to __init__.pyc writing byte-compilation script '/tmp/tmpBpAEX8.py' /usr/bin/python -O /tmp/tmpBpAEX8.py removing /tmp/tmpBpAEX8.py running install_egg_info Writing /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py-1.3-py2.7.egg-info + mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi + mv /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/ /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py-1.3-py2.7.egg-info /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi + mv build openmpi + . /etc/profile.d/modules.sh ++++ /bin/ps -p 20210 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' openmpi-i386 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload openmpi-i386 ++ /usr/bin/modulecmd sh unload openmpi-i386 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 20210 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpich2-i386 ++ /usr/bin/modulecmd sh load mpich2-i386 + eval LD_LIBRARY_PATH=/usr/lib/mpich2/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpich2-i386' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/mpich2/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich2-i386' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-i386' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/mpich2' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich2-i386' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/mpich2/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich2' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich2' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich2' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich2-i386' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/mpich2' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpich2-i386' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib/mpich2/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpich2-i386 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib/mpich2/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich2-i386 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-i386 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib/mpich2 ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich2-i386 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib/mpich2/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich2 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich2 ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich2 ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich2-i386 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib/python2.7/site-packages/mpich2 ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpich2-i386 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + mv mpich2 build + /usr/bin/python setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 running install running install_lib creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/bin copying build/lib.linux-i686-2.7/mpi4py/bin/python-mpi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/bin copying build/lib.linux-i686-2.7/mpi4py/rc.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/MPI.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/dl.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/__init__.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/mpi.cfg -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py copying build/lib.linux-i686-2.7/mpi4py/MPE.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi4py.MPI.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi_c.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/MPI.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/__init__.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi4py.i -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi.pxi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/__init__.pyx -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-2.7/mpi4py/include/mpi4py/mpi4py.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/include/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt-hyb.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt-mpi.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libmpe.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-2.7/mpi4py/lib-pmpi/libvt.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/lib-pmpi byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/rc.py to rc.pyc byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/__init__.py to __init__.pyc writing byte-compilation script '/tmp/tmpfKBJR5.py' /usr/bin/python -O /tmp/tmpfKBJR5.py removing /tmp/tmpfKBJR5.py running install_egg_info Writing /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py-1.3-py2.7.egg-info + mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2 + mv /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py/ /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpi4py-1.3-py2.7.egg-info /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2 + mv build mpich2 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 20210 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpich2-i386 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpich2-i386 ++ /usr/bin/modulecmd sh unload mpich2-i386 ~/build/BUILD/python3-mpi4py-1.3-5.fc18 ~/build/BUILD/mpi4py-1.3 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + pushd /builddir/build/BUILD/python3-mpi4py-1.3-5.fc18 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 20210 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load openmpi-i386 ++ /usr/bin/modulecmd sh load openmpi-i386 + eval LD_LIBRARY_PATH=/usr/lib/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=openmpi-i386' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-i386:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-i386' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-i386' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-i386' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-i386' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-i386' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/openmpi-i386' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=openmpi-i386 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-i386:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-i386 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-i386 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-i386 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-i386 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-i386 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/openmpi-i386 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + mv openmpi build + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 running install running install_lib creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3 creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/bin copying build/lib.linux-i686-3.3/mpi4py/bin/python-mpi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/bin copying build/lib.linux-i686-3.3/mpi4py/rc.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/MPI.cpython-33m.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/__init__.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/mpi.cfg -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/dl.cpython-33m.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/MPE.cpython-33m.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi4py.MPI.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi_c.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/MPI.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/__init__.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi4py.i -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi.pxi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/__init__.pyx -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi4py.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt-hyb.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt-mpi.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libmpe.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/rc.py to rc.cpython-33.pyc byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/__init__.py to __init__.cpython-33.pyc writing byte-compilation script '/tmp/tmp96xs4r.py' /usr/bin/python3 -O /tmp/tmp96xs4r.py removing /tmp/tmp96xs4r.py running install_egg_info Writing /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py-1.3-py3.3.egg-info + mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi + mv /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/ /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py-1.3-py3.3.egg-info /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi + mv build openmpi + . /etc/profile.d/modules.sh ++++ /bin/ps -p 20210 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' openmpi-i386 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload openmpi-i386 ++ /usr/bin/modulecmd sh unload openmpi-i386 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 20210 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpich2-i386 ++ /usr/bin/modulecmd sh load mpich2-i386 + eval LD_LIBRARY_PATH=/usr/lib/mpich2/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpich2-i386' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/mpich2/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich2-i386' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-i386' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/mpich2' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich2-i386' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/mpich2/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich2' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich2' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich2' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich2-i386' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/mpich2' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpich2-i386' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib/mpich2/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpich2-i386 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib/mpich2/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich2-i386 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-i386 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib/mpich2 ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich2-i386 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib/mpich2/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich2 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich2 ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich2 ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich2-i386 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ PYTHONPATH=/usr/lib/python2.7/site-packages/mpich2 ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpich2-i386 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i686 -mtune=atom -fasynchronous-unwind-tables' + mv mpich2 build + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 running install running install_lib creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/bin copying build/lib.linux-i686-3.3/mpi4py/bin/python-mpi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/bin copying build/lib.linux-i686-3.3/mpi4py/rc.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/MPI.cpython-33m.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/__init__.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/mpi.cfg -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/dl.cpython-33m.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py copying build/lib.linux-i686-3.3/mpi4py/MPE.cpython-33m.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi4py.MPI.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi_c.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/MPI.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/__init__.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi4py.i -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi.pxi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/__init__.pyx -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.3/mpi4py/include/mpi4py/mpi4py.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/include/mpi4py creating /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt-hyb.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt-mpi.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libmpe.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.3/mpi4py/lib-pmpi/libvt.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/lib-pmpi byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/rc.py to rc.cpython-33.pyc byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/__init__.py to __init__.cpython-33.pyc writing byte-compilation script '/tmp/tmpsfynfi.py' /usr/bin/python3 -O /tmp/tmpsfynfi.py removing /tmp/tmpsfynfi.py running install_egg_info Writing /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py-1.3-py3.3.egg-info + mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2 + mv /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py/ /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpi4py-1.3-py3.3.egg-info /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2 + mv build mpich2 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 20210 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpich2-i386 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpich2-i386 ++ /usr/bin/modulecmd sh unload mpich2-i386 ~/build/BUILD/mpi4py-1.3 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + popd + /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/mpi4py-1.3 extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2/mpi4py/bin/python-mpi extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2/mpi4py/MPI.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2/mpi4py/dl.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2/mpi4py/MPE.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2/mpi4py/lib-pmpi/libvt-hyb.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2/mpi4py/lib-pmpi/libvt-mpi.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2/mpi4py/lib-pmpi/libmpe.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/mpich2/mpi4py/lib-pmpi/libvt.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi/mpi4py/bin/python-mpi extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi/mpi4py/MPI.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi/mpi4py/dl.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi/mpi4py/MPE.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/libvt-hyb.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/libvt-mpi.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/libmpe.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2/mpi4py/bin/python-mpi extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2/mpi4py/MPI.cpython-33m.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2/mpi4py/dl.cpython-33m.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2/mpi4py/MPE.cpython-33m.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2/mpi4py/lib-pmpi/libvt-hyb.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2/mpi4py/lib-pmpi/libvt-mpi.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2/mpi4py/lib-pmpi/libmpe.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/mpich2/mpi4py/lib-pmpi/libvt.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi/mpi4py/bin/python-mpi extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi/mpi4py/MPI.cpython-33m.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi/mpi4py/dl.cpython-33m.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi/mpi4py/MPE.cpython-33m.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/libvt-hyb.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/libvt-mpi.so extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/libmpe.so 19204 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 Bytecompiling .py files below /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python2.7/ using /usr/bin/python2.7 Bytecompiling .py files below /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/lib/python3.3/ using /usr/bin/python3.3 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/lib/rpm/redhat/brp-java-repack-jars Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.9B1Nn4 + umask 022 + cd /builddir/build/BUILD + cd mpi4py-1.3 + unset DISPLAY + exit 0 Processing files: mpi4py-docs-1.3-5.fc18.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.h4Cblk + umask 022 + cd /builddir/build/BUILD + cd mpi4py-1.3 + DOCDIR=/builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/share/doc/mpi4py-docs-1.3 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/share/doc/mpi4py-docs-1.3 + cp -pr docs/HISTORY.html docs/LICENSE.html docs/THANKS.html docs/apiref docs/index.html docs/mpi4py.pdf docs/usrman demo /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/share/doc/mpi4py-docs-1.3 + exit 0 Finding Provides: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages.*\.so$' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u " Finding Requires(interp): Finding Requires(rpmlib): Finding Requires(verify): Finding Requires(pre): Finding Requires(post): Finding Requires(preun): Finding Requires(postun): Finding Requires: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u " Provides: mpi4py-docs = 1.3-5.fc18 Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Requires: /bin/sh Processing files: python3-mpi4py-openmpi-1.3-5.fc18.i686 Finding Provides: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages.*\.so$' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u " Finding Requires(interp): Finding Requires(rpmlib): Finding Requires(verify): Finding Requires(pre): Finding Requires(post): Finding Requires(preun): Finding Requires(postun): Finding Requires: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u " Provides: python3-mpi4py-runtime = 1.3-5.fc18 python3-mpi4py-openmpi = 1.3-5.fc18 python3-mpi4py-openmpi(x86-32) = 1.3-5.fc18 Requires(rpmlib): rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Requires: libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libdl.so.2 libdl.so.2(GLIBC_2.0) libdl.so.2(GLIBC_2.1) libmpi.so.1 libm.so.6 libpthread.so.0 libpython3.3m.so.1.0 libutil.so.1 python(abi) = 3.3 rtld(GNU_HASH) Processing files: python3-mpi4py-mpich2-1.3-5.fc18.i686 Finding Provides: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages.*\.so$' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u " Finding Requires(interp): Finding Requires(rpmlib): Finding Requires(verify): Finding Requires(pre): Finding Requires(post): Finding Requires(preun): Finding Requires(postun): Finding Requires: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u " Provides: python3-mpi4py-runtime = 1.3-5.fc18 python3-mpi4py-mpich2 = 1.3-5.fc18 python3-mpi4py-mpich2(x86-32) = 1.3-5.fc18 Requires(rpmlib): rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Requires: libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libdl.so.2 libdl.so.2(GLIBC_2.0) libdl.so.2(GLIBC_2.1) libmpich.so.3 libm.so.6 libpthread.so.0 libpthread.so.0(GLIBC_2.0) libpthread.so.0(GLIBC_2.2) libpython3.3m.so.1.0 libutil.so.1 python(abi) = 3.3 rtld(GNU_HASH) Processing files: mpi4py-common-1.3-5.fc18.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.i1M81c + umask 022 + cd /builddir/build/BUILD + cd mpi4py-1.3 + DOCDIR=/builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/share/doc/mpi4py-common-1.3 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/share/doc/mpi4py-common-1.3 + cp -pr HISTORY.txt LICENSE.txt /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386/usr/share/doc/mpi4py-common-1.3 + exit 0 Finding Provides: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages.*\.so$' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u " Finding Requires(interp): Finding Requires(rpmlib): Finding Requires(verify): Finding Requires(pre): Finding Requires(post): Finding Requires(preun): Finding Requires(postun): Finding Requires: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u " Provides: mpi4py-common = 1.3-5.fc18 Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Processing files: mpi4py-openmpi-1.3-5.fc18.i686 Finding Provides: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages.*\.so$' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u " Finding Requires(interp): Finding Requires(rpmlib): Finding Requires(verify): Finding Requires(pre): Finding Requires(post): Finding Requires(preun): Finding Requires(postun): Finding Requires: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u " Provides: python2-mpi4py-openmpi = 1.3-5.fc18 mpi4py-runtime = 1.3-5.fc18 mpi4py-openmpi = 1.3-5.fc18 mpi4py-openmpi(x86-32) = 1.3-5.fc18 Requires(rpmlib): rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Requires: libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libdl.so.2 libdl.so.2(GLIBC_2.0) libdl.so.2(GLIBC_2.1) libmpi.so.1 libm.so.6 libpthread.so.0 libpython2.7.so.1.0 libutil.so.1 python(abi) = 2.7 rtld(GNU_HASH) Processing files: mpi4py-mpich2-1.3-5.fc18.i686 Finding Provides: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages.*\.so$' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u " Finding Requires(interp): Finding Requires(rpmlib): Finding Requires(verify): Finding Requires(pre): Finding Requires(post): Finding Requires(preun): Finding Requires(postun): Finding Requires: /bin/sh -c " /usr/bin/grep -v '/usr/lib/python2.7/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /usr/bin/grep -v '/usr/lib/python3.3/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u " Provides: python2-mpi4py-mpich2 = 1.3-5.fc18 mpi4py-runtime = 1.3-5.fc18 mpi4py-mpich2 = 1.3-5.fc18 mpi4py-mpich2(x86-32) = 1.3-5.fc18 Requires(rpmlib): rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Requires: libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.2) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libdl.so.2 libdl.so.2(GLIBC_2.0) libdl.so.2(GLIBC_2.1) libmpich.so.3 libm.so.6 libpthread.so.0 libpthread.so.0(GLIBC_2.0) libpthread.so.0(GLIBC_2.2) libpython2.7.so.1.0 libutil.so.1 python(abi) = 2.7 rtld(GNU_HASH) Processing files: mpi4py-debuginfo-1.3-5.fc18.i686 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 Wrote: /builddir/build/RPMS/mpi4py-docs-1.3-5.fc18.noarch.rpm Wrote: /builddir/build/RPMS/python3-mpi4py-openmpi-1.3-5.fc18.i686.rpm Wrote: /builddir/build/RPMS/python3-mpi4py-mpich2-1.3-5.fc18.i686.rpm Wrote: /builddir/build/RPMS/mpi4py-common-1.3-5.fc18.noarch.rpm Wrote: /builddir/build/RPMS/mpi4py-openmpi-1.3-5.fc18.i686.rpm Wrote: /builddir/build/RPMS/mpi4py-mpich2-1.3-5.fc18.i686.rpm Wrote: /builddir/build/RPMS/mpi4py-debuginfo-1.3-5.fc18.i686.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.T1OiaG + umask 022 + cd /builddir/build/BUILD + cd mpi4py-1.3 + rm -rf /builddir/build/BUILDROOT/mpi4py-1.3-5.fc18.i386 + exit 0 Child return code was: 0 LEAVE do -->