Installing /builddir/build/SRPMS/R-BufferedMatrix-1.0.1-5.fc7.src.rpm Building target platforms: ppc Building for target ppc Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.80429 + umask 022 + cd /builddir/build/BUILD + LANG=C + export LANG + unset DISPLAY + cd /builddir/build/BUILD + rm -rf BufferedMatrix + /bin/mkdir -p BufferedMatrix + cd BufferedMatrix + /bin/gzip -dc /builddir/build/SOURCES/BufferedMatrix_1.0.1.tar.gz + tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' ++ /usr/bin/id -u + '[' 103 = 0 ']' ++ /usr/bin/id -u + '[' 103 = 0 ']' + /bin/chmod -Rf a+rX,u+w,g-w,o-w . + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.80429 + umask 022 + cd /builddir/build/BUILD + cd BufferedMatrix + LANG=C + export LANG + unset DISPLAY + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.80429 + umask 022 + cd /builddir/build/BUILD + cd BufferedMatrix + LANG=C + export LANG + unset DISPLAY + rm -rf /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder + sed -i -e 's/\r$//' BufferedMatrix/inst/doc/BufferedMatrix.Rnw + mkdir -p /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/share/R/library/BufferedMatrix/include/ + install -D BufferedMatrix/inst/include/doubleBufferedMatrix.h BufferedMatrix/inst/include/doubleBufferedMatrix_stubs.c /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/share/R/library/BufferedMatrix/include/ + chmod -x /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/share/R/library/BufferedMatrix/include/doubleBufferedMatrix.h /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/share/R/library/BufferedMatrix/include/doubleBufferedMatrix_stubs.c + mkdir -p /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/lib/R/library + R CMD INSTALL BufferedMatrix -l /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/lib/R/library * Installing *source* package 'BufferedMatrix' ... ** libs gcc -std=gnu99 -I/usr/lib/R/include -I/usr/lib/R/include -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -c RBufferedMatrix.c -o RBufferedMatrix.o gcc -std=gnu99 -I/usr/lib/R/include -I/usr/lib/R/include -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -c doubleBufferedMatrix.c -o doubleBufferedMatrix.o doubleBufferedMatrix.c:3323: warning: 'sort_double' defined but not used gcc -std=gnu99 -I/usr/lib/R/include -I/usr/lib/R/include -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -c doubleBufferedMatrix_C_tests.c -o doubleBufferedMatrix_C_tests.o doubleBufferedMatrix_C_tests.c: In function 'dbm_c_tester': doubleBufferedMatrix_C_tests.c:26: warning: implicit declaration of function 'Rprintf' gcc -std=gnu99 -I/usr/lib/R/include -I/usr/lib/R/include -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -c init_package.c -o init_package.o gcc -std=gnu99 -shared -L/usr/local/lib -o BufferedMatrix.so RBufferedMatrix.o doubleBufferedMatrix.o doubleBufferedMatrix_C_tests.o init_package.o -L/usr/lib/R/lib -lR ** R ** inst ** save image [1] "buffer.dim" [1] "is.ColMode" [1] "is.RowMode" [1] "RowMode" [1] "ColMode" [1] "set.buffer.dim" [1] "prefix" [1] "directory" [1] "filenames" [1] "duplicate" [1] "ewApply" [1] "pow" [1] "Max" [1] "Min" [1] "Sum" [1] "Var" [1] "Sd" [1] "rowMeans" [1] "rowSums" [1] "rowVars" [1] "rowSd" [1] "rowMax" [1] "rowMin" [1] "colMeans" [1] "colSums" [1] "colVars" [1] "colSd" [1] "colMax" [1] "colMin" [1] "colMedians" [1] "colRanges" [1] "colApply" [1] "rowApply" [1] "subBufferedMatrix" [1] "rownames" [1] "colnames" [1] "colnames<-" [1] "rownames<-" [1] "ReadOnlyMode" [1] "is.ReadOnlyMode" [1] "memory.usage" [1] "disk.usage" [1] "AddColumn" [1] "BufferedMatrix" [1] "dim" [1] "buffer.dim" [1] "[" [1] "[<-" [1] "show" Creating a new generic function for "ncol" in "BufferedMatrix" [1] "ncol" Creating a new generic function for "nrow" in "BufferedMatrix" [1] "nrow" [1] "is.ColMode" [1] "is.RowMode" [1] "RowMode" [1] "ColMode" [1] "set.buffer.dim" [1] "prefix" [1] "directory" [1] "filenames" [1] "duplicate" [1] "ewApply" [1] "sqrt" [1] "exp" Creating a new generic function for "log" in "BufferedMatrix" [1] "log" [1] "pow" [1] "Max" [1] "Min" Creating a new generic function for "mean" in "BufferedMatrix" [1] "mean" [1] "Sum" [1] "Var" [1] "Sd" [1] "rowMeans" [1] "rowSums" [1] "rowVars" [1] "rowSd" [1] "rowMax" [1] "rowMin" [1] "colMeans" [1] "colSums" [1] "colVars" [1] "colSd" [1] "colMax" [1] "colMin" [1] "colMedians" [1] "colRanges" [1] "colApply" [1] "rowApply" Creating a new generic function for "as.matrix" in "BufferedMatrix" [1] "as.matrix" [1] "subBufferedMatrix" [1] "rownames" [1] "colnames" [1] "colnames<-" [1] "rownames<-" [1] "dimnames" [1] "dimnames<-" [1] "ReadOnlyMode" [1] "is.ReadOnlyMode" [1] "memory.usage" [1] "disk.usage" [1] "AddColumn" ** help >>> Building/Updating help pages for package 'BufferedMatrix' Formats: text html latex example BufferedMatrix-class text html latex as.BufferedMatrix text html latex createBufferedMatrix text html latex example ** building package indices ... * DONE (BufferedMatrix) + test -d BufferedMatrix/src + cd BufferedMatrix/src + rm -f RBufferedMatrix.o doubleBufferedMatrix.o doubleBufferedMatrix_C_tests.o init_package.o BufferedMatrix.so + rm -rf /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/lib/R/library/R.css + rm -rf /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/lib/R/library/BufferedMatrix/include/ + /usr/lib/rpm/find-debuginfo.sh /builddir/build/BUILD/BufferedMatrix extracting debug info from /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder/usr/lib/R/library/BufferedMatrix/libs/BufferedMatrix.so cpio: gcc-4.1.2-20070503/obj-ppc64-redhat-linux/gcc/crtsavres.S: No such file or directory 284 blocks + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/brp-python-bytecompile + /usr/lib/rpm/redhat/brp-java-repack-jars Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.91469 + umask 022 + cd /builddir/build/BUILD + cd BufferedMatrix + /usr/bin/R CMD check BufferedMatrix * checking for working latex ... OK * using log directory '/builddir/build/BUILD/BufferedMatrix/BufferedMatrix.Rcheck' * using R version 2.5.1 (2007-06-27) * checking for file 'BufferedMatrix/DESCRIPTION' ... OK * this is package 'BufferedMatrix' version '1.0.1' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'BufferedMatrix' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable use of $BLAS_LIBS ... OK * creating BufferedMatrix-Ex.R ... OK * checking examples ... OK * checking tests ... make[1]: Entering directory `/builddir/build/BUILD/BufferedMatrix/BufferedMatrix.Rcheck/tests' Running 'Rcodetesting.R' Running 'c_code_level_tests.R' Running 'objectTesting.R' Running 'rawCalltesting.R' make[1]: Leaving directory `/builddir/build/BUILD/BufferedMatrix/BufferedMatrix.Rcheck/tests' OK * checking package vignettes in 'inst/doc' ... OK * creating BufferedMatrix-manual.tex ... OK * checking BufferedMatrix-manual.tex ... OK + exit 0 Processing files: R-BufferedMatrix-1.0.1-5.fc7 Provides: BufferedMatrix.so Requires(interp): /bin/sh /bin/sh Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /bin/sh R Requires(postun): /bin/sh R Requires: libR.so libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.4) rtld(GNU_HASH) Processing files: R-BufferedMatrix-devel-1.0.1-5.fc7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R-BufferedMatrix = 1.0.1 Processing files: R-BufferedMatrix-debuginfo-1.0.1-5.fc7 Provides: BufferedMatrix.so.debug Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder warning: Could not canonicalize hostname: ppc1.fedora.redhat.com Wrote: /builddir/build/RPMS/R-BufferedMatrix-1.0.1-5.fc7.ppc.rpm Wrote: /builddir/build/RPMS/R-BufferedMatrix-devel-1.0.1-5.fc7.ppc.rpm Wrote: /builddir/build/RPMS/R-BufferedMatrix-debuginfo-1.0.1-5.fc7.ppc.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.82725 + umask 022 + cd /builddir/build/BUILD + cd BufferedMatrix + rm -rf /var/tmp/R-BufferedMatrix-1.0.1-5.fc7-root-kojibuilder + exit 0 Executing(--clean): /bin/sh -e /var/tmp/rpm-tmp.82725 + umask 022 + cd /builddir/build/BUILD + rm -rf BufferedMatrix + exit 0