Mock Version: 2.3 Mock Version: 2.3 Mock Version: 2.3 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/votca-csg.spec'], chrootPath='/var/lib/mock/f33-build-22002227-1833053/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/votca-csg.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1596499200 Wrote: /builddir/build/SRPMS/votca-csg-1.6.1-5.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/votca-csg.spec'], chrootPath='/var/lib/mock/f33-build-22002227-1833053/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/votca-csg.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1596499200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.sWZFEc + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf csg-1.6.1 + /usr/bin/gzip -dc /builddir/build/SOURCES/votca-csg-1.6.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd csg-1.6.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (573.patch):' Patch #0 (573.patch): + /usr/bin/patch --no-backup-if-mismatch -p1 --fuzz=0 patching file src/tools/CMakeLists.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.aMwO7d + umask 022 + cd /builddir/build/BUILD + cd csg-1.6.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B aarch64-redhat-linux-gnu -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_BUILD_TYPE=Release -DENABLE_TESTING=ON -DREGRESSIONTEST_TOLERANCE=3e-5 -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found TXT2TAGS: /usr/bin/txt2tags -- Found UnixCommands: /usr/bin/bash -- Found Boost: /usr/include (found suitable version "1.73.0", minimum required is "1.53.0") found components: program_options filesystem system -- Found Eigen3: /usr/share/eigen3 -- Found Boost: /usr/include (found suitable version "1.73.0", minimum required is "1.53.0") found components: program_options -- Found VOTCA_TOOLS: /usr/lib64/cmake/VOTCA_TOOLS -- Found PkgConfig: /usr/bin/pkg-config (found version "1.7.3") -- Checking for module 'libgromacs_d' -- Found libgromacs_d, version 2019.6 -- Checking for module 'libgromacs' -- Found libgromacs, version 2019.6 -- Looking for c++ gmx_version in /usr/lib64/libgromacs_d.so -- Looking for c++ gmx_version in /usr/lib64/libgromacs_d.so - found -- Looking for c++ gmx_is_single_precision in /usr/lib64/libgromacs_d.so -- Looking for c++ gmx_is_single_precision in /usr/lib64/libgromacs_d.so - not found -- Looking for c++ gmx_is_double_precision in /usr/lib64/libgromacs_d.so -- Looking for c++ gmx_is_double_precision in /usr/lib64/libgromacs_d.so - found -- Found GROMACS: /usr/lib64/libgromacs_d.so (found suitable version "2019.6", minimum required is "2018") -- Could NOT find GMX (missing: GMX_EXECUTABLE) -- Looking for assert.h -- Looking for assert.h - found -- Looking for C++ include algorithm -- Looking for C++ include algorithm - found -- Looking for C++ include fstream -- Looking for C++ include fstream - found -- Looking for C++ include iomanip -- Looking for C++ include iomanip - found -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Looking for C++ include list -- Looking for C++ include list - found -- Looking for C++ include map -- Looking for C++ include map - found -- Looking for C++ include numeric -- Looking for C++ include numeric - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for C++ include stdexcept -- Looking for C++ include stdexcept - found -- Looking for C++ include string -- Looking for C++ include string - found -- Looking for C++ include vector -- Looking for C++ include vector - found -- Looking for C++ include cstdlib -- Looking for C++ include cstdlib - found -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.10.6") found components: C -- Found Boost: /usr/include (found suitable version "1.73.0", minimum required is "1.53.0") found components: unit_test_framework -- Could NOT find LMP (missing: LMP_EXECUTABLE) -- The following OPTIONAL packages have been found: * TXT2TAGS * PkgConfig * UnixCommands * HDF5 -- The following REQUIRED packages have been found: * Threads * Eigen3 * VOTCA_TOOLS * GROMACS (required version >= 2018) * Boost (required version >= 1.53.0) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu + /usr/bin/cmake --build aarch64-redhat-linux-gnu -j5 --verbose /usr/bin/cmake -S/builddir/build/BUILD/csg-1.6.1 -B/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/CMakeFiles /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f share/man/CMakeFiles/votca-csg_manpage.dir/build.make share/man/CMakeFiles/votca-csg_manpage.dir/depend /usr/bin/gmake -f scripts/CMakeFiles/help2t2t_build.dir/build.make scripts/CMakeFiles/help2t2t_build.dir/depend /usr/bin/gmake -f src/libcsg/CMakeFiles/gitversion-csg.dir/build.make src/libcsg/CMakeFiles/gitversion-csg.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/share/man /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man/CMakeFiles/votca-csg_manpage.dir/DependInfo.cmake --color= gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/help2t2t_build.dir/DependInfo.cmake --color= /usr/bin/gmake -f scripts/CMakeFiles/csg_inverse_build.dir/build.make scripts/CMakeFiles/csg_inverse_build.dir/depend /usr/bin/gmake -f scripts/CMakeFiles/csg_call_build.dir/build.make scripts/CMakeFiles/csg_call_build.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/libcsg /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/gitversion-csg.dir/DependInfo.cmake --color= gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_inverse_build.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man/CMakeFiles/votca-csg_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man/CMakeFiles/votca-csg_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/help2t2t_build.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/help2t2t_build.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/help2t2t_build.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man/CMakeFiles/votca-csg_manpage.dir/depend.internal". Scanning dependencies of target help2t2t_build Scanning dependencies of target votca-csg_manpage Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_inverse_build.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_inverse_build.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_inverse_build.dir/depend.internal". gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/gitversion-csg.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/gitversion-csg.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/gitversion-csg.dir/depend.internal". /usr/bin/gmake -f scripts/CMakeFiles/help2t2t_build.dir/build.make scripts/CMakeFiles/help2t2t_build.dir/build Scanning dependencies of target csg_inverse_build Scanning dependencies of target gitversion-csg gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_call_build.dir/DependInfo.cmake --color= /usr/bin/gmake -f share/man/CMakeFiles/votca-csg_manpage.dir/build.make share/man/CMakeFiles/votca-csg_manpage.dir/build /usr/bin/gmake -f src/libcsg/CMakeFiles/gitversion-csg.dir/build.make src/libcsg/CMakeFiles/gitversion-csg.dir/build /usr/bin/gmake -f scripts/CMakeFiles/csg_inverse_build.dir/build.make scripts/CMakeFiles/csg_inverse_build.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/cmake -DTOP_SOURCE_DIR="/builddir/build/BUILD/csg-1.6.1" -DGIT_EXECUTABLE="" -P /builddir/build/BUILD/csg-1.6.1/CMakeModules/gitversion.cmake gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_call_build.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_call_build.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_call_build.dir/depend.internal". Scanning dependencies of target csg_call_build [ 0%] Generating help2t2t, ALL cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/cmake -DINPUT="help2t2t.out" -DOUTPUT="help2t2t" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/builddir/build/BUILD/csg-1.6.1" -P /builddir/build/BUILD/csg-1.6.1/CMakeModules/gitscript.cmake [ 1%] Building votca-csg manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f scripts/CMakeFiles/csg_call_build.dir/build.make scripts/CMakeFiles/csg_call_build.dir/build cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man && /usr/bin/txt2tags -q -t man -i /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man/votca-csg.t2t -o /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/man/votca-csg.man gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 2%] Generating csg_inverse cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/cmake -DINPUT="csg_inverse.out" -DOUTPUT="csg_inverse" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/builddir/build/BUILD/csg-1.6.1" -P /builddir/build/BUILD/csg-1.6.1/CMakeModules/gitscript.cmake [ 2%] Generating csg_call cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/cmake -DINPUT="csg_call.out" -DOUTPUT="csg_call" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/builddir/build/BUILD/csg-1.6.1" -P /builddir/build/BUILD/csg-1.6.1/CMakeModules/gitscript.cmake gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 2%] Built target gitversion-csg /usr/bin/gmake -f src/libcsg/CMakeFiles/votca_csg.dir/build.make src/libcsg/CMakeFiles/votca_csg.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/libcsg /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/votca_csg.dir/DependInfo.cmake --color= [ 2%] Built target help2t2t_build /usr/bin/gmake -f scripts/CMakeFiles/csg_inverse_manpage.dir/build.make scripts/CMakeFiles/csg_inverse_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_inverse_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/votca_csg.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/votca_csg.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg/CMakeFiles/votca_csg.dir/depend.internal". gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 2%] Built target csg_call_build [ 2%] Built target csg_inverse_build /usr/bin/gmake -f scripts/CMakeFiles/csg_call_manpage.dir/build.make scripts/CMakeFiles/csg_call_manpage.dir/depend Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_inverse_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_inverse_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_inverse_manpage.dir/depend.internal". Scanning dependencies of target csg_inverse_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f scripts/CMakeFiles/csg_inverse_manpage.dir/build.make scripts/CMakeFiles/csg_inverse_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_call_manpage.dir/DependInfo.cmake --color= gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 2%] Generating csg_inverse.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/cmake -E env VOTCASHARE=/builddir/build/BUILD/csg-1.6.1/share /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/csg_inverse --help > csg_inverse.help Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_call_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_call_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/CMakeFiles/csg_call_manpage.dir/depend.internal". Scanning dependencies of target csg_call_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f scripts/CMakeFiles/csg_call_manpage.dir/build.make scripts/CMakeFiles/csg_call_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 3%] Generating csg_call.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/cmake -E env VOTCASHARE=/builddir/build/BUILD/csg-1.6.1/share /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/csg_call --help > csg_call.help gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/help2t2t csg_inverse.help > csg_inverse.t2t Scanning dependencies of target votca_csg [ 3%] Built target votca-csg_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/libcsg/CMakeFiles/votca_csg.dir/build.make src/libcsg/CMakeFiles/votca_csg.dir/build cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts/help2t2t csg_call.help > csg_call.t2t gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 4%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/beadlist.cc.o [ 5%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/beadmotif.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/beadlist.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/beadlist.cc [ 5%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/beadmotif.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/beadmotif.cc cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/beadmotifalgorithms.cc cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/txt2tags -q -t man -i csg_call.t2t -o csg_call.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/scripts && /usr/bin/txt2tags -q -t man -i csg_inverse.t2t -o csg_inverse.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 6%] Built target csg_call_manpage [ 7%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/beadmotifconnector.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 8%] Built target csg_inverse_manpage [ 9%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/beadstructurealgorithms.cc [ 9%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/boundarycondition.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/boundarycondition.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/boundarycondition.cc [ 10%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/cgengine.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/cgengine.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/cgengine.cc [ 11%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/cgmoleculedef.cc [ 12%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/csgapplication.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/csgapplication.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/csgapplication.cc [ 12%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/exclusionlist.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/exclusionlist.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/exclusionlist.cc [ 13%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/imcio.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/imcio.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/imcio.cc [ 14%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/map.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/map.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/map.cc [ 15%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/molecule.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/molecule.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/molecule.cc [ 15%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/nblist.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/nblist.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/nblist.cc [ 16%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/nblist_3body.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/nblist_3body.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/nblist_3body.cc [ 17%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/nblistgrid.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/nblistgrid.cc [ 17%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/nblistgrid_3body.cc [ 18%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/nematicorder.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/nematicorder.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/nematicorder.cc [ 19%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/openbox.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/openbox.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/openbox.cc [ 20%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/orthorhombicbox.cc [ 20%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunction.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunction.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/potentialfunctions/potentialfunction.cc [ 21%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/potentialfunctions/potentialfunctioncbspl.cc [ 22%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionlj126.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionlj126.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/potentialfunctions/potentialfunctionlj126.cc [ 22%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/potentialfunctions/potentialfunctionljg.cc [ 23%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/topology.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/topology.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/topology.cc [ 24%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/topologymap.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/topologymap.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/topologymap.cc [ 25%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/topologyreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/topologyreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/topologyreader.cc [ 25%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/trajectoryreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/trajectoryreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/trajectoryreader.cc [ 26%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/trajectorywriter.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/trajectorywriter.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/trajectorywriter.cc [ 27%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/triclinicbox.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/triclinicbox.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/triclinicbox.cc [ 28%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/version.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/version.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/version.cc [ 28%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/dlpolytopologyreader.cc [ 29%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/dlpolytrajectoryreader.cc [ 30%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectorywriter.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectorywriter.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/dlpolytrajectorywriter.cc [ 30%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/groreader.cc [ 31%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/growriter.cc [ 32%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/lammpsdatareader.cc [ 33%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdumpreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/lammpsdumpreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/lammpsdumpreader.cc [ 33%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdumpwriter.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/lammpsdumpwriter.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/lammpsdumpwriter.cc [ 34%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/pdbreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/pdbreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/pdbreader.cc [ 35%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/pdbwriter.cc [ 36%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/xmltopologyreader.cc [ 36%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xyzreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/xyzreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/xyzreader.cc [ 37%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/xyzwriter.cc [ 38%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/gmxtopologyreader.cc [ 38%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtrajectoryreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/gmxtrajectoryreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/gmxtrajectoryreader.cc [ 39%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtrajectorywriter.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/gmxtrajectorywriter.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/gmxtrajectorywriter.cc [ 40%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/modules/io/h5mdtrajectoryreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/g++ -Dvotca_csg_EXPORTS -I/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -DGMX_DOUBLE=1 -std=c++14 -o CMakeFiles/votca_csg.dir/modules/io/h5mdtrajectoryreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/libcsg/modules/io/h5mdtrajectoryreader.cc [ 41%] Linking CXX shared library libvotca_csg.so cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/cmake -E cmake_link_script CMakeFiles/votca_csg.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libvotca_csg.so.6 -o libvotca_csg.so.6 CMakeFiles/votca_csg.dir/beadlist.cc.o CMakeFiles/votca_csg.dir/beadmotif.cc.o CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o CMakeFiles/votca_csg.dir/boundarycondition.cc.o CMakeFiles/votca_csg.dir/cgengine.cc.o CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o CMakeFiles/votca_csg.dir/csgapplication.cc.o CMakeFiles/votca_csg.dir/exclusionlist.cc.o CMakeFiles/votca_csg.dir/imcio.cc.o CMakeFiles/votca_csg.dir/map.cc.o CMakeFiles/votca_csg.dir/molecule.cc.o CMakeFiles/votca_csg.dir/nblist.cc.o CMakeFiles/votca_csg.dir/nblist_3body.cc.o CMakeFiles/votca_csg.dir/nblistgrid.cc.o CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o CMakeFiles/votca_csg.dir/nematicorder.cc.o CMakeFiles/votca_csg.dir/openbox.cc.o CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunction.cc.o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionlj126.cc.o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o CMakeFiles/votca_csg.dir/topology.cc.o CMakeFiles/votca_csg.dir/topologymap.cc.o CMakeFiles/votca_csg.dir/topologyreader.cc.o CMakeFiles/votca_csg.dir/trajectoryreader.cc.o CMakeFiles/votca_csg.dir/trajectorywriter.cc.o CMakeFiles/votca_csg.dir/triclinicbox.cc.o CMakeFiles/votca_csg.dir/version.cc.o CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectorywriter.cc.o CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o CMakeFiles/votca_csg.dir/modules/io/lammpsdumpreader.cc.o CMakeFiles/votca_csg.dir/modules/io/lammpsdumpwriter.cc.o CMakeFiles/votca_csg.dir/modules/io/pdbreader.cc.o CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o CMakeFiles/votca_csg.dir/modules/io/xyzreader.cc.o CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o CMakeFiles/votca_csg.dir/modules/io/gmxtrajectoryreader.cc.o CMakeFiles/votca_csg.dir/modules/io/gmxtrajectorywriter.cc.o CMakeFiles/votca_csg.dir/modules/io/h5mdtrajectoryreader.cc.o /usr/lib64/libgromacs_d.so /usr/lib64/libhdf5.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so /usr/lib64/libboost_filesystem.so /usr/lib64/libboost_system.so -lpthread cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg && /usr/bin/cmake -E cmake_symlink_library libvotca_csg.so.6 libvotca_csg.so.6 libvotca_csg.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 41%] Built target votca_csg /usr/bin/gmake -f src/tools/CMakeFiles/csg_density.dir/build.make src/tools/CMakeFiles/csg_density.dir/depend /usr/bin/gmake -f src/tools/CMakeFiles/csg_gmxtopol.dir/build.make src/tools/CMakeFiles/csg_gmxtopol.dir/depend /usr/bin/gmake -f src/tools/CMakeFiles/csg_dlptopol.dir/build.make src/tools/CMakeFiles/csg_dlptopol.dir/depend /usr/bin/gmake -f src/tools/CMakeFiles/csg_fmatch.dir/build.make src/tools/CMakeFiles/csg_fmatch.dir/depend /usr/bin/gmake -f src/tools/CMakeFiles/csg_property.dir/build.make src/tools/CMakeFiles/csg_property.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_gmxtopol.dir/DependInfo.cmake --color= cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_density.dir/DependInfo.cmake --color= gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dlptopol.dir/DependInfo.cmake --color= gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_fmatch.dir/DependInfo.cmake --color= gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_property.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_gmxtopol.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_gmxtopol.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_density.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_density.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_density.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_gmxtopol.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dlptopol.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dlptopol.dir/depend.internal". Scanning dependencies of target csg_density Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dlptopol.dir/depend.internal". Scanning dependencies of target csg_gmxtopol gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_density.dir/build.make src/tools/CMakeFiles/csg_density.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_fmatch.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_fmatch.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_fmatch.dir/depend.internal". /usr/bin/gmake -f src/tools/CMakeFiles/csg_gmxtopol.dir/build.make src/tools/CMakeFiles/csg_gmxtopol.dir/build Scanning dependencies of target csg_dlptopol Scanning dependencies of target csg_fmatch gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_dlptopol.dir/build.make src/tools/CMakeFiles/csg_dlptopol.dir/build /usr/bin/gmake -f src/tools/CMakeFiles/csg_fmatch.dir/build.make src/tools/CMakeFiles/csg_fmatch.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_property.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_property.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_property.dir/depend.internal". Scanning dependencies of target csg_property gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_property.dir/build.make src/tools/CMakeFiles/csg_property.dir/build [ 42%] Building CXX object src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_density.dir/csg_density.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_density.cc [ 43%] Building CXX object src/tools/CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 43%] Building CXX object src/tools/CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_dlptopol.cc cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_gmxtopol.cc [ 44%] Building CXX object src/tools/CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o [ 45%] Building CXX object src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_fmatch.cc cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_property.dir/csg_property.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_property.cc [ 46%] Linking CXX executable csg_property cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_property.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_property.dir/csg_property.cc.o -o csg_property -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 46%] Built target csg_property /usr/bin/gmake -f src/tools/CMakeFiles/csg_reupdate.dir/build.make src/tools/CMakeFiles/csg_reupdate.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_reupdate.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_reupdate.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_reupdate.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_reupdate.dir/depend.internal". Scanning dependencies of target csg_reupdate gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_reupdate.dir/build.make src/tools/CMakeFiles/csg_reupdate.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 46%] Building CXX object src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_reupdate.cc [ 47%] Linking CXX executable csg_gmxtopol cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_gmxtopol.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -o csg_gmxtopol -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 47%] Linking CXX executable csg_density cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_density.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_density.dir/csg_density.cc.o -o csg_density -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 47%] Linking CXX executable csg_dlptopol cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_dlptopol.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -o csg_dlptopol -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 47%] Built target csg_gmxtopol /usr/bin/gmake -f src/tools/CMakeFiles/csg_resample.dir/build.make src/tools/CMakeFiles/csg_resample.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_resample.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_resample.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_resample.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_resample.dir/depend.internal". Scanning dependencies of target csg_resample gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_resample.dir/build.make src/tools/CMakeFiles/csg_resample.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 48%] Building CXX object src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_resample.dir/csg_resample.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_resample.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 48%] Built target csg_density /usr/bin/gmake -f src/tools/CMakeFiles/csg_imc_solve.dir/build.make src/tools/CMakeFiles/csg_imc_solve.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_imc_solve.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_imc_solve.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_imc_solve.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_imc_solve.dir/depend.internal". Scanning dependencies of target csg_imc_solve gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_imc_solve.dir/build.make src/tools/CMakeFiles/csg_imc_solve.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 48%] Building CXX object src/tools/CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_imc_solve.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 48%] Built target csg_dlptopol /usr/bin/gmake -f src/tools/CMakeFiles/csg_map.dir/build.make src/tools/CMakeFiles/csg_map.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_map.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_map.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_map.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_map.dir/depend.internal". Scanning dependencies of target csg_map gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_map.dir/build.make src/tools/CMakeFiles/csg_map.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 49%] Building CXX object src/tools/CMakeFiles/csg_map.dir/csg_map.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_map.dir/csg_map.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_map.cc [ 50%] Linking CXX executable csg_resample cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_resample.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_resample.dir/csg_resample.cc.o -o csg_resample -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 50%] Built target csg_resample /usr/bin/gmake -f src/tools/CMakeFiles/csg_dump.dir/build.make src/tools/CMakeFiles/csg_dump.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dump.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dump.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dump.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dump.dir/depend.internal". Scanning dependencies of target csg_dump gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_dump.dir/build.make src/tools/CMakeFiles/csg_dump.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 51%] Building CXX object src/tools/CMakeFiles/csg_dump.dir/csg_dump.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_dump.dir/csg_dump.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_dump.cc [ 52%] Linking CXX executable csg_map cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_map.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_map.dir/csg_map.cc.o -o csg_map -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 53%] Linking CXX executable csg_reupdate cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_reupdate.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -o csg_reupdate -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 54%] Linking CXX executable csg_fmatch cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_fmatch.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -o csg_fmatch -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 54%] Built target csg_map /usr/bin/gmake -f src/tools/CMakeFiles/csg_stat.dir/build.make src/tools/CMakeFiles/csg_stat.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_stat.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_stat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_stat.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_stat.dir/depend.internal". Scanning dependencies of target csg_stat gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_stat.dir/build.make src/tools/CMakeFiles/csg_stat.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 54%] Building CXX object src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_stat.dir/csg_stat.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_stat.cc [ 55%] Linking CXX executable csg_dump cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_dump.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_dump.dir/csg_dump.cc.o -o csg_dump -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 56%] Linking CXX executable csg_imc_solve cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_imc_solve.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -o csg_imc_solve -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 56%] Built target csg_dump gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 56%] Built target csg_reupdate /usr/bin/gmake -f src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/csg_boltzmann /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/depend.internal". Scanning dependencies of target votca_csg_boltzmann gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 56%] Building CXX object src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/csg_boltzmann/bondedstatistics.cc [ 57%] Building CXX object src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/csg_boltzmann/stdanalysis.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 57%] Built target csg_imc_solve /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/depend.internal". Scanning dependencies of target unit_test_nblistgrid_3body gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 57%] Building CXX object src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_nblistgrid_3body.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 57%] Built target csg_fmatch /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make src/tests/CMakeFiles/unit_test_pdbreader.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_pdbreader.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_pdbreader.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_pdbreader.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_pdbreader.dir/depend.internal". Scanning dependencies of target unit_test_pdbreader gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make src/tests/CMakeFiles/unit_test_pdbreader.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 58%] Building CXX object src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_pdbreader.cc In file included from /usr/include/boost/config/header_deprecated.hpp:18, from /usr/include/boost/test/floating_point_comparison.hpp:13, from /builddir/build/BUILD/csg-1.6.1/src/tests/test_pdbreader.cc:21: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ [ 59%] Building CXX object src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tools/csg_stat_imc.cc [ 60%] Building CXX object src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/csg_boltzmann/tabulatedpotential.cc /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make src/tests/CMakeFiles/unit_test_nblist_3body.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_nblist_3body.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_nblist_3body.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_nblist_3body.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_nblist_3body.dir/depend.internal". Scanning dependencies of target unit_test_nblist_3body gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make src/tests/CMakeFiles/unit_test_nblist_3body.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 61%] Building CXX object src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_nblist_3body.cc [ 62%] Linking CXX executable unit_test_nblistgrid_3body cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_nblistgrid_3body.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -o unit_test_nblistgrid_3body -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 62%] Linking CXX executable unit_test_pdbreader cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_pdbreader.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -o unit_test_pdbreader -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 62%] Built target unit_test_nblistgrid_3body /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make src/tests/CMakeFiles/unit_test_csg_topology.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_csg_topology.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_csg_topology.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_csg_topology.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_csg_topology.dir/depend.internal". Scanning dependencies of target unit_test_csg_topology gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make src/tests/CMakeFiles/unit_test_csg_topology.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 63%] Building CXX object src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_csg_topology.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 63%] Built target unit_test_pdbreader /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/depend.internal". Scanning dependencies of target unit_test_lammpsdumpreaderwriter gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 63%] Building CXX object src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_lammpsdumpreaderwriter.cc [ 64%] Linking CXX static library libvotca_csg_boltzmann.a cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/cmake -P CMakeFiles/votca_csg_boltzmann.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/cmake -E cmake_link_script CMakeFiles/votca_csg_boltzmann.dir/link.txt --verbose=1 /usr/bin/ar qc libvotca_csg_boltzmann.a CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o /usr/bin/ranlib libvotca_csg_boltzmann.a gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 64%] Built target votca_csg_boltzmann /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make src/tests/CMakeFiles/unit_test_beadtriple.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadtriple.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadtriple.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadtriple.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadtriple.dir/depend.internal". Scanning dependencies of target unit_test_beadtriple gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make src/tests/CMakeFiles/unit_test_beadtriple.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 65%] Building CXX object src/tests/CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_beadtriple.cc In file included from /usr/include/boost/config/header_deprecated.hpp:18, from /usr/include/boost/test/floating_point_comparison.hpp:13, from /builddir/build/BUILD/csg-1.6.1/src/tests/test_csg_topology.cc:21: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Linking CXX executable unit_test_nblist_3body cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_nblist_3body.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -o unit_test_nblist_3body -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 67%] Linking CXX executable csg_stat cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_stat.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_stat.dir/csg_stat.cc.o CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -o csg_stat -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 67%] Built target unit_test_nblist_3body /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_bead.dir/build.make src/tests/CMakeFiles/unit_test_bead.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_bead.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_bead.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_bead.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_bead.dir/depend.internal". Scanning dependencies of target unit_test_bead gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_bead.dir/build.make src/tests/CMakeFiles/unit_test_bead.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 67%] Building CXX object src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_bead.dir/test_bead.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_bead.cc In file included from /usr/include/boost/config/header_deprecated.hpp:18, from /usr/include/boost/test/floating_point_comparison.hpp:13, from /builddir/build/BUILD/csg-1.6.1/src/tests/test_bead.cc:21: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Linking CXX executable unit_test_csg_topology cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_csg_topology.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -o unit_test_csg_topology -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 68%] Built target csg_stat /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_basebead.dir/build.make src/tests/CMakeFiles/unit_test_basebead.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_basebead.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_basebead.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_basebead.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_basebead.dir/depend.internal". Scanning dependencies of target unit_test_basebead gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_basebead.dir/build.make src/tests/CMakeFiles/unit_test_basebead.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 69%] Building CXX object src/tests/CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_basebead.cc [ 70%] Linking CXX executable unit_test_beadtriple cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadtriple.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -o unit_test_beadtriple -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so In file included from /usr/include/boost/config/header_deprecated.hpp:18, from /usr/include/boost/test/floating_point_comparison.hpp:13, from /builddir/build/BUILD/csg-1.6.1/src/tests/test_basebead.cc:21: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Linking CXX executable unit_test_lammpsdumpreaderwriter cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -o unit_test_lammpsdumpreaderwriter -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 71%] Built target unit_test_beadtriple /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_interaction.dir/build.make src/tests/CMakeFiles/unit_test_interaction.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_interaction.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_interaction.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_interaction.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_interaction.dir/depend.internal". Scanning dependencies of target unit_test_interaction gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_interaction.dir/build.make src/tests/CMakeFiles/unit_test_interaction.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 72%] Building CXX object src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_interaction.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 72%] Built target unit_test_csg_topology /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/depend.internal". Scanning dependencies of target unit_test_beadmotif_algorithms gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 73%] Building CXX object src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_beadmotif_algorithms.cc [ 74%] Linking CXX executable unit_test_bead cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bead.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_bead.dir/test_bead.cc.o -o unit_test_bead -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 74%] Built target unit_test_lammpsdumpreaderwriter /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/depend.internal". Scanning dependencies of target unit_test_beadmotif_connector gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 75%] Building CXX object src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_beadmotif_connector.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 75%] Built target unit_test_bead /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make src/tests/CMakeFiles/unit_test_beadmotif_base.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/depend.internal". Scanning dependencies of target unit_test_beadmotif_base gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 75%] Building CXX object src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_beadmotif_base.cc [ 76%] Linking CXX executable unit_test_basebead cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_basebead.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -o unit_test_basebead -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 76%] Built target unit_test_basebead /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/depend.internal". Scanning dependencies of target unit_test_beadstructure_algorithms gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 76%] Building CXX object src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_beadstructure_algorithms.cc [ 77%] Linking CXX executable unit_test_beadmotif_algorithms cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_algorithms.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -o unit_test_beadmotif_algorithms -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 78%] Linking CXX executable unit_test_beadmotif_connector cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_connector.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -o unit_test_beadmotif_connector -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 78%] Linking CXX executable unit_test_interaction cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_interaction.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -o unit_test_interaction -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 79%] Linking CXX executable unit_test_beadmotif_base cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_base.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -o unit_test_beadmotif_base -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 79%] Built target unit_test_beadmotif_connector /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make src/tests/CMakeFiles/unit_test_beadstructure_base.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/depend.internal". Scanning dependencies of target unit_test_beadstructure_base gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 80%] Building CXX object src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_beadstructure_base.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 80%] Built target unit_test_beadmotif_base /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_triplelist.dir/build.make src/tests/CMakeFiles/unit_test_triplelist.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_triplelist.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_triplelist.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_triplelist.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_triplelist.dir/depend.internal". Scanning dependencies of target unit_test_triplelist gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_triplelist.dir/build.make src/tests/CMakeFiles/unit_test_triplelist.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 81%] Building CXX object src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_triplelist.cc In file included from /usr/include/boost/config/header_deprecated.hpp:18, from /usr/include/boost/test/floating_point_comparison.hpp:13, from /builddir/build/BUILD/csg-1.6.1/src/tests/test_triplelist.cc:21: /usr/include/boost/test/floating_point_comparison.hpp:14:1: note: '#pragma message: This header is deprecated. Use instead.' 14 | BOOST_HEADER_DEPRECATED( "" ) | ^~~~~~~~~~~~~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 81%] Built target unit_test_beadmotif_algorithms /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend.internal". Scanning dependencies of target unit_test_bondedstatistics gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 82%] Building CXX object src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_bondedstatistics.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 82%] Built target unit_test_interaction /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/depend.internal". Scanning dependencies of target unit_test_lammpsdatareader gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 83%] Building CXX object src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_lammpsdatareader.cc [ 84%] Linking CXX executable unit_test_beadstructure_algorithms cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadstructure_algorithms.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -o unit_test_beadstructure_algorithms -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 84%] Built target unit_test_beadstructure_algorithms /usr/bin/gmake -f share/template/CMakeFiles/template_threaded.dir/build.make share/template/CMakeFiles/template_threaded.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/share/template /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/template_threaded.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/template_threaded.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/template_threaded.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/template_threaded.dir/depend.internal". Scanning dependencies of target template_threaded gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f share/template/CMakeFiles/template_threaded.dir/build.make share/template/CMakeFiles/template_threaded.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 85%] Building CXX object share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/template_threaded.dir/template_threaded.cc.o -c /builddir/build/BUILD/csg-1.6.1/share/template/template_threaded.cc [ 85%] Linking CXX executable unit_test_beadstructure_base cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadstructure_base.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -o unit_test_beadstructure_base -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 85%] Linking CXX executable unit_test_triplelist cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_triplelist.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -o unit_test_triplelist -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 85%] Linking CXX executable unit_test_bondedstatistics cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bondedstatistics.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -o unit_test_bondedstatistics -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../csg_boltzmann/libvotca_csg_boltzmann.a ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 85%] Built target unit_test_beadstructure_base /usr/bin/gmake -f share/template/CMakeFiles/template_serial.dir/build.make share/template/CMakeFiles/template_serial.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/share/template /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/template_serial.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/template_serial.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/template_serial.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/CMakeFiles/template_serial.dir/depend.internal". Scanning dependencies of target template_serial gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f share/template/CMakeFiles/template_serial.dir/build.make share/template/CMakeFiles/template_serial.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 86%] Building CXX object share/template/CMakeFiles/template_serial.dir/template_serial.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/template_serial.dir/template_serial.cc.o -c /builddir/build/BUILD/csg-1.6.1/share/template/template_serial.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 86%] Built target unit_test_triplelist /usr/bin/gmake -f src/tools/CMakeFiles/csg_density_manpage.dir/build.make src/tools/CMakeFiles/csg_density_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_density_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_density_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_density_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_density_manpage.dir/depend.internal". Scanning dependencies of target csg_density_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_density_manpage.dir/build.make src/tools/CMakeFiles/csg_density_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 87%] Generating csg_density.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_density --help > csg_density.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_density.help > csg_density.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_density.t2t -o csg_density.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 87%] Built target csg_density_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/depend.internal". Scanning dependencies of target csg_gmxtopol_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 88%] Generating csg_gmxtopol.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_gmxtopol --help > csg_gmxtopol.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_gmxtopol.help > csg_gmxtopol.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_gmxtopol.t2t -o csg_gmxtopol.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 88%] Built target csg_gmxtopol_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make src/tools/CMakeFiles/csg_dlptopol_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/depend.internal". Scanning dependencies of target csg_dlptopol_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 89%] Generating csg_dlptopol.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_dlptopol --help > csg_dlptopol.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_dlptopol.help > csg_dlptopol.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_dlptopol.t2t -o csg_dlptopol.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 89%] Built target csg_dlptopol_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_fmatch_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_fmatch_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend.internal". Scanning dependencies of target csg_fmatch_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make src/tools/CMakeFiles/csg_fmatch_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 90%] Generating csg_fmatch.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_fmatch --help > csg_fmatch.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_fmatch.help > csg_fmatch.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_fmatch.t2t -o csg_fmatch.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 90%] Built target csg_fmatch_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_property_manpage.dir/build.make src/tools/CMakeFiles/csg_property_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_property_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_property_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_property_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_property_manpage.dir/depend.internal". Scanning dependencies of target csg_property_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_property_manpage.dir/build.make src/tools/CMakeFiles/csg_property_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 90%] Generating csg_property.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_property --help > csg_property.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_property.help > csg_property.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_property.t2t -o csg_property.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 90%] Built target csg_property_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make src/tools/CMakeFiles/csg_reupdate_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_reupdate_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_reupdate_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_reupdate_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_reupdate_manpage.dir/depend.internal". Scanning dependencies of target csg_reupdate_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make src/tools/CMakeFiles/csg_reupdate_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 91%] Generating csg_reupdate.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_reupdate --help > csg_reupdate.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_reupdate.help > csg_reupdate.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_reupdate.t2t -o csg_reupdate.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 91%] Built target csg_reupdate_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_resample_manpage.dir/build.make src/tools/CMakeFiles/csg_resample_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_resample_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_resample_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_resample_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_resample_manpage.dir/depend.internal". Scanning dependencies of target csg_resample_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_resample_manpage.dir/build.make src/tools/CMakeFiles/csg_resample_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 92%] Generating csg_resample.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_resample --help > csg_resample.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_resample.help > csg_resample.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_resample.t2t -o csg_resample.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 92%] Built target csg_resample_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend.internal". Scanning dependencies of target csg_imc_solve_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 93%] Generating csg_imc_solve.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_imc_solve --help > csg_imc_solve.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_imc_solve.help > csg_imc_solve.t2t gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 93%] Built target unit_test_bondedstatistics /usr/bin/gmake -f src/tools/CMakeFiles/csg_map_manpage.dir/build.make src/tools/CMakeFiles/csg_map_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_map_manpage.dir/DependInfo.cmake --color= cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_imc_solve.t2t -o csg_imc_solve.man Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_map_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_map_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_map_manpage.dir/depend.internal". Scanning dependencies of target csg_map_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_map_manpage.dir/build.make src/tools/CMakeFiles/csg_map_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 93%] Generating csg_map.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_map --help > csg_map.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_map.help > csg_map.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_map.t2t -o csg_map.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 93%] Built target csg_imc_solve_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_dump_manpage.dir/build.make src/tools/CMakeFiles/csg_dump_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dump_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dump_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dump_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_dump_manpage.dir/depend.internal". Scanning dependencies of target csg_dump_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_dump_manpage.dir/build.make src/tools/CMakeFiles/csg_dump_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 93%] Generating csg_dump.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_dump --help > csg_dump.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_dump.help > csg_dump.t2t gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_dump.t2t -o csg_dump.man [ 93%] Built target csg_map_manpage /usr/bin/gmake -f src/tools/CMakeFiles/csg_stat_manpage.dir/build.make src/tools/CMakeFiles/csg_stat_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_stat_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_stat_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_stat_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/CMakeFiles/csg_stat_manpage.dir/depend.internal". Scanning dependencies of target csg_stat_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tools/CMakeFiles/csg_stat_manpage.dir/build.make src/tools/CMakeFiles/csg_stat_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 94%] Generating csg_stat.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && ./csg_stat --help > csg_stat.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/../../scripts/help2t2t csg_stat.help > csg_stat.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools && /usr/bin/txt2tags -q -t man -i csg_stat.t2t -o csg_stat.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 94%] Built target csg_dump_manpage /usr/bin/gmake -f src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/csg_boltzmann /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend.internal". Scanning dependencies of target csg_boltzmann gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 94%] Building CXX object src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/g++ -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/csg_boltzmann.dir/main.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/csg_boltzmann/main.cc gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 94%] Built target csg_stat_manpage /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/depend.internal". Scanning dependencies of target unit_test_tabulatedpotential gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 95%] Building CXX object src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/g++ -DBOOST_TEST_DYN_LINK -I/builddir/build/BUILD/csg-1.6.1/include -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -std=c++14 -o CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -c /builddir/build/BUILD/csg-1.6.1/src/tests/test_tabulatedpotential.cc [ 96%] Linking CXX executable unit_test_lammpsdatareader cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_lammpsdatareader.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -o unit_test_lammpsdatareader -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 96%] Linking CXX executable template_threaded cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template_threaded.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/template_threaded.dir/template_threaded.cc.o -o template_threaded -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../../src/libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 96%] Built target unit_test_lammpsdatareader gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 96%] Built target template_threaded [ 97%] Linking CXX executable template_serial cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template_serial.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/template_serial.dir/template_serial.cc.o -o template_serial -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../../src/libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 97%] Built target template_serial [ 98%] Linking CXX executable csg_boltzmann cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_boltzmann.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/csg_boltzmann.dir/main.cc.o -o csg_boltzmann -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg: libvotca_csg_boltzmann.a ../libcsg/libvotca_csg.so.6 /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so [ 99%] Linking CXX executable unit_test_tabulatedpotential cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_tabulatedpotential.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -o unit_test_tabulatedpotential -Wl,-rpath,/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/libcsg ../csg_boltzmann/libvotca_csg_boltzmann.a ../libcsg/libvotca_csg.so.6 /usr/lib64/libboost_unit_test_framework.so /usr/lib64/libvotca_tools.so.6 /usr/lib64/libboost_program_options.so gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [ 99%] Built target csg_boltzmann /usr/bin/gmake -f src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/src/csg_boltzmann /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend.internal". Scanning dependencies of target csg_boltzmann_manpage gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [100%] Generating csg_boltzmann.man cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && ./csg_boltzmann --help > csg_boltzmann.help cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/bash /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann/../../scripts/help2t2t csg_boltzmann.help > csg_boltzmann.t2t cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/csg_boltzmann && /usr/bin/txt2tags -q -t man -i csg_boltzmann.t2t -o csg_boltzmann.man gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [100%] Built target csg_boltzmann_manpage /usr/bin/gmake -f CMakeFiles/manpages.dir/build.make CMakeFiles/manpages.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' cd /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1 /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/CMakeFiles/manpages.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/CMakeFiles/manpages.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/CMakeFiles/manpages.dir/depend.internal". Dependee "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/CMakeFiles/manpages.dir/depend.internal". Scanning dependencies of target manpages gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/gmake -f CMakeFiles/manpages.dir/build.make CMakeFiles/manpages.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' gmake[2]: Nothing to be done for 'CMakeFiles/manpages.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [100%] Built target manpages gmake[2]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' [100%] Built target unit_test_tabulatedpotential gmake[1]: Leaving directory '/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.B10Wpf + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64 ++ dirname /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64 + cd csg-1.6.1 + DESTDIR=/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64 + /usr/bin/cmake --install aarch64-redhat-linux-gnu -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/lib64/libvotca_csg.so.6 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/lib64/libvotca_csg.so -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/lib64/cmake/VOTCA_CSG/VOTCA_CSG_Targets.cmake -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/lib64/cmake/VOTCA_CSG/VOTCA_CSG_Targets-release.cmake -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/lib64/cmake/VOTCA_CSG/VOTCA_CSGConfig.cmake -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/lib64/cmake/VOTCA_CSG/VOTCA_CSGConfigVersion.cmake -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_reupdate -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_reupdate" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_reupdate.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_map -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_map" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_map.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_dump -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_dump" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_dump.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_property -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_property" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_property.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_resample -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_resample" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_resample.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_stat -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_stat" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_stat.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_fmatch -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_fmatch" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_fmatch.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_gmxtopol -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_gmxtopol" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_gmxtopol.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_dlptopol -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_dlptopol" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_dlptopol.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_density -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_density" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_density.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_imc_solve -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_imc_solve" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_imc_solve.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_boltzmann -- Set runtime path of "/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_boltzmann" to "" -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_boltzmann.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_call -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_call.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_inverse -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man1/csg_inverse.1 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/rc/csg-completion.bash -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/basebead.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/bead.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadlist.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadmotif.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadmotifalgorithms.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadmotifconnector.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadpair.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadstructure.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadstructurealgorithms.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadtriple.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/beadtype.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/boundarycondition.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/cgengine.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/cgmoleculedef.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/cgobserver.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/csgapplication.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/exclusionlist.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/fileformatfactory.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/imcio.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/interaction.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/map.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/molecule.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/moleculeitem.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/nblist.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/nblist_3body.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/nblistgrid.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/nblistgrid_3body.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/nematicorder.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/openbox.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/orthorhombicbox.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/pairlist.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/pdbwriter.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/potentialfunction.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/potentialfunctioncbspl.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/potentialfunctionlj126.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/potentialfunctionljg.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/residue.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/topology.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/topologyitem.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/topologymap.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/topologyreader.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/trajectoryreader.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/trajectorywriter.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/triclinicbox.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/triplelist.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/version.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/xyzreader.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/include/votca/csg/xyzwriter.h -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/man/man7/votca-csg.7 -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/xml/mapping.xml -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/xml/topol.xml -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/xml/csg_defaults.xml -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/CsgFunctions.pm -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/CsgSimplex.pm -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/csg_table -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/add_POT.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/add_pot_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/calc_density_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/calc_kbint.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/calc_pressure_gromacs.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/calc_pressure_lammps.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/calc_rdf_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/calc_target_rdf_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/clean_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/cma_processor.py -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/convergence_check_default.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/dist_adjust.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/dist_boltzmann_invert.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/dummy.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/functions_common.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/functions_dlpoly.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/functions_genericsim.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/functions_gromacs.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/imc_stat_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/initialize_step_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/initialize_step_genericsim.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/initialize_step_optimizer.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/initialize_step_re.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/inverse.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/kbibi_ramp_correction.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/lj_126.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/merge_tables.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/optimizer_parameters_to_potential.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/optimizer_prepare_state.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/optimizer_state_to_mapping.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/optimizer_state_to_potentials.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/optimizer_target_density.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/optimizer_target_pressure.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/optimizer_target_rdf.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/post_add.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/post_add_single.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/post_update_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/post_update_generic_single.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/post_update_re_single.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_acc_convergence.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_average.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_compress.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_convergence.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_copyback.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_dummy.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_overwrite.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_plot.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postadd_shift.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postupd_addlj.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postupd_cibi_correction.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postupd_extrapolate.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postupd_kbibi_correction.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postupd_pressure.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postupd_scale.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postupd_smooth.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/postupd_splinesmooth.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/potential_extrapolate.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/potential_shift.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/potential_to_dlpoly.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/potential_to_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/potential_to_gromacs.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/potential_to_lammps.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/potentials_to_dlpoly.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/potentials_to_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/pre_update_re.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/prepare_generic.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/prepare_generic_single.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/prepare_imc.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/prepare_optimizer.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/prepare_optimizer_single.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/prepare_re.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/pressure_cor_simple.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/pressure_cor_wjk.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/resample_target.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/run_genericsim.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/run_gromacs.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/simplex_downhill_processor.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/skeleton.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/skeleton.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/start_framework.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_average.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_change_flag.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_combine.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_dummy.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_extrapolate.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_functional.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_get_value.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_integrate.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_linearop.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_scale.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_smooth.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_switch_border.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_to_tab.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/table_to_xvg.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/tables_jackknife.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/tag_file.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/update_ibi.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/update_ibi_pot.pl -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/update_ibi_single.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/update_imc.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/update_imc_single.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/update_optimizer.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/update_optimizer_single.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/scripts/inverse/update_re.sh -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/template/template_serial.cc -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/template/template_threaded.cc -- Installing: /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/template/CMakeLists.txt + mkdir -p /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/bash_completion + mv /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/votca/rc/csg-completion.bash /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/bash_completion/votca + mkdir -p /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/doc/votca-csg + cp /builddir/build/SOURCES/votca-csg-manual-1.6.1.pdf /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/doc/votca-csg + /usr/lib/rpm/find-debuginfo.sh -j5 --strict-build-id -m -i --build-id-seed 1.6.1-5.fc33 --unique-debug-suffix -1.6.1-5.fc33.aarch64 --unique-debug-src-base votca-csg-1.6.1-5.fc33.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/csg-1.6.1 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_density explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_dlptopol explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_boltzmann explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_dump explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_fmatch extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_fmatch extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_dlptopol extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_density extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_dump extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_boltzmann explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_gmxtopol extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_gmxtopol explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_imc_solve extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_imc_solve explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_map extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_map explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_property extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_property explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_resample extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_resample explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_reupdate extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_reupdate explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_stat extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/bin/csg_stat explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/lib64/libvotca_csg.so.6 extracting debug info from /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/lib64/libvotca_csg.so.6 original debug info size: 174472kB, size after compression: 129512kB /usr/lib/rpm/sepdebugcrcfix: Updated 13 CRC32s, 0 CRC32s did match. 1213 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/csg_call from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/bin/csg_inverse from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_plot.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/post_update_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/skeleton.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/tag_file.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/optimizer_parameters_to_potential.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_overwrite.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/potential_to_lammps.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/add_pot_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postupd_kbibi_correction.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/imc_stat_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/post_update_re_single.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_dummy.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/optimizer_state_to_potentials.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/post_add_single.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/prepare_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_acc_convergence.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/optimizer_state_to_mapping.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/prepare_imc.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/calc_rdf_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/calc_pressure_gromacs.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/update_ibi_single.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/prepare_optimizer.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/table_change_flag.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postupd_pressure.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postupd_extrapolate.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/initialize_step_optimizer.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/calc_pressure_lammps.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/resample_target.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_compress.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/initialize_step_genericsim.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/post_add.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/pre_update_re.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/prepare_generic_single.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/potential_to_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/calc_density_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/table_dummy.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/update_optimizer_single.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/clean_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/table_average.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postupd_splinesmooth.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_average.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/initialize_step_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_convergence.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/potential_extrapolate.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/potentials_to_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/dummy.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/optimizer_target_rdf.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/cma_processor.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/share/votca/scripts/inverse/potential_to_dlpoly.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/optimizer_prepare_state.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/optimizer_target_density.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postupd_scale.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/run_genericsim.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/update_re.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_shift.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/functions_gromacs.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/table_functional.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/initialize_step_re.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/convergence_check_default.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postupd_addlj.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/potentials_to_dlpoly.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/inverse.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/update_imc.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/prepare_re.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/post_update_generic_single.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/prepare_optimizer_single.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/run_gromacs.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/start_framework.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/calc_target_rdf_generic.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postupd_cibi_correction.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postupd_smooth.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/update_ibi.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/calc_kbint.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/functions_genericsim.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/functions_common.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/potential_to_gromacs.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/optimizer_target_pressure.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/update_imc_single.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/postadd_copyback.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/update_optimizer.sh from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/share/votca/scripts/inverse/functions_dlpoly.sh from /bin/bash to #!/usr/bin/bash Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.TP9BPd + umask 022 + cd /builddir/build/BUILD + cd csg-1.6.1 + cd aarch64-redhat-linux-gnu + /usr/bin/ctest --output-on-failure --force-new-ctest-process -j5 --verbose UpdateCTestConfiguration from :/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/DartConfiguration.tcl Test project /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 12 Start 12: integration_Run_csg_reupdate 12: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_reupdate "--gentable" "true" "--options" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/settings_re.xml" 12: Test timeout computed to be: 10000000 test 14 Start 14: integration_Run_csg_reupdate2 14: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_reupdate "--options" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/settings_re.xml" "--top" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/topol_cg.xml" "--trj" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame_cg.dump" "--hessian-check" "no" 14: Test timeout computed to be: 10000000 test 17 Start 17: integration_Run_csg_fmatch 17: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_fmatch "--top" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/topol.xml" "--trj" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump" "--options" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/settings_fmatch.xml" "--cg" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/mapping.xml" 17: Test timeout computed to be: 10000000 test 19 Start 19: integration_Run_csg_fmatch_3body 19: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_fmatch "--top" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/topol.xml" "--trj" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump" "--options" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/settings_fmatch_3body.xml" "--cg" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/mapping.xml" 19: Test timeout computed to be: 10000000 test 23 Start 23: integration_Run_csg_map 23: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_map "--top" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/topol.xml" "--trj" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump" "--out" "frame.dump" "--no-map" "--force" 23: Test timeout computed to be: 10000000 12: Writing CG parameters and potential(s) 12: Writing file: CG-CG.pot.new 12: CG-CG potential's extrapolated core is attractive! 12: Artifically enforcing repulsive core. 12: 1/84 Test #12: integration_Run_csg_reupdate ....................... Passed 0.02 sec test 25 Start 25: integration_Run_csg_map_gro 25: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_map "--top" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/topol.xml" "--trj" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump" "--cg" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/mapping.xml" "--out" "conf_cg.gro" "--nframes" "1" 25: Test timeout computed to be: 10000000 14: I have 216 beads in 216 molecules 14: Reading frame, timestep 0 14: We have CG-CG CG potential 14: Between beads CG-CG 14: With Function form cbspl 14: And 4 parameters to optimize 14: Potential range: 14: rmin = 0.26 [nm] 14: rcutoff = 0.3 [nm] 14: Total number of parameters to optimize: 4 17: I have 648 beads in 216 molecules 14: Updating parameters 14: ****************** WARNING ***************** 14: Hessian H NOT a positive definite! 14: This can be a result of poor initial guess or ill-suited CG potential settings or poor CG sampling. 14: ******************************************** 14: 14: However, you want to proceed despite non-positive definite H. 14: Non-positive H does not gurantee relative entropy iterations to converge to minimum. 14: You can turn on Hessian check by setting command line option --hessian-check=true. 14: In this case, alternative update option is steepest descent. 14: AA Ensemble Avg Energy :: 0.328298 14: CG Ensemble Avg Energy :: 5.32913 14: Writing CG parameters and potential(s) 14: Writing file: CG-CG.pot.new 14: CG-CG potential's extrapolated core is attractive! 14: Artifically enforcing repulsive core. 14: 14: Writing file: CG-CG.param.new 14: CG-CG potential's extrapolated core is attractive! 14: Artifically enforcing repulsive core. 14: 14: Finished RE update! 19: I have 648 beads in 216 molecules 23: I have 648 beads in 216 molecules 23: Reading frame, timestep 0 23: writing coarse-grained trajectory to frame.dump 17: I have 216 beads in 216 molecules for the coarsegraining 17: Reading frame, timestep 0 17: a: 0.37 ,sigma: 1 ,gamma: 0.12 17: Number of spline functions for the interaction CG-CG:13 17: 17: You are using VOTCA! 17: 17: hey, somebody wants to forcematch! 17: 17: Using constrained Least Squares! 17: 2/84 Test #14: integration_Run_csg_reupdate2 ...................... Passed 0.03 sec test 27 Start 27: integration_Run_csg_stat 27: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_stat "--top" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/topol.xml" "--trj" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump" "--options" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/settings_rdf.xml" "--cg" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/mapping.xml" 27: Test timeout computed to be: 10000000 19: I have 216 beads in 216 molecules for the coarsegraining 19: Reading frame, timestep 0 3/84 Test #23: integration_Run_csg_map ............................ Passed 0.03 sec test 30 Start 30: integration_Run_csg_stat_angular 30: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_stat "--top" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/topol.xml" "--trj" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump" "--options" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/settings_angular.xml" "--cg" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/mapping.xml" 30: Test timeout computed to be: 10000000 19: a: 0.37 ,sigma: 1 ,gamma: 0.12 19: Number of spline functions for the interaction CG-CG:48 19: a: 0.37 ,sigma: 1 ,gamma: 0.08 19: Number of spline functions for the interaction CG-CG-CG:36 19: 19: You are using VOTCA! 19: 19: hey, somebody wants to forcematch! 19: 19: Using constrained Least Squares! 19: 17: This should be a number: -19.5494 17: 17: Block No1 done! 17: Updating file: CG-CG.force 17: 17: We are done, thank you very much! 4/84 Test #17: integration_Run_csg_fmatch ......................... Passed 0.05 sec test 32 Start 32: integration_Run_csg_stat-imc 32: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_stat "--top" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/topol.xml" "--trj" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump" "--do-imc" "--options" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/settings_imc.xml" "--cg" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/mapping.xml" 32: Test timeout computed to be: 10000000 25: I have 648 beads in 216 molecules 27: begin to calculate distribution functions 27: # of bonded interactions: 0 27: # of non-bonded interactions: 1 27: I have 648 beads in 216 molecules 25: I have 216 beads in 216 molecules for the coarsegraining 25: Reading frame, timestep 0 27: I have 216 beads in 216 molecules for the coarsegraining 27: Reading frame, timestep 0 25: writing coarse-grained trajectory to conf_cg.gro 30: begin to calculate distribution functions 30: # of bonded interactions: 0 30: # of non-bonded interactions: 1 30: I have 648 beads in 216 molecules 30: I have 216 beads in 216 molecules for the coarsegraining 30: Reading frame, timestep 0 32: begin to calculate inverse monte carlo parameters 32: # of bonded interactions: 0 32: # of non-bonded interactions: 1 32: I have 648 beads in 216 molecules 5/84 Test #25: integration_Run_csg_map_gro ........................ Passed 0.06 sec test 37 Start 37: integration_Run_csg_imc_solve 37: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_imc_solve "-i" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/imc/CG-CG.imc" "-g" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/imc/CG-CG.gmc" "-n" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/imc/CG-CG.idx" 37: Test timeout computed to be: 10000000 32: I have 216 beads in 216 molecules for the coarsegraining 32: Reading frame, timestep 0 32: 32: written CG-CG.dist.new 32: written CG-CG.imc 32: written CG-CG.gmc 32: written CG-CG.idx 6/84 Test #32: integration_Run_csg_stat-imc ....................... Passed 0.05 sec test 39 Start 39: integration_Run_csg_imc_solve_reg 39: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_imc_solve "-r" "1000" "-i" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/group_1.imc" "-g" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/group_1.gmc" "-n" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/group_1.idx" 39: Test timeout computed to be: 10000000 27: 27: written CG-CG.dist.new 27: written CG-CG.force.new 7/84 Test #27: integration_Run_csg_stat ........................... Passed 0.07 sec test 43 Start 43: integration_Run_csg_resample_akima 43: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_resample "--in" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_in" "--out" "table_akima" "--type" "akima" "--grid" "0:0.1:3" 43: Test timeout computed to be: 10000000 8/84 Test #37: integration_Run_csg_imc_solve ...................... Passed 0.04 sec test 45 Start 45: integration_Run_csg_resample_cubic 45: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_resample "--in" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_in" "--out" "table_cubic" "--type" "cubic" "--grid" "0:0.1:3" 45: Test timeout computed to be: 10000000 9/84 Test #43: integration_Run_csg_resample_akima ................. Passed 0.02 sec test 47 Start 47: integration_Run_csg_resample_linear 47: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_resample "--in" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_in" "--out" "table_linear" "--type" "linear" "--grid" "0:0.1:3" 47: Test timeout computed to be: 10000000 10/84 Test #45: integration_Run_csg_resample_cubic ................. Passed 0.02 sec test 49 Start 49: integration_Run_csg_resample_cubicfit 49: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_resample "--in" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_in" "--out" "table_cubicfit" "--type" "cubic" "--grid" "0:1:9" "--fitgrid" "0:2:9" 49: Test timeout computed to be: 10000000 11/84 Test #47: integration_Run_csg_resample_linear ................ Passed 0.02 sec test 51 Start 51: integration_Run_csg_dump 51: Test command: /usr/bin/bash "-c" "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_dump --top /builddir/build/BUILD/csg-1.6.1/src/tools/references/methanol-water//topol_cg.xml > csg_dump.out" 51: Test timeout computed to be: 10000000 30: 30: written CG-CG-CG.dist.new 12/84 Test #30: integration_Run_csg_stat_angular ................... Passed 0.12 sec test 53 Start 53: integration_Run_csg_dump_gro 53: Test command: /usr/bin/bash "-c" "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_dump --top /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/3mols/conf.gro > csg_dump_gro.out" 53: Test timeout computed to be: 10000000 49: doing cubic fit 0:2:9 13/84 Test #39: integration_Run_csg_imc_solve_reg .................. Passed 0.06 sec test 55 Start 55: integration_Run_csg_dump_data 55: Test command: /usr/bin/bash "-c" "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_dump --top /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/3mols_cg/spce.data > csg_dump_data.out" 55: Test timeout computed to be: 10000000 14/84 Test #49: integration_Run_csg_resample_cubicfit .............. Passed 0.02 sec test 57 Start 57: integration_Run_csg_property 57: Test command: /usr/bin/bash "-c" "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_property --file /builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_property/csg_defaults.xml --print . --short --path cg.inverse.gromacs.DESC > csg_property.out" 57: Test timeout computed to be: 10000000 15/84 Test #53: integration_Run_csg_dump_gro ....................... Passed 0.02 sec test 59 Start 59: integration_Run_csg_property2 59: Test command: /usr/bin/bash "-c" "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_property --file /builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_property/csg_defaults.xml --print . --path cg.inverse.gromacs.DESC > csg_property.out2" 59: Test timeout computed to be: 10000000 16/84 Test #51: integration_Run_csg_dump ........................... Passed 0.03 sec test 61 Start 61: integration_Run_csg_property3 61: Test command: /usr/bin/bash "-c" "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_property --file /builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_property/test.xml --path A.B.C --print . > csg_property.out3" 61: Test timeout computed to be: 10000000 17/84 Test #57: integration_Run_csg_property ....................... Passed 0.02 sec test 63 Start 63: integration_Run_csg_property4 63: Test command: /usr/bin/bash "-c" "/builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_property --file /builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_property/test.xml --path A.B --print C > csg_property.out4" 63: Test timeout computed to be: 10000000 18/84 Test #55: integration_Run_csg_dump_data ...................... Passed 0.04 sec test 1 Start 1: integration_csg_reupdateHelp 1: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_reupdate "--help" 1: Test timeout computed to be: 10000000 19/84 Test #59: integration_Run_csg_property2 ...................... Passed 0.02 sec test 2 Start 2: integration_csg_mapHelp 2: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_map "--help" 2: Test timeout computed to be: 10000000 20/84 Test #63: integration_Run_csg_property4 ...................... Passed 0.02 sec test 3 Start 3: integration_csg_dumpHelp 3: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_dump "--help" 3: Test timeout computed to be: 10000000 21/84 Test #61: integration_Run_csg_property3 ...................... Passed 0.02 sec test 4 Start 4: integration_csg_propertyHelp 4: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_property "--help" 4: Test timeout computed to be: 10000000 1: ================================================== 1: ======== VOTCA (http://www.votca.org) ======== 1: ================================================== 1: 1: please submit bugs to bugs@votca.org 1: 1: csg_reupdate, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 1: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 1: gromacs, 2019.6 (double precision) 1: 1: computes relative entropy update. 1: 1: 1: Allowed options: 1: -h [ --help ] display this help and exit 1: --verbose be loud and noisy 1: --verbose1 be very loud and noisy 1: -v [ --verbose2 ] be extremly loud and noisy 1: --top arg atomistic topology file (only needed for 1: RE update) 1: 1: RE Specific options: 1: --options arg options file for coarse graining 1: --gentable arg (=0) only generate potential tables from given 1: parameters, NO RE update! 1: --interaction arg [OPTIONAL] generate potential tables only 1: for the specified interactions, 1: only valid when 'gentable' is true 1: --param-in-ext arg (=param.cur) Extension of the input parameter tables 1: --param-out-ext arg (=param.new) Extension of the output parameter tables 1: --pot-out-ext arg (=pot.new) Extension of the output potential tables 1: --hessian-check arg (=1) Disable the hessian check (mostly for 1: testing) 1: 1: Threading options: 1: --nt arg (=1) number of threads 1: 1: Trajectory options: 1: --trj arg atomistic trajectory file 1: --begin arg (=0) skip frames before this time (only works 1: for Gromacs files) 1: --first-frame arg (=0) start with this frame 1: --nframes arg process the given number of frames 1: 22/84 Test #1: integration_csg_reupdateHelp ....................... Passed 0.02 sec test 5 Start 5: integration_csg_resampleHelp 5: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_resample "--help" 5: Test timeout computed to be: 10000000 2: ================================================== 2: ======== VOTCA (http://www.votca.org) ======== 2: ================================================== 2: 2: please submit bugs to bugs@votca.org 2: 2: csg_map, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 2: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 2: gromacs, 2019.6 (double precision) 2: 2: Convert a reference atomistic trajectory or configuration into a coarse-grained one 2: based on a mapping xml-file. The mapping can be applied to either an entire trajectory 2: or a selected set of frames only (see options). 2: Examples: 2: * csg_map --top FA-topol.tpr --trj FA-traj.trr --out CG-traj.xtc --cg cg-map.xml 2: * csg_map --top FA-topol.tpr --trj FA-conf.gro --out CG-conf.gro --cg cg-map.xml 2: * csg_map --top FA-topol.tpr --trj FA-traj.xtc --out FA-history.dlph --no-map 2: * csg_map --top FA-field.dlpf --trj FA-history.dlph --out CG-history.dlph --cg cg-map.xml 2: * csg_map --top .dlpf --trj .dlph --out .dlph --cg cg-map.xml convert HISTORY to HISTORY_CGV 2: 2: 2: 2: Allowed options: 2: -h [ --help ] display this help and exit 2: --verbose be loud and noisy 2: --verbose1 be very loud and noisy 2: -v [ --verbose2 ] be extremly loud and noisy 2: --top arg atomistic topology file 2: --out arg output file for coarse-grained trajectory 2: --vel Write mapped velocities (if available) 2: --force Write mapped forces (if available) 2: --hybrid Create hybrid trajectory containing both atomistic 2: and coarse-grained 2: 2: Mapping options: 2: --cg arg coarse graining mapping and bond definitions 2: (xml-file) 2: --map-ignore arg list of molecules to ignore separated by ; 2: --no-map disable mapping and act on original trajectory 2: 2: Trajectory options: 2: --trj arg atomistic trajectory file 2: --begin arg (=0) skip frames before this time (only works for 2: Gromacs files) 2: --first-frame arg (=0) start with this frame 2: --nframes arg process the given number of frames 2: 23/84 Test #2: integration_csg_mapHelp ............................ Passed 0.02 sec test 6 Start 6: integration_csg_statHelp 6: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_stat "--help" 6: Test timeout computed to be: 10000000 3: ================================================== 3: ======== VOTCA (http://www.votca.org) ======== 3: ================================================== 3: 3: please submit bugs to bugs@votca.org 3: 3: csg_dump, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 3: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 3: gromacs, 2019.6 (double precision) 3: 3: Print atoms that are read from topology file to help debugging atom naming. 3: 3: 3: Allowed options: 3: -h [ --help ] display this help and exit 3: --verbose be loud and noisy 3: --verbose1 be very loud and noisy 3: -v [ --verbose2 ] be extremly loud and noisy 3: --top arg atomistic topology file 3: 3: Mapping options: 3: --cg arg [OPTIONAL] coarse graining mapping and bond 3: definitions 3: (xml-file). If no file is given, program acts on 3: original trajectory 3: --map-ignore arg list of molecules to ignore if mapping is done 3: separated by ; 3: 3: Specific options: 3: --excl display exclusion list instead of molecule list 3: 4: ================================================== 4: ======== VOTCA (http://www.votca.org) ======== 4: ================================================== 4: 4: please submit bugs to bugs@votca.org 4: 4: csg_property, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 4: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 4: gromacs, 2019.6 (double precision) 4: 4: Helper program called by inverse scripts to parse xml file. 4: 4: Allowed options: 4: --help produce this help message 4: --path arg path to part of the xml file to print 4: --filter arg list option values that match given criteria 4: --print arg (=.) specifies which children or root to print 4: --file arg xml file to parse 4: --short short version of output 4: --with-path include path of node in output 4: 5: ================================================== 5: ======== VOTCA (http://www.votca.org) ======== 5: ================================================== 5: 5: please submit bugs to bugs@votca.org 5: 5: csg_resample, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 5: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 5: gromacs, 2019.6 (double precision) 5: 5: Change grid and interval of any sort of table files. 5: Mainly called internally by inverse script, can also be 5: used to manually prepare input files for coarse-grained 5: simulations. 5: 5: Allowed options: 5: --help produce this help message 5: --in arg table to read 5: --out arg table to write 5: --derivative arg table to write 5: --grid arg new grid spacing (min:step:max). If 'grid' is specified 5: only, interpolation is performed. 5: --type arg (=akima) [cubic|akima|linear]. If option is not specified, the 5: default type 'akima' is assumed. 5: --fitgrid arg specify fit grid (min:step:max). If 'grid' and 5: 'fitgrid' are specified, a fit is performed. 5: --nocut Option for fitgrid: Normally, values out of fitgrid 5: boundaries are cut off. If they shouldn't, choose 5: --nocut. 5: --comment arg store a comment in the output table 5: --boundaries arg (natural|periodic|derivativezero) sets boundary 5: conditions 5: 24/84 Test #3: integration_csg_dumpHelp ........................... Passed 0.03 sec test 7 Start 7: integration_csg_fmatchHelp 7: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_fmatch "--help" 7: Test timeout computed to be: 10000000 25/84 Test #4: integration_csg_propertyHelp ....................... Passed 0.03 sec test 8 Start 8: integration_csg_gmxtopolHelp 8: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_gmxtopol "--help" 8: Test timeout computed to be: 10000000 26/84 Test #5: integration_csg_resampleHelp ....................... Passed 0.02 sec test 9 Start 9: integration_csg_dlptopolHelp 9: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_dlptopol "--help" 9: Test timeout computed to be: 10000000 7: ================================================== 7: ======== VOTCA (http://www.votca.org) ======== 7: ================================================== 7: 7: please submit bugs to bugs@votca.org 7: 7: csg_fmatch, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 7: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 7: gromacs, 2019.6 (double precision) 7: 7: Perform force matching (also called multiscale coarse-graining) 7: 7: 7: Allowed options: 7: -h [ --help ] display this help and exit 7: --verbose be loud and noisy 7: --verbose1 be very loud and noisy 7: -v [ --verbose2 ] be extremly loud and noisy 7: --top arg atomistic topology file 7: --options arg options file for coarse graining 7: --trj-force arg coarse-grained trajectory containing forces of 7: already known interactions 7: 7: Mapping options: 7: --cg arg coarse graining mapping and bond definitions 7: (xml-file) 7: --map-ignore arg list of molecules to ignore separated by ; 7: --no-map disable mapping and act on original trajectory 7: 7: Trajectory options: 7: --trj arg atomistic trajectory file 7: --begin arg (=0) skip frames before this time (only works for 7: Gromacs files) 7: --first-frame arg (=0) start with this frame 7: --nframes arg process the given number of frames 7: 27/84 Test #7: integration_csg_fmatchHelp ......................... Passed 0.02 sec test 10 Start 10: integration_csg_densityHelp 10: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_density "--help" 10: Test timeout computed to be: 10000000 6: ================================================== 6: ======== VOTCA (http://www.votca.org) ======== 6: ================================================== 6: 6: please submit bugs to bugs@votca.org 6: 6: csg_stat, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 6: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 6: gromacs, 2019.6 (double precision) 6: 6: Calculate all distributions (bonded and non-bonded) specified in options file. 6: Optionally calculates update Eigen::Matrix3d for invere Monte Carlo. This program 6: is called inside the inverse scripts. Unlike csg_boltzmann, big systems 6: can be treated as well as non-bonded interactions can be evaluated. 6: 6: 6: Allowed options: 6: -h [ --help ] display this help and exit 6: --verbose be loud and noisy 6: --verbose1 be very loud and noisy 6: -v [ --verbose2 ] be extremly loud and noisy 6: --top arg atomistic topology file 6: 6: Mapping options: 6: --cg arg [OPTIONAL] coarse graining mapping and bond 6: definitions 6: (xml-file). If no file is given, program acts on 6: original trajectory 6: --map-ignore arg list of molecules to ignore if mapping is done 6: separated by ; 6: 6: Specific options: 6: --options arg options file for coarse graining 6: --do-imc write out additional Inverse Monte Carlo data 6: --block-length arg write blocks of this length, the averages are 6: cleared after every write 6: --ext arg (=dist.new) Extension of the output 6: 6: Threading options: 6: --nt arg (=1) number of threads 6: 6: Trajectory options: 6: --trj arg atomistic trajectory file 6: --begin arg (=0) skip frames before this time (only works for 6: Gromacs files) 6: --first-frame arg (=0) start with this frame 6: --nframes arg process the given number of frames 6: 28/84 Test #6: integration_csg_statHelp ........................... Passed 0.04 sec test 11 Start 11: integration_csg_imc_solveHelp 11: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tools/csg_imc_solve "--help" 11: Test timeout computed to be: 10000000 8: ================================================== 8: ======== VOTCA (http://www.votca.org) ======== 8: ================================================== 8: 8: please submit bugs to bugs@votca.org 8: 8: csg_gmxtopol, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 8: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 8: gromacs, 2019.6 (double precision) 8: 8: Create skeleton for gromacs topology based on atomistic topology 8: and a mapping file. File still needs to be modified by the user. 8: 8: 8: Allowed options: 8: -h [ --help ] display this help and exit 8: --verbose be loud and noisy 8: --verbose1 be very loud and noisy 8: -v [ --verbose2 ] be extremly loud and noisy 8: --top arg atomistic topology file 8: --out arg output topology (will create .top and in future also 8: .itp) 8: 8: Mapping options: 8: --cg arg coarse graining mapping and bond definitions 8: (xml-file) 8: --map-ignore arg list of molecules to ignore separated by ; 8: --no-map disable mapping and act on original trajectory 8: 29/84 Test #8: integration_csg_gmxtopolHelp ....................... Passed 0.02 sec test 13 Start 13: integration_Compare_csg_reupdate_output 13: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.pot.new" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.pot.re" 13: Test timeout computed to be: 10000000 10: ================================================== 10: ======== VOTCA (http://www.votca.org) ======== 10: ================================================== 10: 10: please submit bugs to bugs@votca.org 10: 10: csg_density, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 10: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 10: gromacs, 2019.6 (double precision) 10: 10: Calculates the mass density distribution along a box axis or radial density profile from reference point 10: 10: 10: Allowed options: 10: -h [ --help ] display this help and exit 10: --verbose be loud and noisy 10: --verbose1 be very loud and noisy 10: -v [ --verbose2 ] be extremly loud and noisy 10: --top arg atomistic topology file 10: 10: Mapping options: 10: --cg arg [OPTIONAL] coarse graining mapping and bond 10: definitions 10: (xml-file). If no file is given, program acts on 10: original trajectory 10: --map-ignore arg list of molecules to ignore if mapping is done 10: separated by ; 10: 10: Specific options:: 10: --type arg (=mass) density type: mass or number 10: --axis arg (=r) [x|y|z|r] density axis (r=spherical) 10: --step arg (=0.01) spacing of density 10: --block-length arg write blocks of this length, the averages are 10: cleared after every write 10: --out arg Output file 10: --rmax arg rmax (default for [r] =min of all box vectors/2, else 10: l ) 10: --scale arg (=1) scale factor for the density 10: --molname arg (=*) molname 10: --filter arg (=*) filter bead names 10: --ref arg reference zero point 10: 10: Trajectory options: 10: --trj arg atomistic trajectory file 10: --begin arg (=0) skip frames before this time (only works for 10: Gromacs files) 10: --first-frame arg (=0) start with this frame 10: --nframes arg process the given number of frames 10: 30/84 Test #10: integration_csg_densityHelp ........................ Passed 0.02 sec test 15 Start 15: integration_Compare_csg_reupdate_output2 15: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.pot.new" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.pot.new.re" 15: Test timeout computed to be: 10000000 9: ================================================== 9: ======== VOTCA (http://www.votca.org) ======== 9: ================================================== 9: 9: please submit bugs to bugs@votca.org 9: 9: csg_dlptopol, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 9: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 9: gromacs, 2019.6 (double precision) 9: 9: Create a dlpoly topology template based on an existing (atomistic) topology and 9: a mapping xml-file. The created template file needs to be inspected and amended by the user! 9: 9: Examples: 9: * csg_dlptopol --top .dlpf --out .dlpf --cg cg-map.xml 9: convert FIELD to FIELD_CGV using cg-map.xml 9: * csg_dlptopol --top FA-dlpoly.dlpf --out CG-dlpoly.dlpf --cg cg-map.xml 9: * csg_dlptopol --top FA-gromacs.tpr --out FA-dlpoly.dlpf --no-map 9: 9: 9: 9: Allowed options: 9: -h [ --help ] display this help and exit 9: --verbose be loud and noisy 9: --verbose1 be very loud and noisy 9: -v [ --verbose2 ] be extremly loud and noisy 9: --top arg atomistic topology file 9: --out arg output topology in dlpoly format 9: 9: Mapping options: 9: --cg arg coarse graining mapping and bond definitions 9: (xml-file) 9: --map-ignore arg list of molecules to ignore separated by ; 9: --no-map disable mapping and act on original trajectory 9: 11: ================================================== 11: ======== VOTCA (http://www.votca.org) ======== 11: ================================================== 11: 11: please submit bugs to bugs@votca.org 11: 11: csg_imc_solve, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 11: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 11: gromacs, 2019.6 (double precision) 11: 11: Solves the linear system for IMCs 11: 11: 11: Allowed options: 11: -h [ --help ] display this help and exit 11: --verbose be loud and noisy 11: --verbose1 be very loud and noisy 11: -v [ --verbose2 ] be extremly loud and noisy 11: -r [ --regularization ] arg (=0) regularization factor 11: -i [ --imcfile ] arg imc statefile 11: -g [ --gmcfile ] arg gmc statefile 11: -n [ --idxfile ] arg idx statefile 11: 31/84 Test #11: integration_csg_imc_solveHelp ...................... Passed 0.02 sec test 16 Start 16: integration_Compare_csg_reupdate_output3 16: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.param.new" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.param.re" 16: Test timeout computed to be: 10000000 32/84 Test #9: integration_csg_dlptopolHelp ....................... Passed 0.05 sec test 18 Start 18: integration_Compare_csg_fmatch_output 18: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.force" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.force.fmatch" 18: Test timeout computed to be: 10000000 13: Comparing CG-CG.pot.new and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.pot.re to a tolerance of 3e-05 33/84 Test #13: integration_Compare_csg_reupdate_output ............ Passed 0.07 sec test 24 Start 24: integration_Compare_csg_map_output 24: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "frame.dump" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump" 24: Test timeout computed to be: 10000000 15: Comparing CG-CG.pot.new and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.pot.new.re to a tolerance of 3e-05 34/84 Test #15: integration_Compare_csg_reupdate_output2 ........... Passed 0.06 sec test 26 Start 26: integration_Compare_csg_map_gro_output 26: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "conf_cg.gro" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/conf_cg.gro" 26: Test timeout computed to be: 10000000 18: Comparing CG-CG.force and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.force.fmatch to a tolerance of 3e-05 16: Comparing CG-CG.param.new and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.param.re to a tolerance of 3e-05 35/84 Test #18: integration_Compare_csg_fmatch_output .............. Passed 0.07 sec test 28 Start 28: integration_Compare_csg_stat_output1 28: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.dist.new" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.rdf" 28: Test timeout computed to be: 10000000 36/84 Test #16: integration_Compare_csg_reupdate_output3 ........... Passed 0.09 sec test 29 Start 29: integration_Compare_csg_stat_output2 29: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.force.new" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.pmf" 29: Test timeout computed to be: 10000000 26: Comparing conf_cg.gro and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/conf_cg.gro to a tolerance of 3e-05 24: Comparing frame.dump and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/frame.dump to a tolerance of 3e-05 37/84 Test #26: integration_Compare_csg_map_gro_output ............. Passed 0.07 sec test 31 Start 31: integration_Compare_csg_stat_angular_output 31: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG-CG.dist.new" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG-CG.angular" 31: Test timeout computed to be: 10000000 38/84 Test #24: integration_Compare_csg_map_output ................. Passed 0.08 sec test 33 Start 33: integration_Compare_csg_stat-imc_output 33: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.imc" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.imc" 33: Test timeout computed to be: 10000000 28: Comparing CG-CG.dist.new and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.rdf to a tolerance of 3e-05 39/84 Test #28: integration_Compare_csg_stat_output1 ............... Passed 0.07 sec test 34 Start 34: integration_Compare_csg_stat-imc_output_2 34: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.dist.new" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.dist.imc" 34: Test timeout computed to be: 10000000 29: Comparing CG-CG.force.new and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.pmf to a tolerance of 3e-05 40/84 Test #29: integration_Compare_csg_stat_output2 ............... Passed 0.08 sec test 35 Start 35: integration_Compare_csg_stat-imc_output_3 35: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.gmc" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.gmc" 35: Test timeout computed to be: 10000000 33: Comparing CG-CG.imc and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.imc to a tolerance of 3e-05 41/84 Test #33: integration_Compare_csg_stat-imc_output ............ Passed 0.06 sec test 36 Start 36: integration_Compare_csg_stat-imc_output_4 36: Test command: /usr/bin/cmake "-E" "compare_files" "CG-CG.idx" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.idx" 36: Test timeout computed to be: 10000000 31: Comparing CG-CG-CG.dist.new and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG-CG.angular to a tolerance of 3e-05 34: Comparing CG-CG.dist.new and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.dist.imc to a tolerance of 3e-05 42/84 Test #31: integration_Compare_csg_stat_angular_output ........ Passed 0.09 sec test 38 Start 38: integration_Compare_csg_imc_solve_output 38: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.dpot.imc" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/imc/CG-CG.dpot.imc" 38: Test timeout computed to be: 10000000 43/84 Test #36: integration_Compare_csg_stat-imc_output_4 .......... Passed 0.02 sec test 40 Start 40: integration_Compare_csg_imc_solve_reg_output_2 40: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "LJ1-LJ1.dpot.imc" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/LJ1-LJ1.dpot.imc" 40: Test timeout computed to be: 10000000 44/84 Test #34: integration_Compare_csg_stat-imc_output_2 .......... Passed 0.07 sec test 41 Start 41: integration_Compare_csg_imc_solve_reg_output_3 41: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "LJ1-LJ2.dpot.imc" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/LJ1-LJ2.dpot.imc" 41: Test timeout computed to be: 10000000 35: Comparing CG-CG.gmc and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.gmc to a tolerance of 3e-05 45/84 Test #35: integration_Compare_csg_stat-imc_output_3 .......... Passed 0.07 sec test 42 Start 42: integration_Compare_csg_imc_solve_reg_output_4 42: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "LJ2-LJ2.dpot.imc" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/LJ2-LJ2.dpot.imc" 42: Test timeout computed to be: 10000000 38: Comparing CG-CG.dpot.imc and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/imc/CG-CG.dpot.imc to a tolerance of 3e-05 46/84 Test #38: integration_Compare_csg_imc_solve_output ........... Passed 0.07 sec test 44 Start 44: integration_Compare_csg_resample_akima_output 44: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "table_akima" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_akima" 44: Test timeout computed to be: 10000000 40: Comparing LJ1-LJ1.dpot.imc and /builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/LJ1-LJ1.dpot.imc to a tolerance of 3e-05 42: Comparing LJ2-LJ2.dpot.imc and /builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/LJ2-LJ2.dpot.imc to a tolerance of 3e-05 41: Comparing LJ1-LJ2.dpot.imc and /builddir/build/BUILD/csg-1.6.1/src/tools/references/LJ1-LJ2/LJ1-LJ2.dpot.imc to a tolerance of 3e-05 47/84 Test #40: integration_Compare_csg_imc_solve_reg_output_2 ..... Passed 0.08 sec test 46 Start 46: integration_Compare_csg_resample_cubic_output 46: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "table_cubic" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_cubic" 46: Test timeout computed to be: 10000000 48/84 Test #42: integration_Compare_csg_imc_solve_reg_output_4 ..... Passed 0.07 sec test 48 Start 48: integration_Compare_csg_resample_linear_output 48: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "table_linear" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_linear" 48: Test timeout computed to be: 10000000 49/84 Test #41: integration_Compare_csg_imc_solve_reg_output_3 ..... Passed 0.09 sec test 50 Start 50: integration_Compare_csg_resample_cubicfit_output 50: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "table_cubicfit" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_cubicfit" 50: Test timeout computed to be: 10000000 44: Comparing table_akima and /builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_akima to a tolerance of 3e-05 50/84 Test #44: integration_Compare_csg_resample_akima_output ...... Passed 0.07 sec test 52 Start 52: integration_Compare_csg_dump_output 52: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump.out" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/methanol-water//csg_dump.out" 52: Test timeout computed to be: 10000000 46: Comparing table_cubic and /builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_cubic to a tolerance of 3e-05 51/84 Test #46: integration_Compare_csg_resample_cubic_output ...... Passed 0.06 sec test 54 Start 54: integration_Compare_csg_dump_gro_output 54: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_gro.out" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/3mols/csg_dump_gro.out" 54: Test timeout computed to be: 10000000 48: Comparing table_linear and /builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_linear to a tolerance of 3e-05 52/84 Test #52: integration_Compare_csg_dump_output ................ Passed 0.02 sec test 56 Start 56: integration_Compare_csg_dump_data_output 56: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_data.out" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/3mols_cg/csg_dump_data.out" 56: Test timeout computed to be: 10000000 53/84 Test #48: integration_Compare_csg_resample_linear_output ..... Passed 0.07 sec test 58 Start 58: integration_Compare_csg_property_output 58: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_property/csg_property.out" 58: Test timeout computed to be: 10000000 50: Comparing table_cubicfit and /builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_resample/table_cubicfit to a tolerance of 3e-05 54/84 Test #56: integration_Compare_csg_dump_data_output ........... Passed 0.01 sec test 60 Start 60: integration_Compare_csg_property_output2 60: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_property/csg_property.out2" 60: Test timeout computed to be: 10000000 55/84 Test #54: integration_Compare_csg_dump_gro_output ............ Passed 0.03 sec test 62 Start 62: integration_Compare_csg_property_output3 62: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out3" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_property/csg_property.out3" 62: Test timeout computed to be: 10000000 56/84 Test #50: integration_Compare_csg_resample_cubicfit_output ... Passed 0.08 sec test 64 Start 64: integration_Compare_csg_property_output4 64: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out4" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/csg_property/csg_property.out4" 64: Test timeout computed to be: 10000000 57/84 Test #58: integration_Compare_csg_property_output ............ Passed 0.02 sec test 65 Start 65: unit_test_bead 65: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_bead 65: Test timeout computed to be: 10000000 58/84 Test #60: integration_Compare_csg_property_output2 ........... Passed 0.01 sec test 66 Start 66: unit_test_beadtriple 66: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_beadtriple 66: Test timeout computed to be: 10000000 59/84 Test #62: integration_Compare_csg_property_output3 ........... Passed 0.01 sec test 67 Start 67: unit_test_basebead 67: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_basebead 67: Test timeout computed to be: 10000000 60/84 Test #64: integration_Compare_csg_property_output4 ........... Passed 0.01 sec test 68 Start 68: unit_test_beadmotif_algorithms 68: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_beadmotif_algorithms 68: Test timeout computed to be: 10000000 65: Running 3 test cases... 65: 65: *** No errors detected 65:  61/84 Test #65: unit_test_bead ..................................... Passed 0.02 sec test 69 Start 69: unit_test_beadmotif_base 69: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_beadmotif_base 69: Test timeout computed to be: 10000000 66: Running 1 test case... 66: 66: *** No errors detected 66:  62/84 Test #66: unit_test_beadtriple ............................... Passed 0.02 sec test 70 Start 70: unit_test_beadmotif_connector 70: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_beadmotif_connector 70: Test timeout computed to be: 10000000 67: Running 2 test cases... 67: 67: *** No errors detected 67:  63/84 Test #67: unit_test_basebead ................................. Passed 0.03 sec test 71 Start 71: unit_test_beadstructure_base 71: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_beadstructure_base 71: Test timeout computed to be: 10000000 68: Running 4 test cases... 68: 68: *** No errors detected 68:  64/84 Test #68: unit_test_beadmotif_algorithms ..................... Passed 0.03 sec test 72 Start 72: unit_test_beadstructure_algorithms 72: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_beadstructure_algorithms 72: Test timeout computed to be: 10000000 69: Running 4 test cases... 71: Running 8 test cases... 71: 71: *** No errors detected 71:  69: 69: *** No errors detected 65/84 Test #71: unit_test_beadstructure_base ....................... Passed 0.01 sec test 73 Start 73: unit_test_bondedstatistics 73: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_bondedstatistics 73: Test timeout computed to be: 10000000 69:  66/84 Test #69: unit_test_beadmotif_base ........................... Passed 0.02 sec test 74 Start 74: unit_test_csg_topology 74: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_csg_topology 74: Test timeout computed to be: 10000000 70: Running 3 test cases... 70: 70: *** No errors detected 70:  67/84 Test #70: unit_test_beadmotif_connector ...................... Passed 0.02 sec test 75 Start 75: unit_test_interaction 75: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_interaction 75: Test timeout computed to be: 10000000 72: Running 1 test case... 72: Calling break into structures 72: Bead Count 1 3 72: Bead Count 2 5 73: Running 3 test cases... 73: 73: *** No errors detected 72: 72: *** No errors detected 73:  68/84 Test #73: unit_test_bondedstatistics ......................... Passed 0.02 sec test 76 Start 76: unit_test_lammpsdatareader 76: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_lammpsdatareader 76: Test timeout computed to be: 10000000 72:  69/84 Test #72: unit_test_beadstructure_algorithms ................. Passed 0.03 sec test 77 Start 77: unit_test_lammpsdumpreaderwriter 77: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_lammpsdumpreaderwriter 77: Test timeout computed to be: 10000000 74: Running 6 test cases... 74: interaction name :bond 74: interaction name :bond 74: 74: *** No errors detected 74:  70/84 Test #74: unit_test_csg_topology ............................. Passed 0.02 sec test 78 Start 78: unit_test_nblist_3body 78: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_nblist_3body 78: Test timeout computed to be: 10000000 75: Running 5 test cases... 75: molecule 1:large 1:index 1 75: molecule 1:medium 1:index 1 75: molecule 1:small 1:index 1 75: 75: *** No errors detected 75:  71/84 Test #75: unit_test_interaction .............................. Passed 0.02 sec test 79 Start 79: unit_test_nblistgrid_3body 79: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_nblistgrid_3body 79: Test timeout computed to be: 10000000 76: Running 2 test cases... 76: 76: WARNING: The votca lammps data reader is only able to read lammps files formatted in the following styles: 76: angle 76: atom 76: bond 76: full 76: molecule 76: 76: These styles use the following formats in the atom block: 76: atom-ID molecule-ID atom-type charge x y z 76: atom-ID molecule-ID atom-type charge x y z nx ny nz 76: atom-ID molecule-ID atom-type x y z 76: atom-ID molecule-ID atom-type x y z nx ny nz 76: atom-ID atom-type x y z 76: atom-ID atom-type x y z nx ny nz 76: 77: Running 2 test cases... 77: Reading frame, timestep 1 77: Reading frame, timestep 1 77: 77: *** No errors detected 76: 76: WARNING: The votca lammps data reader is only able to read lammps files formatted in the following styles: 76: angle 76: atom 76: bond 76: full 76: molecule 76: 76: These styles use the following formats in the atom block: 76: atom-ID molecule-ID atom-type charge x y z 76: atom-ID molecule-ID atom-type charge x y z nx ny nz 76: atom-ID molecule-ID atom-type x y z 76: atom-ID molecule-ID atom-type x y z nx ny nz 76: atom-ID atom-type x y z 78: Running 2 test cases... 78: 78: *** No errors detected 76: atom-ID atom-type x y z nx ny nz 76: 77:  72/84 Test #77: unit_test_lammpsdumpreaderwriter ................... Passed 0.03 sec test 80 Start 80: unit_test_pdbreader 80: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_pdbreader 80: Test timeout computed to be: 10000000 78:  73/84 Test #78: unit_test_nblist_3body ............................. Passed 0.02 sec test 81 Start 81: unit_test_tabulatedpotential 81: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_tabulatedpotential 81: Test timeout computed to be: 10000000 79: Running 2 test cases... 79: 79: *** No errors detected 79:  74/84 Test #79: unit_test_nblistgrid_3body ......................... Passed 0.03 sec test 82 Start 82: unit_test_triplelist 82: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/src/tests/unit_test_triplelist 82: Test timeout computed to be: 10000000 76: 65.7991 76: 51.0423 76: 58.4802 76: 65.7991 76: 51.0424 76: 58.4802 76: 108.431 76: 83.947 76: 68.5254 76: 108.431 76: 83.947 76: 68.5254 76: 76: *** No errors detected 76:  80: Running 1 test case... 80: The VOTCA pdb reader attempts to follow the official format: 80: http://www.wwpdb.org/documentation/file-format 80: 80: NOTE the element symbol is important for associating a mass with 80: each atom, if no element symbol is specified the atom name will be 80: used and assumed to be an element symbol. 80: The pdb file format does not support pseudo atoms such as a CH3 80: and thus VOTCA cannot read such atoms in when using a .pdb file. 80: If you need to use pseudo atoms consider using a different file 80: format such as the lammps data format. 80: WARNING no charge was specified for 80: HETATM 1 C UNL 1 -5.249 1.055 -0.000 1.00 0.00 C 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 2 H UNL 1 -6.202 1.521 -0.141 1.00 0.00 H 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 3 H UNL 1 -5.390 0.026 0.255 1.00 0.00 H 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 4 H UNL 1 -4.682 1.124 -0.904 1.00 0.00 H 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 5 H UNL 1 -4.724 1.550 0.790 1.00 0.00 H 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 6 C UNL 2 -2.248 1.671 -0.000 1.00 0.00 C 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 7 H UNL 2 -1.518 2.451 0.051 1.00 0.00 H 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 8 H UNL 2 -3.153 1.999 0.467 1.00 0.00 H 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 9 H UNL 2 -2.442 1.430 -1.024 1.00 0.00 H 80: Assuming a charge of 0 80: WARNING no charge was specified for 80: HETATM 10 H UNL 2 -1.880 0.804 0.507 1.00 0.00 H 80: Assuming a charge of 0 80: 80: *** No errors detected 75/84 Test #76: unit_test_lammpsdatareader ......................... Passed 0.05 sec test 83 Start 83: template_serialHelp 83: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/template_serial "--help" 83: Test timeout computed to be: 10000000 80:  76/84 Test #80: unit_test_pdbreader ................................ Passed 0.02 sec test 84 Start 84: template_threadedHelp 84: Test command: /builddir/build/BUILD/csg-1.6.1/aarch64-redhat-linux-gnu/share/template/template_threaded "--help" 84: Test timeout computed to be: 10000000 81: Running 3 test cases... 81: Number of H2 96 82: Running 2 test cases... 82: 82: *** No errors detected 82:  77/84 Test #82: unit_test_triplelist ............................... Passed 0.03 sec 83: ================================================== 83: ======== VOTCA (http://www.votca.org) ======== 83: ================================================== 83: 83: please submit bugs to bugs@votca.org 83: 83: template_nblist, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 83: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 83: gromacs, 2019.6 (double precision) 83: 83: rough template for rdf calculations 83: 83: 83: Allowed options: 83: -h [ --help ] display this help and exit 83: --verbose be loud and noisy 83: --verbose1 be very loud and noisy 83: -v [ --verbose2 ] be extremly loud and noisy 83: --top arg atomistic topology file 83: 83: RDF options: 83: --c arg (=1) the cutoff 83: 83: Trajectory options: 83: --trj arg atomistic trajectory file 83: --begin arg (=0) skip frames before this time (only works for 83: Gromacs files) 83: --first-frame arg (=0) start with this frame 83: --nframes arg process the given number of frames 83: 78/84 Test #83: template_serialHelp ................................ Passed 0.02 sec 84: ================================================== 84: ======== VOTCA (http://www.votca.org) ======== 84: ================================================== 84: 84: please submit bugs to bugs@votca.org 84: 84: template_threaded_rdf, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 84: votca_tools, version 1.6.1 (compiled Aug 4 2020, 00:00:00) 84: gromacs, 2019.6 (double precision) 84: 84: template for threaded rdf calculations 84: 84: 84: Allowed options: 84: -h [ --help ] display this help and exit 84: --verbose be loud and noisy 84: --verbose1 be very loud and noisy 84: -v [ --verbose2 ] be extremly loud and noisy 84: --top arg atomistic topology file 84: 84: RDF options: 84: --c arg (=1) the cutoff 84: 84: Threading options: 84: --nt arg (=1) number of threads 84: 84: Trajectory options: 84: --trj arg atomistic trajectory file 84: --begin arg (=0) skip frames before this time (only works for 84: Gromacs files) 84: --first-frame arg (=0) start with this frame 84: --nframes arg process the given number of frames 84: 79/84 Test #84: template_threadedHelp .............................. Passed 0.02 sec 81: bonded_values after pulling out of statistics 4560 19: This should be a number: -0.0413191 19: This should be a number: -0.854333 19: 19: Block No1 done! 19: Updating file: CG-CG.force 19: Updating files: CG-CG-CG.pot and: CG-CG-CG.force 19: 19: We are done, thank you very much! 80/84 Test #19: integration_Run_csg_fmatch_3body ................... Passed 0.96 sec test 20 Start 20: integration_Compare_csg_fmatch_3body_output1 20: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG.force" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.force.fmatch_3body" 20: Test timeout computed to be: 10000000 test 21 Start 21: integration_Compare_csg_fmatch_3body_output2 21: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG-CG.force" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG-CG.force.fmatch_3body" 21: Test timeout computed to be: 10000000 test 22 Start 22: integration_Compare_csg_fmatch_3body_output3 22: Test command: /usr/bin/votca_compare "--etol" "3e-5" "-f1" "CG-CG-CG.pot" "-f2" "/builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG-CG.pot.fmatch_3body" 22: Test timeout computed to be: 10000000 20: Comparing CG-CG.force and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG.force.fmatch_3body to a tolerance of 3e-05 22: Comparing CG-CG-CG.pot and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG-CG.pot.fmatch_3body to a tolerance of 3e-05 21: Comparing CG-CG-CG.force and /builddir/build/BUILD/csg-1.6.1/src/tools/references/spce/CG-CG-CG.force.fmatch_3body to a tolerance of 3e-05 81/84 Test #20: integration_Compare_csg_fmatch_3body_output1 ....... Passed 0.06 sec 82/84 Test #22: integration_Compare_csg_fmatch_3body_output3 ....... Passed 0.06 sec 83/84 Test #21: integration_Compare_csg_fmatch_3body_output2 ....... Passed 0.06 sec 81: histogram created using 4560 data-rows, written to file_interactions.txt 81: histogram created using 4560 data-rows, written to file_interactions.txt 81: histogram created using 4560 data-rows, written to file_interactions.txt 81: histogram created using 4560 data-rows, written to file_interactions.txt 81: histogram created using 4560 data-rows, written to file_interactions.txt 81: histogram created using 4560 data-rows, written to file_interactions.txt 81: histogram created using 4560 data-rows, written to file_interactions.txt 81: histogram created using 4560 data-rows, written to file_interactions.txt 81: 81: *** No errors detected 81:  84/84 Test #81: unit_test_tabulatedpotential ....................... Passed 18.18 sec 100% tests passed, 0 tests failed out of 84 Label Time Summary: csg = 22.47 sec*proc (84 tests) integration = 3.63 sec*proc (61 tests) tools = 3.86 sec*proc (66 tests) unit = 18.61 sec*proc (18 tests) votca = 22.47 sec*proc (84 tests) Total Test time (real) = 18.97 sec /builddir/build/BUILD/csg-1.6.1 + cd - + RPM_EC=0 ++ jobs -p + exit 0 Processing files: votca-csg-1.6.1-5.fc33.aarch64 Provides: votca-csg = 1.6.1-5.fc33 votca-csg(aarch-64) = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libboost_program_options.so.1.73.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvotca_csg.so.6()(64bit) libvotca_tools.so.6()(64bit) rtld(GNU_HASH) Processing files: votca-csg-libs-1.6.1-5.fc33.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.vNalCd + umask 022 + cd /builddir/build/BUILD + cd csg-1.6.1 + LICENSEDIR=/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-libs + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-libs + cp -pr LICENSE /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-libs + RPM_EC=0 ++ jobs -p + exit 0 Provides: libvotca_csg.so.6()(64bit) votca-csg-libs = 1.6.1-5.fc33 votca-csg-libs(aarch-64) = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libboost_filesystem.so.1.73.0()(64bit) libboost_program_options.so.1.73.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgromacs_d.so.4()(64bit) libhdf5.so.103()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.17)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvotca_tools.so.6()(64bit) rtld(GNU_HASH) Processing files: votca-csg-devel-1.6.1-5.fc33.aarch64 Provides: cmake(VOTCA_CSG) = 1.6.1 cmake(votca_csg) = 1.6.1 votca-csg-devel = 1.6.1-5.fc33 votca-csg-devel(aarch-64) = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: cmake-filesystem(aarch-64) libvotca_csg.so.6()(64bit) Processing files: votca-csg-common-1.6.1-5.fc33.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.uyLtNd + umask 022 + cd /builddir/build/BUILD + cd csg-1.6.1 + LICENSEDIR=/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-common + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-common + cp -pr LICENSE /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-common + RPM_EC=0 ++ jobs -p + exit 0 Provides: perl(CsgFunctions) perl(CsgSimplex) votca-csg-common = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/perl /usr/bin/python3 perl(CsgFunctions) perl(CsgSimplex) perl(Exporter) perl(POSIX) perl(constant) perl(strict) perl(vars) Processing files: votca-csg-bash-1.6.1-5.fc33.noarch Provides: votca-csg-bash = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: votca-csg-doc-1.6.1-5.fc33.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.XChsFd + umask 022 + cd /builddir/build/BUILD + cd csg-1.6.1 + DOCDIR=/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/doc/votca-csg-doc + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/doc/votca-csg-doc + cp -pr CHANGELOG.md /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/doc/votca-csg-doc + cp -pr NOTICE /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/doc/votca-csg-doc + cp -pr README.md /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/doc/votca-csg-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Jmb86e + umask 022 + cd /builddir/build/BUILD + cd csg-1.6.1 + LICENSEDIR=/builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-doc + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-doc + cp -pr LICENSE /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64/usr/share/licenses/votca-csg-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: votca-csg-doc = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: votca-csg-debugsource-1.6.1-5.fc33.aarch64 Provides: votca-csg-debugsource = 1.6.1-5.fc33 votca-csg-debugsource(aarch-64) = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: votca-csg-debuginfo-1.6.1-5.fc33.aarch64 Provides: debuginfo(build-id) = 64ff11613bed9c7c05e8e0e6154233afcb64f7bd debuginfo(build-id) = 6ed660b52de20b23bb5b506124aa969470734d71 debuginfo(build-id) = 7865e7876e8601ac7daaf2331737fa411d22dc1d debuginfo(build-id) = 9167f7501148d22ca2a562cfd35cbc2101402fcc debuginfo(build-id) = aa14c20572c989b74ed9ea301b0ba901c9692c89 debuginfo(build-id) = aab76af14b0d8bfd1b33401623442d7c364d6718 debuginfo(build-id) = b3f787e9cecd50be050bd7ee7ce3c6fe209413eb debuginfo(build-id) = b9f9fd35e1aea8195881abe4e53788d46ffaa6b5 debuginfo(build-id) = ba3cb33fffabfde58712f6f8e9134cff655f6080 debuginfo(build-id) = c1b3c3c9cc729f6b7f7341e38e1e582e3df2079e debuginfo(build-id) = f4cfceec772d5425236e61dd19dc44bfe44e8222 debuginfo(build-id) = f6c27bb2653d57f5483ac44d418f483e05922d1b votca-csg-debuginfo = 1.6.1-5.fc33 votca-csg-debuginfo(aarch-64) = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: votca-csg-debugsource(aarch-64) = 1.6.1-5.fc33 Processing files: votca-csg-libs-debuginfo-1.6.1-5.fc33.aarch64 Provides: debuginfo(build-id) = 91cd2a5e094eb2f8a8227e388707e9f652b53e1f votca-csg-libs-debuginfo = 1.6.1-5.fc33 votca-csg-libs-debuginfo(aarch-64) = 1.6.1-5.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: votca-csg-debugsource(aarch-64) = 1.6.1-5.fc33 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64 Wrote: /builddir/build/RPMS/votca-csg-libs-1.6.1-5.fc33.aarch64.rpm Wrote: /builddir/build/RPMS/votca-csg-doc-1.6.1-5.fc33.noarch.rpm Wrote: /builddir/build/RPMS/votca-csg-1.6.1-5.fc33.aarch64.rpm Wrote: /builddir/build/RPMS/votca-csg-debugsource-1.6.1-5.fc33.aarch64.rpm Wrote: /builddir/build/RPMS/votca-csg-common-1.6.1-5.fc33.noarch.rpm Wrote: /builddir/build/RPMS/votca-csg-bash-1.6.1-5.fc33.noarch.rpm Wrote: /builddir/build/RPMS/votca-csg-devel-1.6.1-5.fc33.aarch64.rpm Wrote: /builddir/build/RPMS/votca-csg-libs-debuginfo-1.6.1-5.fc33.aarch64.rpm Wrote: /builddir/build/RPMS/votca-csg-debuginfo-1.6.1-5.fc33.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.O7G9Nf + umask 022 + cd /builddir/build/BUILD + cd csg-1.6.1 + /usr/bin/rm -rf /builddir/build/BUILDROOT/votca-csg-1.6.1-5.fc33.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0