Mock Version: 1.4.21 Mock Version: 1.4.21 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/petsc4py.spec'], chrootPath='/var/lib/mock/epel7-build-18788260-1328317/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/petsc4py.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory sh: /usr/bin/python2: No such file or directory Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/petsc4py-3.11.0-12.el7.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/petsc4py.spec'], chrootPath='/var/lib/mock/epel7-build-18788260-1328317/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/petsc4py.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.IgGZDv + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf petsc4py-3.11.0 + /usr/bin/mkdir -p petsc4py-3.11.0 + cd petsc4py-3.11.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/petsc4py-3.11.0.tar.gz + /usr/bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -rf petsc4py-3.11.0/petsc4py.egg-info + cp -a petsc4py-3.11.0 petsc4py-mpich + mv petsc4py-3.11.0 petsc4py-openmpi + pushd petsc4py-openmpi ~/build/BUILD/petsc4py-3.11.0/petsc4py-openmpi ~/build/BUILD/petsc4py-3.11.0 Patch #0 (petsc4py-openmpi_set_dir.patch): + echo 'Patch #0 (petsc4py-openmpi_set_dir.patch):' + /usr/bin/cat /builddir/build/SOURCES/petsc4py-openmpi_set_dir.patch + /usr/bin/patch -p0 --fuzz=0 patching file conf/baseconf.py Hunk #1 succeeded at 127 (offset 3 lines). Hunk #2 succeeded at 140 (offset 3 lines). + sed -e 's|@@arch@@|x86_64|g' -i conf/baseconf.py + sed -e 's|@@bits@@|64|g' -i conf/baseconf.py + sed -e 's|-@@petscver@@||g' -i conf/baseconf.py + popd ~/build/BUILD/petsc4py-3.11.0 ~/build/BUILD/petsc4py-3.11.0/petsc4py-mpich ~/build/BUILD/petsc4py-3.11.0 Patch #1 (petsc4py-mpich_set_dir.patch): + pushd petsc4py-mpich + echo 'Patch #1 (petsc4py-mpich_set_dir.patch):' + /usr/bin/cat /builddir/build/SOURCES/petsc4py-mpich_set_dir.patch + /usr/bin/patch -p0 --fuzz=0 patching file conf/baseconf.py Hunk #1 succeeded at 127 (offset 3 lines). Hunk #2 succeeded at 140 (offset 3 lines). + sed -e 's|@@arch@@|x86_64|g' -i conf/baseconf.py + sed -e 's|@@bits@@|64|g' -i conf/baseconf.py + sed -e 's|-@@petscver@@||g' -i conf/baseconf.py + popd + exit 0 ~/build/BUILD/petsc4py-3.11.0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Vaw0TQ + umask 022 + cd /builddir/build/BUILD ~/build/BUILD/petsc4py-3.11.0/petsc4py-openmpi ~/build/BUILD/petsc4py-3.11.0 + cd petsc4py-3.11.0 + pushd petsc4py-openmpi + source /opt/rh/devtoolset-8/enable ++ export PATH=/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ PATH=/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export MANPATH=/opt/rh/devtoolset-8/root/usr/share/man: ++ MANPATH=/opt/rh/devtoolset-8/root/usr/share/man: ++ export INFOPATH=/opt/rh/devtoolset-8/root/usr/share/info ++ INFOPATH=/opt/rh/devtoolset-8/root/usr/share/info ++ export PCP_DIR=/opt/rh/devtoolset-8/root ++ PCP_DIR=/opt/rh/devtoolset-8/root ++ export PERL5LIB=/opt/rh/devtoolset-8/root//usr/lib64/perl5/vendor_perl:/opt/rh/devtoolset-8/root/usr/lib/perl5:/opt/rh/devtoolset-8/root//usr/share/perl5/vendor_perl ++ PERL5LIB=/opt/rh/devtoolset-8/root//usr/lib64/perl5/vendor_perl:/opt/rh/devtoolset-8/root/usr/lib/perl5:/opt/rh/devtoolset-8/root//usr/share/perl5/vendor_perl +++ rpm --eval '%{_libdir}' ++ rpmlibdir=/usr/lib64 ++ '[' /usr/lib64 '!=' /usr/ ']' ++ rpmlibdir32=:/opt/rh/devtoolset-8/root/usr/lib ++ export LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ export LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ pythonvers=2.7 ++ export PYTHONPATH=/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages ++ PYTHONPATH=/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages ++ export PKG_CONFIG_PATH=/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ PKG_CONFIG_PATH=/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1936069 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/opt/rh/devtoolset-8/root/usr/share/man:' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-x86_64:/opt/rh/devtoolset-8/root/usr/share/man: ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi/bin:/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export PETSC_DIR=/usr + PETSC_DIR=/usr + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + /usr/bin/python2 setup.py build '--executable=/usr/bin/python2 -s' running build running build_src running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/petsc4py copying src/__main__.py -> build/lib.linux-x86_64-2.7/petsc4py copying src/__init__.py -> build/lib.linux-x86_64-2.7/petsc4py copying src/PETSc.py -> build/lib.linux-x86_64-2.7/petsc4py creating build/lib.linux-x86_64-2.7/petsc4py/lib copying src/lib/__init__.py -> build/lib.linux-x86_64-2.7/petsc4py/lib creating build/lib.linux-x86_64-2.7/petsc4py/include creating build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.h -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc.h -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc_api.h -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/numpy.h -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.i -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/PETSc.pxd -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pxd -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pyx -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/PETSc.pxd -> build/lib.linux-x86_64-2.7/petsc4py copying src/lib/petsc.cfg -> build/lib.linux-x86_64-2.7/petsc4py/lib running build_ext PETSC_DIR: /usr PETSC_ARCH: version: 3.11.3 release integer-size: 32-bit scalar-type: real precision: double language: CONLY compiler: mpicc linker: mpicc building 'PETSc' extension creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/src mpicc -pthread -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -DPETSC_DIR=/usr -I/usr/include/openmpi-x86_64 -I/usr/include/openmpi-x86_64/hypre -I/usr/lib64/gfortran/modules/openmpi/petsc -I/usr/include/openmpi-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/PETSc.c -o build/temp.linux-x86_64-2.7/src/PETSc.o In file included from /usr/include/python2.7/Python.h:80, from src/petsc4py.PETSc.c:4, from src/PETSc.c:4: src/petsc4py.PETSc.c: In function '__pyx_f_8petsc4py_5PETSc_toBool': /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/petsc4py.PETSc.c:2262:27: note: in expansion of macro 'Py_INCREF' #define __Pyx_INCREF(r) Py_INCREF(r) ^~~~~~~~~ src/petsc4py.PETSc.c:9626:5: note: in expansion of macro '__Pyx_INCREF' __Pyx_INCREF(Py_True); ^~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/petsc4py.PETSc.c:2262:27: note: in expansion of macro 'Py_INCREF' #define __Pyx_INCREF(r) Py_INCREF(r) ^~~~~~~~~ src/petsc4py.PETSc.c:9629:5: note: in expansion of macro '__Pyx_INCREF' __Pyx_INCREF(Py_False); ^~~~~~~~~~~~ src/petsc4py.PETSc.c: In function '__Pyx_PyInt_EqObjC': /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309772:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309778:21: note: in expansion of macro 'Py_RETURN_TRUE' if (a == b) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309778:42: note: in expansion of macro 'Py_RETURN_FALSE' if (a == b) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309788:28: note: in expansion of macro 'Py_RETURN_TRUE' if (size == 0) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309788:49: note: in expansion of macro 'Py_RETURN_FALSE' if (size == 0) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309791:17: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309796:17: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309824:27: note: in expansion of macro 'Py_RETURN_TRUE' if (unequal == 0) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309824:48: note: in expansion of macro 'Py_RETURN_FALSE' if (unequal == 0) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309830:37: note: in expansion of macro 'Py_RETURN_TRUE' if ((double)a == (double)b) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309830:58: note: in expansion of macro 'Py_RETURN_FALSE' if ((double)a == (double)b) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ src/petsc4py.PETSc.c: In function '__Pyx_PyBool_FromLong': /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/petsc4py.PETSc.c:694:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ src/petsc4py.PETSc.c:322541:14: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/petsc4py.PETSc.c:694:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ src/petsc4py.PETSc.c:322541:38: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ In file included from src/PETSc.c:4: src/petsc4py.PETSc.c: In function 'initPETSc': src/petsc4py.PETSc.c:295243:22: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without __Pyx_PyMODINIT_FUNC initPETSc(void) ^~~~~~~~~ mpicc -pthread -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -DPETSC_DIR=/usr -I/usr/include/openmpi-x86_64 -I/usr/include/openmpi-x86_64/hypre -I/usr/lib64/gfortran/modules/openmpi/petsc -I/usr/include/openmpi-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/libpetsc4py.c -o build/temp.linux-x86_64-2.7/src/libpetsc4py.o In file included from /usr/include/python2.7/Python.h:80, from src/libpetsc4py.c:3: src/libpetsc4py/libpetsc4py.c: In function '__Pyx_PyBool_FromLong': /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/libpetsc4py/libpetsc4py.c:680:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ src/libpetsc4py/libpetsc4py.c:31098:14: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/libpetsc4py/libpetsc4py.c:680:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ src/libpetsc4py/libpetsc4py.c:31098:38: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ mpicc -pthread -Wl,-z,relro -fPIC -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -Wl,-z,relro build/temp.linux-x86_64-2.7/src/PETSc.o build/temp.linux-x86_64-2.7/src/libpetsc4py.o -L/usr/lib64/openmpi/lib -Wl,-rpath,/usr/lib64/openmpi/lib -lpetsc -lpython2.7 -o build/lib.linux-x86_64-2.7/petsc4py/lib/PETSc.so writing build/lib.linux-x86_64-2.7/petsc4py/lib/petsc.cfg + sleep 1 + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + LDFLAGS='-Wl,-z,relro ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_src running build_py creating build/lib.linux-x86_64-3.6 creating build/lib.linux-x86_64-3.6/petsc4py copying src/__main__.py -> build/lib.linux-x86_64-3.6/petsc4py copying src/__init__.py -> build/lib.linux-x86_64-3.6/petsc4py copying src/PETSc.py -> build/lib.linux-x86_64-3.6/petsc4py creating build/lib.linux-x86_64-3.6/petsc4py/lib copying src/lib/__init__.py -> build/lib.linux-x86_64-3.6/petsc4py/lib creating build/lib.linux-x86_64-3.6/petsc4py/include creating build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.h -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc.h -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc_api.h -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/numpy.h -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.i -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/PETSc.pxd -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pxd -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pyx -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/PETSc.pxd -> build/lib.linux-x86_64-3.6/petsc4py copying src/lib/petsc.cfg -> build/lib.linux-x86_64-3.6/petsc4py/lib running build_ext PETSC_DIR: /usr PETSC_ARCH: version: 3.11.3 release integer-size: 32-bit scalar-type: real precision: double language: CONLY compiler: mpicc linker: mpicc building 'PETSc' extension creating build/temp.linux-x86_64-3.6 creating build/temp.linux-x86_64-3.6/src mpicc -pthread -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -DPETSC_DIR=/usr -I/usr/include/openmpi-x86_64 -I/usr/include/openmpi-x86_64/hypre -I/usr/lib64/gfortran/modules/openmpi/petsc -I/usr/include/openmpi-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c src/PETSc.c -o build/temp.linux-x86_64-3.6/src/PETSc.o In file included from src/PETSc.c:4: src/petsc4py.PETSc.c: In function '__pyx_pymod_exec_PETSc': src/petsc4py.PETSc.c:295313:30: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without static CYTHON_SMALL_CODE int __pyx_pymod_exec_PETSc(PyObject *__pyx_pyinit_module) ^~~~~~~~~~~~~~~~~~~~~~ mpicc -pthread -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -DPETSC_DIR=/usr -I/usr/include/openmpi-x86_64 -I/usr/include/openmpi-x86_64/hypre -I/usr/lib64/gfortran/modules/openmpi/petsc -I/usr/include/openmpi-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c src/libpetsc4py.c -o build/temp.linux-x86_64-3.6/src/libpetsc4py.o mpicc -pthread -Wl,-z,relro -fPIC -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -shared -g -Wl,-z,relro build/temp.linux-x86_64-3.6/src/PETSc.o build/temp.linux-x86_64-3.6/src/libpetsc4py.o -L/usr/lib64/openmpi/lib -Wl,--enable-new-dtags,-R/usr/lib64/openmpi/lib -lpetsc -lpython3.6m -o build/lib.linux-x86_64-3.6/petsc4py/lib/PETSc.cpython-36m-x86_64-linux-gnu.so writing build/lib.linux-x86_64-3.6/petsc4py/lib/petsc.cfg + sleep 1 + popd ~/build/BUILD/petsc4py-3.11.0 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1936069 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ';export' 'LD_LIBRARY_PATH;MANPATH=/opt/rh/devtoolset-8/root/usr/share/man:' ';export' 'MANPATH;PATH=/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PYTHONPATH=/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages' ';export' 'PYTHONPATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' '_LMFILES_;' ++ LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ export LD_LIBRARY_PATH ++ MANPATH=/opt/rh/devtoolset-8/root/usr/share/man: ++ export MANPATH ++ PATH=/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PYTHONPATH=/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages ++ export PYTHONPATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset _LMFILES_ ~/build/BUILD/petsc4py-3.11.0/petsc4py-mpich ~/build/BUILD/petsc4py-3.11.0 + pushd petsc4py-mpich + source /opt/rh/devtoolset-8/enable ++ export PATH=/opt/rh/devtoolset-8/root/usr/bin:/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ PATH=/opt/rh/devtoolset-8/root/usr/bin:/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export MANPATH=/opt/rh/devtoolset-8/root/usr/share/man:/opt/rh/devtoolset-8/root/usr/share/man: ++ MANPATH=/opt/rh/devtoolset-8/root/usr/share/man:/opt/rh/devtoolset-8/root/usr/share/man: ++ export INFOPATH=/opt/rh/devtoolset-8/root/usr/share/info:/opt/rh/devtoolset-8/root/usr/share/info ++ INFOPATH=/opt/rh/devtoolset-8/root/usr/share/info:/opt/rh/devtoolset-8/root/usr/share/info ++ export PCP_DIR=/opt/rh/devtoolset-8/root ++ PCP_DIR=/opt/rh/devtoolset-8/root ++ export PERL5LIB=/opt/rh/devtoolset-8/root//usr/lib64/perl5/vendor_perl:/opt/rh/devtoolset-8/root/usr/lib/perl5:/opt/rh/devtoolset-8/root//usr/share/perl5/vendor_perl:/opt/rh/devtoolset-8/root//usr/lib64/perl5/vendor_perl:/opt/rh/devtoolset-8/root/usr/lib/perl5:/opt/rh/devtoolset-8/root//usr/share/perl5/vendor_perl ++ PERL5LIB=/opt/rh/devtoolset-8/root//usr/lib64/perl5/vendor_perl:/opt/rh/devtoolset-8/root/usr/lib/perl5:/opt/rh/devtoolset-8/root//usr/share/perl5/vendor_perl:/opt/rh/devtoolset-8/root//usr/lib64/perl5/vendor_perl:/opt/rh/devtoolset-8/root/usr/lib/perl5:/opt/rh/devtoolset-8/root//usr/share/perl5/vendor_perl +++ rpm --eval '%{_libdir}' ++ rpmlibdir=/usr/lib64 ++ '[' /usr/lib64 '!=' /usr/ ']' ++ rpmlibdir32=:/opt/rh/devtoolset-8/root/usr/lib ++ export LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ export LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ pythonvers=2.7 ++ export PYTHONPATH=/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages ++ PYTHONPATH=/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages ++ export PKG_CONFIG_PATH=/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig:/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ PKG_CONFIG_PATH=/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig:/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1936069 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh load mpi/mpich-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/opt/rh/devtoolset-8/root/usr/share/man:/opt/rh/devtoolset-8/root/usr/share/man:' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich/bin:/opt/rh/devtoolset-8/root/usr/bin:/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig:/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich:/opt/rh/devtoolset-8/root/usr/share/man:/opt/rh/devtoolset-8/root/usr/share/man: ++ export MANPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/mpich/bin:/opt/rh/devtoolset-8/root/usr/bin:/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig:/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + export PETSC_DIR=/usr + PETSC_DIR=/usr + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + /usr/bin/python2 setup.py build '--executable=/usr/bin/python2 -s' running build running build_src running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/petsc4py copying src/__main__.py -> build/lib.linux-x86_64-2.7/petsc4py copying src/__init__.py -> build/lib.linux-x86_64-2.7/petsc4py copying src/PETSc.py -> build/lib.linux-x86_64-2.7/petsc4py creating build/lib.linux-x86_64-2.7/petsc4py/lib copying src/lib/__init__.py -> build/lib.linux-x86_64-2.7/petsc4py/lib creating build/lib.linux-x86_64-2.7/petsc4py/include creating build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.h -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc.h -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc_api.h -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/numpy.h -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.i -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/PETSc.pxd -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pxd -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pyx -> build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py copying src/PETSc.pxd -> build/lib.linux-x86_64-2.7/petsc4py copying src/lib/petsc.cfg -> build/lib.linux-x86_64-2.7/petsc4py/lib running build_ext PETSC_DIR: /usr PETSC_ARCH: version: 3.11.3 release integer-size: 32-bit scalar-type: real precision: double language: CONLY compiler: mpicc linker: mpicc building 'PETSc' extension creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/src mpicc -pthread -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -DPETSC_DIR=/usr -I/usr/include/mpich-x86_64 -I/usr/include/mpich-x86_64/hypre -I/usr/lib64/gfortran/modules/mpich/petsc -I/usr/include/mpich-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/PETSc.c -o build/temp.linux-x86_64-2.7/src/PETSc.o In file included from /usr/include/python2.7/Python.h:80, from src/petsc4py.PETSc.c:4, from src/PETSc.c:4: src/petsc4py.PETSc.c: In function '__pyx_f_8petsc4py_5PETSc_toBool': /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/petsc4py.PETSc.c:2262:27: note: in expansion of macro 'Py_INCREF' #define __Pyx_INCREF(r) Py_INCREF(r) ^~~~~~~~~ src/petsc4py.PETSc.c:9626:5: note: in expansion of macro '__Pyx_INCREF' __Pyx_INCREF(Py_True); ^~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/petsc4py.PETSc.c:2262:27: note: in expansion of macro 'Py_INCREF' #define __Pyx_INCREF(r) Py_INCREF(r) ^~~~~~~~~ src/petsc4py.PETSc.c:9629:5: note: in expansion of macro '__Pyx_INCREF' __Pyx_INCREF(Py_False); ^~~~~~~~~~~~ src/petsc4py.PETSc.c: In function '__Pyx_PyInt_EqObjC': /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309772:9: note: in expansion of macro 'Py_RETURN_TRUE' Py_RETURN_TRUE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309778:21: note: in expansion of macro 'Py_RETURN_TRUE' if (a == b) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309778:42: note: in expansion of macro 'Py_RETURN_FALSE' if (a == b) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309788:28: note: in expansion of macro 'Py_RETURN_TRUE' if (size == 0) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309788:49: note: in expansion of macro 'Py_RETURN_FALSE' if (size == 0) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309791:17: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309796:17: note: in expansion of macro 'Py_RETURN_FALSE' Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309824:27: note: in expansion of macro 'Py_RETURN_TRUE' if (unequal == 0) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309824:48: note: in expansion of macro 'Py_RETURN_FALSE' if (unequal == 0) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:27:31: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_TRUE return Py_INCREF(Py_True), Py_True ^~~~~~~~~ src/petsc4py.PETSc.c:309830:37: note: in expansion of macro 'Py_RETURN_TRUE' if ((double)a == (double)b) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ /usr/include/python2.7/boolobject.h:28:32: note: in expansion of macro 'Py_INCREF' #define Py_RETURN_FALSE return Py_INCREF(Py_False), Py_False ^~~~~~~~~ src/petsc4py.PETSc.c:309830:58: note: in expansion of macro 'Py_RETURN_FALSE' if ((double)a == (double)b) Py_RETURN_TRUE; else Py_RETURN_FALSE; ^~~~~~~~~~~~~~~ src/petsc4py.PETSc.c: In function '__Pyx_PyBool_FromLong': /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/petsc4py.PETSc.c:694:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ src/petsc4py.PETSc.c:322541:14: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/petsc4py.PETSc.c:694:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ src/petsc4py.PETSc.c:322541:38: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ In file included from src/PETSc.c:4: src/petsc4py.PETSc.c: In function 'initPETSc': src/petsc4py.PETSc.c:295243:22: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without __Pyx_PyMODINIT_FUNC initPETSc(void) ^~~~~~~~~ mpicc -pthread -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -DPETSC_DIR=/usr -I/usr/include/mpich-x86_64 -I/usr/include/mpich-x86_64/hypre -I/usr/lib64/gfortran/modules/mpich/petsc -I/usr/include/mpich-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c src/libpetsc4py.c -o build/temp.linux-x86_64-2.7/src/libpetsc4py.o In file included from /usr/include/python2.7/Python.h:80, from src/libpetsc4py.c:3: src/libpetsc4py/libpetsc4py.c: In function '__Pyx_PyBool_FromLong': /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/libpetsc4py/libpetsc4py.c:680:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ src/libpetsc4py/libpetsc4py.c:31098:14: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ /usr/include/python2.7/object.h:767:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ src/libpetsc4py/libpetsc4py.c:680:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ src/libpetsc4py/libpetsc4py.c:31098:38: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ mpicc -pthread -Wl,-z,relro -fPIC -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -Wl,-z,relro build/temp.linux-x86_64-2.7/src/PETSc.o build/temp.linux-x86_64-2.7/src/libpetsc4py.o -L/usr/lib64/mpich/lib -Wl,-rpath,/usr/lib64/mpich/lib -lpetsc -lpython2.7 -o build/lib.linux-x86_64-2.7/petsc4py/lib/PETSc.so writing build/lib.linux-x86_64-2.7/petsc4py/lib/petsc.cfg + sleep 1 + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + LDFLAGS='-Wl,-z,relro ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_src running build_py creating build/lib.linux-x86_64-3.6 creating build/lib.linux-x86_64-3.6/petsc4py copying src/__main__.py -> build/lib.linux-x86_64-3.6/petsc4py copying src/__init__.py -> build/lib.linux-x86_64-3.6/petsc4py copying src/PETSc.py -> build/lib.linux-x86_64-3.6/petsc4py creating build/lib.linux-x86_64-3.6/petsc4py/lib copying src/lib/__init__.py -> build/lib.linux-x86_64-3.6/petsc4py/lib creating build/lib.linux-x86_64-3.6/petsc4py/include creating build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.h -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc.h -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.PETSc_api.h -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/numpy.h -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/petsc4py.i -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/PETSc.pxd -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pxd -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/include/petsc4py/__init__.pyx -> build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py copying src/PETSc.pxd -> build/lib.linux-x86_64-3.6/petsc4py copying src/lib/petsc.cfg -> build/lib.linux-x86_64-3.6/petsc4py/lib running build_ext PETSC_DIR: /usr PETSC_ARCH: version: 3.11.3 release integer-size: 32-bit scalar-type: real precision: double language: CONLY compiler: mpicc linker: mpicc building 'PETSc' extension creating build/temp.linux-x86_64-3.6 creating build/temp.linux-x86_64-3.6/src mpicc -pthread -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -DPETSC_DIR=/usr -I/usr/include/mpich-x86_64 -I/usr/include/mpich-x86_64/hypre -I/usr/lib64/gfortran/modules/mpich/petsc -I/usr/include/mpich-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c src/PETSc.c -o build/temp.linux-x86_64-3.6/src/PETSc.o In file included from src/PETSc.c:4: src/petsc4py.PETSc.c: In function '__pyx_pymod_exec_PETSc': src/petsc4py.PETSc.c:295313:30: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without static CYTHON_SMALL_CODE int __pyx_pymod_exec_PETSc(PyObject *__pyx_pyinit_module) ^~~~~~~~~~~~~~~~~~~~~~ mpicc -pthread -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -DPETSC_DIR=/usr -I/usr/include/mpich-x86_64 -I/usr/include/mpich-x86_64/hypre -I/usr/lib64/gfortran/modules/mpich/petsc -I/usr/include/mpich-x86_64/petsc -I/usr/include -Isrc/include -I/usr/lib64/python3.6/site-packages/numpy/core/include -I/usr/include/python3.6m -c src/libpetsc4py.c -o build/temp.linux-x86_64-3.6/src/libpetsc4py.o mpicc -pthread -Wl,-z,relro -fPIC -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3 -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -shared -g -Wl,-z,relro build/temp.linux-x86_64-3.6/src/PETSc.o build/temp.linux-x86_64-3.6/src/libpetsc4py.o -L/usr/lib64/mpich/lib -Wl,--enable-new-dtags,-R/usr/lib64/mpich/lib -lpetsc -lpython3.6m -o build/lib.linux-x86_64-3.6/petsc4py/lib/PETSc.cpython-36m-x86_64-linux-gnu.so writing build/lib.linux-x86_64-3.6/petsc4py/lib/petsc.cfg + sleep 1 + popd ~/build/BUILD/petsc4py-3.11.0 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1936069 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/mpich-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh unload mpi/mpich-x86_64 + eval LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ';export' 'LD_LIBRARY_PATH;MANPATH=/opt/rh/devtoolset-8/root/usr/share/man:/opt/rh/devtoolset-8/root/usr/share/man:' ';export' 'MANPATH;PATH=/opt/rh/devtoolset-8/root/usr/bin:/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PKG_CONFIG_PATH=/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig:/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages' ';export' 'PYTHONPATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' '_LMFILES_;' ++ LD_LIBRARY_PATH=/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib:/opt/rh/devtoolset-8/root/usr/lib64/dyninst:/opt/rh/devtoolset-8/root/usr/lib/dyninst:/opt/rh/devtoolset-8/root/usr/lib64:/opt/rh/devtoolset-8/root/usr/lib ++ export LD_LIBRARY_PATH ++ MANPATH=/opt/rh/devtoolset-8/root/usr/share/man:/opt/rh/devtoolset-8/root/usr/share/man: ++ export MANPATH ++ PATH=/opt/rh/devtoolset-8/root/usr/bin:/opt/rh/devtoolset-8/root/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PKG_CONFIG_PATH=/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig:/opt/rh/devtoolset-8/root/usr/lib64/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib64/python2.7/site-packages:/opt/rh/devtoolset-8/root/usr/lib/python2.7/site-packages ++ export PYTHONPATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset _LMFILES_ + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.EJW0Oe + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 ++ dirname /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 + cd petsc4py-3.11.0 + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1936829 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ~/build/BUILD/petsc4py-3.11.0/petsc4py-openmpi ~/build/BUILD/petsc4py-3.11.0 ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + pushd petsc4py-openmpi + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + /usr/bin/python2 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 running install running install_lib PETSC_DIR not specified creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64 creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7 creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/__main__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib copying build/lib.linux-x86_64-2.7/petsc4py/lib/petsc.cfg -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib copying build/lib.linux-x86_64-2.7/petsc4py/lib/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib copying build/lib.linux-x86_64-2.7/petsc4py/lib/PETSc.so -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib copying build/lib.linux-x86_64-2.7/petsc4py/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/__init__.pyx -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/petsc4py.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/petsc4py.PETSc.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/__init__.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/petsc4py.i -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/petsc4py.PETSc_api.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/numpy.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/PETSc.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/__main__.py to __main__.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/PETSc.py to PETSc.pyc writing byte-compilation script '/tmp/tmp1dYxFN.py' /usr/bin/python2 -O /tmp/tmp1dYxFN.py removing /tmp/tmp1dYxFN.py running install_egg_info running egg_info creating petsc4py.egg-info writing requirements to petsc4py.egg-info/requires.txt writing petsc4py.egg-info/PKG-INFO writing top-level names to petsc4py.egg-info/top_level.txt writing dependency_links to petsc4py.egg-info/dependency_links.txt writing manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'petsc4py.egg-info/SOURCES.txt' Copying petsc4py.egg-info to /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py-3.11.0-py2.7.egg-info running install_scripts + MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/openmpi + cp -a /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/openmpi/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py + cp -a /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py-3.11.0-py2.7.egg-info /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/openmpi/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py-3.11.0-py2.7.egg-info + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + LDFLAGS='-Wl,-z,relro ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 running install PETSC_DIR not specified running install_lib creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6 creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/__main__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.6/petsc4py/lib/PETSc.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.6/petsc4py/lib/petsc.cfg -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.6/petsc4py/lib/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.6/petsc4py/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/__init__.pyx -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/petsc4py.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/petsc4py.PETSc.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/__init__.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/petsc4py.i -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/petsc4py.PETSc_api.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/numpy.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/PETSc.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/__main__.py to __main__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/PETSc.py to PETSc.cpython-36.pyc writing byte-compilation script '/tmp/tmpmv4odvsn.py' /usr/bin/python3 /tmp/tmpmv4odvsn.py removing /tmp/tmpmv4odvsn.py running install_egg_info running egg_info writing petsc4py.egg-info/PKG-INFO writing dependency_links to petsc4py.egg-info/dependency_links.txt writing requirements to petsc4py.egg-info/requires.txt writing top-level names to petsc4py.egg-info/top_level.txt reading manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'petsc4py.egg-info/SOURCES.txt' Copying petsc4py.egg-info to /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py-3.11.0-py3.6.egg-info running install_scripts + MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi + cp -a /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py + cp -a /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py-3.11.0-py3.6.egg-info /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py-3.11.0-py3.6.egg-info + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/include/openmpi-x86_64/petsc4py + cp -a src/include/compat src/include/compat.h src/include/custom.h src/include/cython.h src/include/initpkg.h src/include/pep3118.h src/include/petsc4py src/include/scalar.h /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/include/openmpi-x86_64/petsc4py/ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1936829 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ ~/build/BUILD/petsc4py-3.11.0 ~/build/BUILD/petsc4py-3.11.0/petsc4py-mpich ~/build/BUILD/petsc4py-3.11.0 + popd + pushd petsc4py-mpich + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1936829 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh load mpi/mpich-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + /usr/bin/python2 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 running install PETSC_DIR not specified running install_lib creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/__main__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib copying build/lib.linux-x86_64-2.7/petsc4py/lib/petsc.cfg -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib copying build/lib.linux-x86_64-2.7/petsc4py/lib/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib copying build/lib.linux-x86_64-2.7/petsc4py/lib/PETSc.so -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib copying build/lib.linux-x86_64-2.7/petsc4py/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/__init__.pyx -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/petsc4py.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/petsc4py.PETSc.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/__init__.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/petsc4py.i -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/petsc4py.PETSc_api.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/include/petsc4py/numpy.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-2.7/petsc4py/PETSc.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/__main__.py to __main__.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/lib/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/__init__.py to __init__.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py/PETSc.py to PETSc.pyc writing byte-compilation script '/tmp/tmprPKpsq.py' /usr/bin/python2 -O /tmp/tmprPKpsq.py removing /tmp/tmprPKpsq.py running install_egg_info running egg_info creating petsc4py.egg-info writing requirements to petsc4py.egg-info/requires.txt writing petsc4py.egg-info/PKG-INFO writing top-level names to petsc4py.egg-info/top_level.txt writing dependency_links to petsc4py.egg-info/dependency_links.txt writing manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'petsc4py.egg-info/SOURCES.txt' Copying petsc4py.egg-info to /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py-3.11.0-py2.7.egg-info running install_scripts + MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/mpich + cp -a /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/mpich/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py + cp -a /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py-3.11.0-py2.7.egg-info /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/mpich/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/petsc4py-3.11.0-py2.7.egg-info + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + LDFLAGS='-Wl,-z,relro ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 running install PETSC_DIR not specified running install_lib creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/__main__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.6/petsc4py/lib/PETSc.cpython-36m-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.6/petsc4py/lib/petsc.cfg -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.6/petsc4py/lib/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib copying build/lib.linux-x86_64-3.6/petsc4py/__init__.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include creating /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/__init__.pyx -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/petsc4py.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/PETSc.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/petsc4py.PETSc.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/__init__.pxd -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/petsc4py.i -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/petsc4py.PETSc_api.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/include/petsc4py/numpy.h -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/include/petsc4py copying build/lib.linux-x86_64-3.6/petsc4py/PETSc.py -> /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/__main__.py to __main__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/lib/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/__init__.py to __init__.cpython-36.pyc byte-compiling /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py/PETSc.py to PETSc.cpython-36.pyc writing byte-compilation script '/tmp/tmpdofj6jdx.py' /usr/bin/python3 /tmp/tmpdofj6jdx.py removing /tmp/tmpdofj6jdx.py running install_egg_info running egg_info writing petsc4py.egg-info/PKG-INFO writing dependency_links to petsc4py.egg-info/dependency_links.txt writing requirements to petsc4py.egg-info/requires.txt writing top-level names to petsc4py.egg-info/top_level.txt reading manifest file 'petsc4py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'petsc4py.egg-info/SOURCES.txt' Copying petsc4py.egg-info to /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py-3.11.0-py3.6.egg-info running install_scripts + MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/mpich + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/mpich + cp -a /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/mpich/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py + cp -a /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py-3.11.0-py3.6.egg-info /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/mpich/ + rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/petsc4py-3.11.0-py3.6.egg-info + mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/include/mpich-x86_64/petsc4py + cp -a src/include/compat src/include/compat.h src/include/custom.h src/include/cython.h src/include/initpkg.h src/include/pep3118.h src/include/petsc4py src/include/scalar.h /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/include/mpich-x86_64/petsc4py/ + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1936829 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/mpich-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh unload mpi/mpich-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ~/build/BUILD/petsc4py-3.11.0 ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset PYTHONPATH ++ unset _LMFILES_ + popd + /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 /builddir/build/BUILD/petsc4py-3.11.0 extracting debug info from /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi/petsc4py/lib/PETSc.cpython-36m-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/mpich/petsc4py/lib/PETSc.cpython-36m-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/openmpi/petsc4py/lib/PETSc.so extracting debug info from /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/mpich/petsc4py/lib/PETSc.so /usr/lib/rpm/sepdebugcrcfix: Updated 4 CRC32s, 0 CRC32s did match. 55698 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 Bytecompiling .py files below /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6 using /usr/bin/python3.6 Bytecompiling .py files below /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7 using /usr/bin/python2.7 Bytecompiling .py files below /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib/debug/usr/lib64/python3.6 using /usr/bin/python3.6 Bytecompiling .py files below /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib/debug/usr/lib64/python2.7 using /usr/bin/python2.7 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/lib/rpm/redhat/brp-java-repack-jars Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.mhPGpU + umask 022 + cd /builddir/build/BUILD ~/build/BUILD/petsc4py-3.11.0/petsc4py-openmpi ~/build/BUILD/petsc4py-3.11.0 + cd petsc4py-3.11.0 + pushd petsc4py-openmpi + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1937358 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh load mpi/openmpi-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi + export PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/openmpi + PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/openmpi + /usr/bin/python2 setup.py test running test -------------------------------------------------------------------------- [[58110,1],0]: A high-performance Open MPI point-to-point messaging module was unable to find any relevant network interfaces: Module: OpenFabrics (openib) Host: buildhw-07 Another transport will be used instead, although this may result in lower performance. -------------------------------------------------------------------------- [0@buildhw-07.phx2.fedoraproject.org] Python 2.7 (/usr/bin/python2) [0@buildhw-07.phx2.fedoraproject.org] PETSc 3.11.3 release (conf: '') [0@buildhw-07.phx2.fedoraproject.org] petsc4py 3.11.0 (build/lib.linux-x86_64-2.7/petsc4py) ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ---------------------------------------------------------------------- Ran 4172 tests in 23.747s OK + MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi + export PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi + PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi + /usr/bin/python3 setup.py test running test -------------------------------------------------------------------------- [[58097,1],0]: A high-performance Open MPI point-to-point messaging module was unable to find any relevant network interfaces: Module: OpenFabrics (openib) Host: buildhw-07 Another transport will be used instead, although this may result in lower performance. -------------------------------------------------------------------------- [0@buildhw-07.phx2.fedoraproject.org] Python 3.6 (/usr/bin/python3) [0@buildhw-07.phx2.fedoraproject.org] PETSc 3.11.3 release (conf: '') [0@buildhw-07.phx2.fedoraproject.org] petsc4py 3.11.0 (build/lib.linux-x86_64-3.6/petsc4py) ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ---------------------------------------------------------------------- Ran 4172 tests in 25.499s OK + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1937358 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/openmpi-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/openmpi-x86_64 ++ /usr/bin/modulecmd sh unload mpi/openmpi-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset _LMFILES_ + popd ~/build/BUILD/petsc4py-3.11.0 ~/build/BUILD/petsc4py-3.11.0/petsc4py-mpich ~/build/BUILD/petsc4py-3.11.0 + pushd petsc4py-mpich + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1937358 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' '' = '' ']' +++ LOADEDMODULES= +++ export LOADEDMODULES +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module load mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh load mpi/mpich-x86_64 + eval LD_LIBRARY_PATH=/usr/lib64/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-x86_64' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich:/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-x86_64' ';export' '_LMFILES_;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man ++ export MANPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich-x86_64 ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/mpich ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ PYTHONPATH=/usr/lib64/python2.7/site-packages/mpich:/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/openmpi ++ export PYTHONPATH ++ _LMFILES_=/etc/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ + export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic' + MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/mpich + export PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/mpich + PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python2.7/site-packages/mpich + /usr/bin/python2 setup.py test running test [0@buildhw-07.phx2.fedoraproject.org] Python 2.7 (/usr/bin/python2) [0@buildhw-07.phx2.fedoraproject.org] PETSc 3.11.3 release (conf: '') [0@buildhw-07.phx2.fedoraproject.org] petsc4py 3.11.0 (build/lib.linux-x86_64-2.7/petsc4py) ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ---------------------------------------------------------------------- Ran 4172 tests in 21.370s OK + MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/mpich + export PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/mpich + PYTHONPATH=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/lib64/python3.6/site-packages/mpich + /usr/bin/python3 setup.py test running test [0@buildhw-07.phx2.fedoraproject.org] Python 3.6 (/usr/bin/python3) [0@buildhw-07.phx2.fedoraproject.org] PETSc 3.11.3 release (conf: '') [0@buildhw-07.phx2.fedoraproject.org] petsc4py 3.11.0 (build/lib.linux-x86_64-3.6/petsc4py) ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ---------------------------------------------------------------------- Ran 4172 tests in 27.382s OK + . /etc/profile.d/modules.sh ++++ /bin/ps -p 1937358 -ocomm= +++ /bin/basename sh ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ MODULESHOME=/usr/share/Modules +++ export MODULESHOME +++ '[' mpi/mpich-x86_64 = '' ']' +++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']' + module unload mpi/mpich-x86_64 ++ /usr/bin/modulecmd sh unload mpi/mpich-x86_64 + eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' '_LMFILES_;' ++ MANPATH=/usr/share/man:/usr/local/share/man ++ export MANPATH ++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset LD_LIBRARY_PATH ++ unset LOADEDMODULES ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ~/build/BUILD/petsc4py-3.11.0 Processing files: python2-petsc4py-openmpi-3.11.0-12.el7.x86_64 ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ unset _LMFILES_ + popd + exit 0 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.TE0IfE + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + DOCDIR=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python2-petsc4py-openmpi-3.11.0 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python2-petsc4py-openmpi-3.11.0 + cp -pr petsc4py-openmpi/CHANGES.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python2-petsc4py-openmpi-3.11.0 + cp -pr petsc4py-openmpi/README.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python2-petsc4py-openmpi-3.11.0 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.b1lW6n + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + LICENSEDIR=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python2-petsc4py-openmpi-3.11.0 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python2-petsc4py-openmpi-3.11.0 + cp -pr petsc4py-openmpi/LICENSE.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python2-petsc4py-openmpi-3.11.0 + exit 0 Provides: python-petsc4py-openmpi = 3.11.0-12.el7 python-petsc4py-openmpi(x86-64) = 3.11.0-12.el7 python2-petsc4py-openmpi = 3.11.0-12.el7 python2-petsc4py-openmpi(x86-64) = 3.11.0-12.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libmpi.so.12()(64bit) libpetsc.so.3.11()(64bit) libpthread.so.0()(64bit) libpython2.7.so.1.0()(64bit) python(abi) = 2.7 rtld(GNU_HASH) Obsoletes: python-petsc4py-openmpi < 3.11.0-12.el7 Processing files: petsc4py-openmpi-devel-3.11.0-12.el7.x86_64 Provides: petsc4py-openmpi-devel = 3.11.0-12.el7 petsc4py-openmpi-devel(x86-64) = 3.11.0-12.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python36-petsc4py-openmpi-3.11.0-12.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.eGZlC8 + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + DOCDIR=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python36-petsc4py-openmpi-3.11.0 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python36-petsc4py-openmpi-3.11.0 + cp -pr petsc4py-openmpi/CHANGES.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python36-petsc4py-openmpi-3.11.0 + cp -pr petsc4py-openmpi/README.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python36-petsc4py-openmpi-3.11.0 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.1Vrb9S + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + LICENSEDIR=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python36-petsc4py-openmpi-3.11.0 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python36-petsc4py-openmpi-3.11.0 + cp -pr petsc4py-openmpi/LICENSE.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python36-petsc4py-openmpi-3.11.0 + exit 0 Provides: python3-petsc4py-openmpi = 3.11.0-12.el7 python3-petsc4py-openmpi(x86-64) = 3.11.0-12.el7 python36-petsc4py-openmpi = 3.11.0-12.el7 python36-petsc4py-openmpi(x86-64) = 3.11.0-12.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libmpi.so.12()(64bit) libpetsc.so.3.11()(64bit) libpthread.so.0()(64bit) libpython3.6m.so.1.0()(64bit) python(abi) = 3.6 rtld(GNU_HASH) Processing files: python2-petsc4py-mpich-3.11.0-12.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.xwUUdE + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + DOCDIR=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python2-petsc4py-mpich-3.11.0 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python2-petsc4py-mpich-3.11.0 + cp -pr petsc4py-mpich/CHANGES.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python2-petsc4py-mpich-3.11.0 + cp -pr petsc4py-mpich/README.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python2-petsc4py-mpich-3.11.0 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.1aW2jp + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + LICENSEDIR=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python2-petsc4py-mpich-3.11.0 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python2-petsc4py-mpich-3.11.0 + cp -pr petsc4py-mpich/LICENSE.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python2-petsc4py-mpich-3.11.0 + exit 0 Provides: python-petsc4py-mpich = 3.11.0-12.el7 python-petsc4py-mpich(x86-64) = 3.11.0-12.el7 python2-petsc4py-mpich = 3.11.0-12.el7 python2-petsc4py-mpich(x86-64) = 3.11.0-12.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libmpich.so.10()(64bit) libmpl.so.1()(64bit) libopa.so.1()(64bit) libpetsc.so.3.11()(64bit) libpthread.so.0()(64bit) libpython2.7.so.1.0()(64bit) librt.so.1()(64bit) python(abi) = 2.7 rtld(GNU_HASH) Obsoletes: python-petsc4py-mpich < 3.11.0-12.el7 Processing files: petsc4py-mpich-devel-3.11.0-12.el7.x86_64 Provides: petsc4py-mpich-devel = 3.11.0-12.el7 petsc4py-mpich-devel(x86-64) = 3.11.0-12.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python36-petsc4py-mpich-3.11.0-12.el7.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.oFFc5a + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + DOCDIR=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python36-petsc4py-mpich-3.11.0 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python36-petsc4py-mpich-3.11.0 + cp -pr petsc4py-mpich/CHANGES.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python36-petsc4py-mpich-3.11.0 + cp -pr petsc4py-mpich/README.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/doc/python36-petsc4py-mpich-3.11.0 + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.tBJKRW + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + LICENSEDIR=/builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python36-petsc4py-mpich-3.11.0 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python36-petsc4py-mpich-3.11.0 + cp -pr petsc4py-mpich/LICENSE.rst /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64/usr/share/licenses/python36-petsc4py-mpich-3.11.0 + exit 0 Provides: python3-petsc4py-mpich = 3.11.0-12.el7 python3-petsc4py-mpich(x86-64) = 3.11.0-12.el7 python36-petsc4py-mpich = 3.11.0-12.el7 python36-petsc4py-mpich(x86-64) = 3.11.0-12.el7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libmpich.so.10()(64bit) libmpl.so.1()(64bit) libopa.so.1()(64bit) libpetsc.so.3.11()(64bit) libpthread.so.0()(64bit) libpython3.6m.so.1.0()(64bit) librt.so.1()(64bit) python(abi) = 3.6 rtld(GNU_HASH) Processing files: petsc4py-debuginfo-3.11.0-12.el7.x86_64 Provides: petsc4py-debuginfo = 3.11.0-12.el7 petsc4py-debuginfo(x86-64) = 3.11.0-12.el7 Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 Wrote: /builddir/build/RPMS/python2-petsc4py-openmpi-3.11.0-12.el7.x86_64.rpm Wrote: /builddir/build/RPMS/petsc4py-openmpi-devel-3.11.0-12.el7.x86_64.rpm Wrote: /builddir/build/RPMS/python36-petsc4py-openmpi-3.11.0-12.el7.x86_64.rpm Wrote: /builddir/build/RPMS/python2-petsc4py-mpich-3.11.0-12.el7.x86_64.rpm Wrote: /builddir/build/RPMS/petsc4py-mpich-devel-3.11.0-12.el7.x86_64.rpm Wrote: /builddir/build/RPMS/python36-petsc4py-mpich-3.11.0-12.el7.x86_64.rpm Wrote: /builddir/build/RPMS/petsc4py-debuginfo-3.11.0-12.el7.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.GiaJXN + umask 022 + cd /builddir/build/BUILD + cd petsc4py-3.11.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/petsc4py-3.11.0-12.el7.x86_64 + exit 0 Child return code was: 0