Mock Version: 1.1.21
Mock Version: 1.1.21
ENTER do(['bash', '--login', '-c', 'rpmbuild -bs --target x86_64 --nodeps builddir/build/SPECS/mpi4py.spec'], False, '/var/lib/mock/dist-6E-epel-build-1428612-231852/root/', None, 86400, True, False, 500, 425, None, False, {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n "<mock-chroot>"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'}, logger=<mockbuild.trace_decorator.getLog object at 0x12129d0>)
Executing command: ['bash', '--login', '-c', 'rpmbuild -bs --target x86_64 --nodeps builddir/build/SPECS/mpi4py.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n "<mock-chroot>"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'}
sh: line 0: fg: no job control
warning: Could not canonicalize hostname: buildvm-03.phx2.fedoraproject.org
Building target platforms: x86_64
Building for target x86_64
Wrote: /builddir/build/SRPMS/mpi4py-1.3-5.el6.src.rpm
Child return code was: 0
LEAVE do --> 

ENTER do(['bash', '--login', '-c', 'rpmbuild -bb --target x86_64 --nodeps builddir/build/SPECS/mpi4py.spec'], False, '/var/lib/mock/dist-6E-epel-build-1428612-231852/root/', None, 86400, True, False, 500, 425, None, False, {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n "<mock-chroot>"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'}, logger=<mockbuild.trace_decorator.getLog object at 0x12129d0>)
Executing command: ['bash', '--login', '-c', 'rpmbuild -bb --target x86_64 --nodeps builddir/build/SPECS/mpi4py.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n "<mock-chroot>"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'}
sh: line 0: fg: no job control
Building target platforms: x86_64
Building for target x86_64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.OM5v73
+ umask 022
+ cd /builddir/build/BUILD
+ LANG=C
+ export LANG
+ unset DISPLAY
+ cd /builddir/build/BUILD
+ rm -rf mpi4py-1.3
+ /usr/bin/gzip -dc /builddir/build/SOURCES/mpi4py-1.3.tar.gz
+ /bin/tar -xf -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd mpi4py-1.3
+ /bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ rm -r docs/source
++ find
++ grep runtests.bat
+ for file in '$(find | grep runtests.bat)'
+ sed -i 's/\r//' ./demo/init-fini/runtests.bat
+ for file in '$(find | grep runtests.bat)'
+ sed -i 's/\r//' ./demo/reductions/runtests.bat
+ for file in '$(find | grep runtests.bat)'
+ sed -i 's/\r//' ./demo/sequential/runtests.bat
+ for file in '$(find | grep runtests.bat)'
+ sed -i 's/\r//' ./demo/nxtval/runtests.bat
+ for file in '$(find | grep runtests.bat)'
+ sed -i 's/\r//' ./demo/mpi-ref-v1/runtests.bat
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.tJNGN3
+ umask 022
+ cd /builddir/build/BUILD
+ cd mpi4py-1.3
+ LANG=C
+ export LANG
+ unset DISPLAY
+ export CC=mpicc
+ CC=mpicc
+ export CXX=mpicxx
+ CXX=mpicxx
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 15157 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load openmpi-x86_64
++ /usr/bin/modulecmd sh load openmpi-x86_64
+ eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=openmpi-x86_64' ';export' 'LOADEDMODULES;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.6/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.6/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/openmpi-x86_64' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=openmpi-x86_64
++ export LOADEDMODULES
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.6/site-packages/openmpi
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin
++ export PATH
++ PYTHONPATH=/usr/lib64/python2.6/site-packages/openmpi
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/openmpi-x86_64
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ /usr/bin/python setup.py build
running build
running build_src
running build_py
creating build
creating build/lib.linux-x86_64-2.6
creating build/lib.linux-x86_64-2.6/mpi4py
copying src/rc.py -> build/lib.linux-x86_64-2.6/mpi4py
copying src/__init__.py -> build/lib.linux-x86_64-2.6/mpi4py
creating build/lib.linux-x86_64-2.6/mpi4py/include
creating build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi4py.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/MPI.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/__init__.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi_c.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/__init__.pyx -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi.pxi -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi4py.i -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
running build_clib
MPI configuration: [mpi] from 'mpi.cfg'
MPI C compiler:    /usr/lib64/openmpi/bin/mpicc
MPI C++ compiler:  /usr/lib64/openmpi/bin/mpicxx
MPI F77 compiler:  /usr/lib64/openmpi/bin/mpif77
MPI F90 compiler:  /usr/lib64/openmpi/bin/mpif90
checking for library 'mpe' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lmpe -o _configtest
/usr/bin/ld: cannot find -lmpe
collect2: ld returned 1 exit status
failure.
removing: _configtest.c _configtest.o
building 'mpe' dylib library
creating build/temp.linux-x86_64-2.6
creating build/temp.linux-x86_64-2.6/src
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c src/pmpi-mpe.c -o build/temp.linux-x86_64-2.6/src/pmpi-mpe.o
creating build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi
/usr/lib64/openmpi/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/pmpi-mpe.o -o build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libmpe.so
checking for library 'vt-mpi' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lvt-mpi -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'vt' dylib library
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c src/pmpi-vt.c -o build/temp.linux-x86_64-2.6/src/pmpi-vt.o
/usr/lib64/openmpi/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/pmpi-vt.o -o build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt.so -Wl,-whole-archive -lvt-mpi -Wl,-no-whole-archive -lotf -lz -ldl
/usr/bin/ld: cannot find -lz
collect2: ld returned 1 exit status
checking for library 'vt-mpi' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
warning: build_clib: building library "vt" failed
warning: build_clib: command '/usr/lib64/openmpi/bin/mpicc' failed with exit status 1
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lvt-mpi -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'vt-mpi' dylib library
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c src/pmpi-vt-mpi.c -o build/temp.linux-x86_64-2.6/src/pmpi-vt-mpi.o
/usr/lib64/openmpi/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/pmpi-vt-mpi.o -lvt-mpi -o build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt-mpi.so
checking for library 'vt-hyb' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lvt-hyb -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'vt-hyb' dylib library
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c src/pmpi-vt-hyb.c -o build/temp.linux-x86_64-2.6/src/pmpi-vt-hyb.o
/usr/lib64/openmpi/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/pmpi-vt-hyb.o -lvt-hyb -o build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt-hyb.so
running build_ext
MPI configuration: [mpi] from 'mpi.cfg'
MPI C compiler:    /usr/lib64/openmpi/bin/mpicc
MPI C++ compiler:  /usr/lib64/openmpi/bin/mpicxx
MPI F77 compiler:  /usr/lib64/openmpi/bin/mpif77
MPI F90 compiler:  /usr/lib64/openmpi/bin/mpif90
checking for MPI compile and link ...
checking for header 'mpi.h' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
success!
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for missing MPI functions/symbols ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
checking for function 'MPI_Type_create_f90_integer' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for function 'MPI_Type_create_f90_real' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for function 'MPI_Type_create_f90_complex' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'mpi4py.MPI' extension
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c src/MPI.c -o build/temp.linux-x86_64-2.6/src/MPI.o
/usr/lib64/openmpi/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/MPI.o -Lbuild/temp.linux-x86_64-2.6 -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/MPI.so
writing build/lib.linux-x86_64-2.6/mpi4py/mpi.cfg
checking for MPE availability ...
checking for library 'lmpe' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -llmpe -o _configtest
/usr/bin/ld: cannot find -llmpe
collect2: ld returned 1 exit status
failure.
removing: _configtest.c _configtest.o
checking for library 'mpe' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -lmpe -o _configtest
/usr/bin/ld: cannot find -lmpe
collect2: ld returned 1 exit status
failure.
removing: _configtest.c _configtest.o
checking for library 'pthread' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -lpthread -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for header 'mpe.h' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
_configtest.c:3:17: error: mpe.h: No such file or directory
failure.
removing: _configtest.c _configtest.o
failure.
building 'mpi4py.MPE' extension
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c src/MPE.c -o build/temp.linux-x86_64-2.6/src/MPE.o
/usr/lib64/openmpi/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/MPE.o -Lbuild/temp.linux-x86_64-2.6 -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/MPE.so
checking for dlopen() availability ...
checking for header 'dlfcn.h' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
success!
checking for library 'dl' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -ldl -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for function 'dlopen' ...
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -ldl -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'mpi4py.dl' extension
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -DHAVE_DLFCN_H=1 -DHAVE_DLOPEN=1 -I/usr/include/python2.6 -c src/dynload.c -o build/temp.linux-x86_64-2.6/src/dynload.o
/usr/lib64/openmpi/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/dynload.o -Lbuild/temp.linux-x86_64-2.6 -ldl -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/dl.so
running build_exe
MPI configuration: [mpi] from 'mpi.cfg'
MPI C compiler:    /usr/lib64/openmpi/bin/mpicc
MPI C++ compiler:  /usr/lib64/openmpi/bin/mpicxx
MPI F77 compiler:  /usr/lib64/openmpi/bin/mpif77
MPI F90 compiler:  /usr/lib64/openmpi/bin/mpif90
building 'python-mpi' executable
/usr/lib64/openmpi/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c src/python.c -o build/temp.linux-x86_64-2.6/src/python.o
creating build/lib.linux-x86_64-2.6/mpi4py/bin
/usr/lib64/openmpi/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -Wl,-export-dynamic build/temp.linux-x86_64-2.6/src/python.o -L/usr/lib64 -L/usr/lib64/python2.6/config -Lbuild/temp.linux-x86_64-2.6 -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/bin/python-mpi -L/usr/lib6464 -lpthread -ldl -lutil -lm
+ mv build openmpi
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 15157 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' openmpi-x86_64 = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module unload openmpi-x86_64
++ /usr/bin/modulecmd sh unload openmpi-x86_64
+ eval PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin
++ export PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 15157 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load mpich2-x86_64
++ /usr/bin/modulecmd sh load mpich2-x86_64
+ eval LOADEDMODULES=mpich2-x86_64 ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich2:/usr/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich2/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich2-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich2' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich2-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich2/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich2' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/mpich2/bin' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich2' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich2-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin' ';export' 'PATH;_LMFILES_=/usr/share/Modules/modulefiles/mpich2-x86_64' ';export' '_LMFILES_;'
++ LOADEDMODULES=mpich2-x86_64
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/mpich2:/usr/man
++ export MANPATH
++ MPI_BIN=/usr/lib64/mpich2/bin
++ export MPI_BIN
++ MPI_COMPILER=mpich2-x86_64
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-x86_64
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich2
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/mpich2-x86_64
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/mpich2/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/mpich2
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib64/mpich2/bin
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_mpich2
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/mpich2-x86_64
++ export MPI_SYSCONFIG
++ PATH=/usr/lib64/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin
++ export PATH
++ _LMFILES_=/usr/share/Modules/modulefiles/mpich2-x86_64
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ /usr/bin/python setup.py build
running build
running build_src
running build_py
creating build
creating build/lib.linux-x86_64-2.6
creating build/lib.linux-x86_64-2.6/mpi4py
copying src/rc.py -> build/lib.linux-x86_64-2.6/mpi4py
copying src/__init__.py -> build/lib.linux-x86_64-2.6/mpi4py
creating build/lib.linux-x86_64-2.6/mpi4py/include
creating build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi4py.h -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/MPI.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/__init__.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi_c.pxd -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/__init__.pyx -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi.pxi -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
copying src/include/mpi4py/mpi4py.i -> build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py
running build_clib
MPI configuration: [mpi] from 'mpi.cfg'
MPI C compiler:    /usr/lib64/mpich2/bin/mpicc
MPI C++ compiler:  /usr/lib64/mpich2/bin/mpicxx
MPI F77 compiler:  /usr/lib64/mpich2/bin/mpif77
MPI F90 compiler:  /usr/lib64/mpich2/bin/mpif90
checking for library 'mpe' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lmpe -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for library 'lmpe' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -llmpe -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for library 'pthread' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lpthread -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'mpe' dylib library
creating build/temp.linux-x86_64-2.6
creating build/temp.linux-x86_64-2.6/src
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c src/pmpi-mpe.c -o build/temp.linux-x86_64-2.6/src/pmpi-mpe.o
creating build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi
/usr/lib64/mpich2/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/pmpi-mpe.o -o build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libmpe.so -Wl,-whole-archive -llmpe -Wl,-no-whole-archive -lmpe -lpthread
checking for library 'vt-mpi' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lvt-mpi -o _configtest
/usr/bin/ld: cannot find -lvt-mpi
collect2: ld returned 1 exit status
failure.
removing: _configtest.c _configtest.o
checking for library 'vt.mpi' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lvt.mpi -o _configtest
/usr/bin/ld: cannot find -lvt.mpi
collect2: ld returned 1 exit status
failure.
removing: _configtest.c _configtest.o
building 'vt' dylib library
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c src/pmpi-vt.c -o build/temp.linux-x86_64-2.6/src/pmpi-vt.o
/usr/lib64/mpich2/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/pmpi-vt.o -o build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt.so
checking for library 'vt-mpi' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lvt-mpi -o _configtest
/usr/bin/ld: cannot find -lvt-mpi
collect2: ld returned 1 exit status
failure.
removing: _configtest.c _configtest.o
building 'vt-mpi' dylib library
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c src/pmpi-vt-mpi.c -o build/temp.linux-x86_64-2.6/src/pmpi-vt-mpi.o
/usr/lib64/mpich2/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/pmpi-vt-mpi.o -o build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt-mpi.so
checking for library 'vt-hyb' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -lvt-hyb -o _configtest
/usr/bin/ld: cannot find -lvt-hyb
collect2: ld returned 1 exit status
failure.
removing: _configtest.c _configtest.o
building 'vt-hyb' dylib library
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c src/pmpi-vt-hyb.c -o build/temp.linux-x86_64-2.6/src/pmpi-vt-hyb.o
/usr/lib64/mpich2/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/pmpi-vt-hyb.o -o build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt-hyb.so
running build_ext
MPI configuration: [mpi] from 'mpi.cfg'
MPI C compiler:    /usr/lib64/mpich2/bin/mpicc
MPI C++ compiler:  /usr/lib64/mpich2/bin/mpicxx
MPI F77 compiler:  /usr/lib64/mpich2/bin/mpif77
MPI F90 compiler:  /usr/lib64/mpich2/bin/mpif90
checking for MPI compile and link ...
checking for header 'mpi.h' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
success!
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for missing MPI functions/symbols ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
checking for function 'MPI_Type_create_f90_integer' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for function 'MPI_Type_create_f90_real' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for function 'MPI_Type_create_f90_complex' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'mpi4py.MPI' extension
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c src/MPI.c -o build/temp.linux-x86_64-2.6/src/MPI.o
/usr/lib64/mpich2/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/MPI.o -Lbuild/temp.linux-x86_64-2.6 -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/MPI.so
writing build/lib.linux-x86_64-2.6/mpi4py/mpi.cfg
checking for MPE availability ...
checking for library 'lmpe' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -llmpe -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for library 'mpe' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -lmpe -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for library 'pthread' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -lpthread -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for header 'mpe.h' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
success!
checking for function 'MPE_Init_log' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -llmpe -lmpe -lpthread -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'mpi4py.MPE' extension
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -DHAVE_MPE=1 -I/usr/include/python2.6 -c src/MPE.c -o build/temp.linux-x86_64-2.6/src/MPE.o
/usr/lib64/mpich2/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/MPE.o -Lbuild/temp.linux-x86_64-2.6 -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/MPE.so -Wl,-whole-archive -llmpe -Wl,-no-whole-archive -lmpe -lpthread
checking for dlopen() availability ...
checking for header 'dlfcn.h' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
success!
removing: _configtest.c _configtest.o
success!
checking for library 'dl' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -ldl -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
checking for function 'dlopen' ...
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c _configtest.c -o _configtest.o
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic _configtest.o -Lbuild/temp.linux-x86_64-2.6 -ldl -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building 'mpi4py.dl' extension
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -DHAVE_DLFCN_H=1 -DHAVE_DLOPEN=1 -I/usr/include/python2.6 -c src/dynload.c -o build/temp.linux-x86_64-2.6/src/dynload.o
/usr/lib64/mpich2/bin/mpicc -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic build/temp.linux-x86_64-2.6/src/dynload.o -Lbuild/temp.linux-x86_64-2.6 -ldl -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/dl.so
running build_exe
MPI configuration: [mpi] from 'mpi.cfg'
MPI C compiler:    /usr/lib64/mpich2/bin/mpicc
MPI C++ compiler:  /usr/lib64/mpich2/bin/mpicxx
MPI F77 compiler:  /usr/lib64/mpich2/bin/mpif77
MPI F90 compiler:  /usr/lib64/mpich2/bin/mpif90
building 'python-mpi' executable
/usr/lib64/mpich2/bin/mpicc -fPIC -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/include/python2.6 -c src/python.c -o build/temp.linux-x86_64-2.6/src/python.o
creating build/lib.linux-x86_64-2.6/mpi4py/bin
/usr/lib64/mpich2/bin/mpicc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -Wl,-export-dynamic build/temp.linux-x86_64-2.6/src/python.o -L/usr/lib64 -L/usr/lib64/python2.6/config -Lbuild/temp.linux-x86_64-2.6 -lpython2.6 -o build/lib.linux-x86_64-2.6/mpi4py/bin/python-mpi -L/usr/lib6464 -lpthread -ldl -lutil -lm
+ mv build mpich2
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 15157 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' mpich2-x86_64 = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module unload mpich2-x86_64
++ /usr/bin/modulecmd sh unload mpich2-x86_64
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.DffJvo
+ eval MANPATH=/usr/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin' ';export' 'PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' '_LMFILES_;'
++ MANPATH=/usr/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin
++ export PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset _LMFILES_
+ exit 0
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
++ dirname /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
+ cd mpi4py-1.3
+ LANG=C
+ export LANG
+ unset DISPLAY
+ rm -rf /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 16896 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load openmpi-x86_64
++ /usr/bin/modulecmd sh load openmpi-x86_64
+ eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=openmpi-x86_64' ';export' 'LOADEDMODULES;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-x86_64' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.6/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.6/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/openmpi-x86_64' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=openmpi-x86_64
++ export LOADEDMODULES
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.6/site-packages/openmpi
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin
++ export PATH
++ PYTHONPATH=/usr/lib64/python2.6/site-packages/openmpi
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/openmpi-x86_64
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ mv openmpi build
+ /usr/bin/python setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
running install
running install_lib
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/rc.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/bin
copying build/lib.linux-x86_64-2.6/mpi4py/bin/python-mpi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/bin
copying build/lib.linux-x86_64-2.6/mpi4py/dl.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/MPI.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi4py.i -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/__init__.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi4py.MPI.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi_c.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/__init__.pyx -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi.pxi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi4py.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/mpi.cfg -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/MPE.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/__init__.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/MPI.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
copying build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt-hyb.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
copying build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libmpe.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
copying build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt-mpi.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/rc.py to rc.pyc
byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/__init__.py to __init__.pyc
writing byte-compilation script '/tmp/tmp6GWvRJ.py'
/usr/bin/python -O /tmp/tmp6GWvRJ.py
removing /tmp/tmp6GWvRJ.py
running install_egg_info
Writing /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py-1.3-py2.6.egg-info
+ mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi
+ mv /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/ /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py-1.3-py2.6.egg-info /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi
+ mv build openmpi
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 16896 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' openmpi-x86_64 = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module unload openmpi-x86_64
++ /usr/bin/modulecmd sh unload openmpi-x86_64
+ eval PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin
++ export PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 16896 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load mpich2-x86_64
++ /usr/bin/modulecmd sh load mpich2-x86_64
+ eval LOADEDMODULES=mpich2-x86_64 ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich2:/usr/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/mpich2/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich2-x86_64' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-x86_64' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/mpich2' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich2-x86_64' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/mpich2/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich2' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/mpich2/bin' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich2' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich2-x86_64' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin' ';export' 'PATH;_LMFILES_=/usr/share/Modules/modulefiles/mpich2-x86_64' ';export' '_LMFILES_;'
++ LOADEDMODULES=mpich2-x86_64
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/mpich2:/usr/man
++ export MANPATH
++ MPI_BIN=/usr/lib64/mpich2/bin
++ export MPI_BIN
++ MPI_COMPILER=mpich2-x86_64
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/include/mpich2-x86_64
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich2
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/mpich2-x86_64
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/mpich2/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/mpich2
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib64/mpich2/bin
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_mpich2
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/mpich2-x86_64
++ export MPI_SYSCONFIG
++ PATH=/usr/lib64/mpich2/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin
++ export PATH
++ _LMFILES_=/usr/share/Modules/modulefiles/mpich2-x86_64
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic'
+ mv mpich2 build
+ /usr/bin/python setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
running install
running install_lib
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/rc.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/bin
copying build/lib.linux-x86_64-2.6/mpi4py/bin/python-mpi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/bin
copying build/lib.linux-x86_64-2.6/mpi4py/dl.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/MPI.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi4py.i -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/__init__.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi4py.MPI.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi_c.pxd -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/__init__.pyx -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi.pxi -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/include/mpi4py/mpi4py.h -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/include/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/mpi.cfg -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/MPE.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/__init__.py -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
copying build/lib.linux-x86_64-2.6/mpi4py/MPI.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py
creating /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
copying build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt-hyb.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
copying build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libmpe.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
copying build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt-mpi.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
copying build/lib.linux-x86_64-2.6/mpi4py/lib-pmpi/libvt.so -> /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/lib-pmpi
byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/rc.py to rc.pyc
byte-compiling /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/__init__.py to __init__.pyc
writing byte-compilation script '/tmp/tmp2b3pml.py'
/usr/bin/python -O /tmp/tmp2b3pml.py
removing /tmp/tmp2b3pml.py
running install_egg_info
Writing /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py-1.3-py2.6.egg-info
+ mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2
+ mv /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py/ /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpi4py-1.3-py2.6.egg-info /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2
+ mv build mpich2
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 16896 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' mpich2-x86_64 = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module unload mpich2-x86_64
++ /usr/bin/modulecmd sh unload mpich2-x86_64
+ eval MANPATH=/usr/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin' ';export' 'PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' '_LMFILES_;'
++ MANPATH=/usr/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/bin
++ export PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset _LMFILES_
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id /builddir/build/BUILD/mpi4py-1.3
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi/mpi4py/bin/python-mpi
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi/mpi4py/dl.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi/mpi4py/MPE.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi/mpi4py/MPI.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi/mpi4py/lib-pmpi/libvt-hyb.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi/mpi4py/lib-pmpi/libmpe.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/openmpi/mpi4py/lib-pmpi/libvt-mpi.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2/mpi4py/bin/python-mpi
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2/mpi4py/dl.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2/mpi4py/MPE.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2/mpi4py/MPI.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2/mpi4py/lib-pmpi/libvt-hyb.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2/mpi4py/lib-pmpi/libmpe.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2/mpi4py/lib-pmpi/libvt-mpi.so
extracting debug info from /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/site-packages/mpich2/mpi4py/lib-pmpi/libvt.so
9602 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump
+ /usr/lib/rpm/brp-python-bytecompile
Bytecompiling .py files below /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/lib64/python2.6/ using /usr/bin/python2.6
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.xURNiW
+ umask 022
+ cd /builddir/build/BUILD
+ cd mpi4py-1.3
+ unset DISPLAY
+ exit 0
Processing files: mpi4py-docs-1.3-5.el6.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.ucmw2t
+ umask 022
+ cd /builddir/build/BUILD
+ cd mpi4py-1.3
+ DOCDIR=/builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/share/doc/mpi4py-docs-1.3
+ export DOCDIR
+ rm -rf /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/share/doc/mpi4py-docs-1.3
+ /bin/mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/share/doc/mpi4py-docs-1.3
+ cp -pr docs/HISTORY.html docs/LICENSE.html docs/THANKS.html docs/apiref docs/index.html docs/mpi4py.pdf docs/usrman demo /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/share/doc/mpi4py-docs-1.3
+ exit 0
Finding  Provides: /bin/sh -c " /bin/grep -v  '/usr/lib64/python2.6/site-packages.*\.so$' | /bin/grep -v  '%{python3_sitearch}.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u "
Finding  Requires: /bin/sh -c " /bin/grep -v  '/usr/lib64/python2.6/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /bin/grep -v  '%{python3_sitearch}/openmpi/mpi4py/lib-pmpi/lib.*\.so' |  while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u "
Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Requires: /bin/sh
Processing files: mpi4py-common-1.3-5.el6.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.BRHQll
+ umask 022
+ cd /builddir/build/BUILD
+ cd mpi4py-1.3
+ DOCDIR=/builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/share/doc/mpi4py-common-1.3
+ export DOCDIR
+ rm -rf /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/share/doc/mpi4py-common-1.3
+ /bin/mkdir -p /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/share/doc/mpi4py-common-1.3
+ cp -pr HISTORY.txt LICENSE.txt /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64/usr/share/doc/mpi4py-common-1.3
+ exit 0
Finding  Provides: /bin/sh -c " /bin/grep -v  '/usr/lib64/python2.6/site-packages.*\.so$' | /bin/grep -v  '%{python3_sitearch}.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u "
Finding  Requires: /bin/sh -c " /bin/grep -v  '/usr/lib64/python2.6/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /bin/grep -v  '%{python3_sitearch}/openmpi/mpi4py/lib-pmpi/lib.*\.so' |  while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u "
Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Processing files: mpi4py-openmpi-1.3-5.el6.x86_64
Finding  Provides: /bin/sh -c " /bin/grep -v  '/usr/lib64/python2.6/site-packages.*\.so$' | /bin/grep -v  '%{python3_sitearch}.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u "
Finding  Requires: /bin/sh -c " /bin/grep -v  '/usr/lib64/python2.6/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /bin/grep -v  '%{python3_sitearch}/openmpi/mpi4py/lib-pmpi/lib.*\.so' |  while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u "
Provides: python2-mpi4py-openmpi = 1.3-5.el6 mpi4py-runtime = 1.3-5.el6
Requires(rpmlib): rpmlib(VersionedDependencies) <= 3.0.3-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libmpi.so.1()(64bit) libm.so.6()(64bit) libpthread.so.0()(64bit) libpython2.6.so.1.0()(64bit) libutil.so.1()(64bit) python(abi) = 2.6 rtld(GNU_HASH)
Processing files: mpi4py-mpich2-1.3-5.el6.x86_64
Finding  Provides: /bin/sh -c " /bin/grep -v  '/usr/lib64/python2.6/site-packages.*\.so$' | /bin/grep -v  '%{python3_sitearch}.*\.so$' | while read FILE; do /usr/lib/rpm/rpmdeps -P ${FILE}; done | /bin/sort -u "
Finding  Requires: /bin/sh -c " /bin/grep -v  '/usr/lib64/python2.6/site-packages/openmpi/mpi4py/lib-pmpi/lib.*\.so' | /bin/grep -v  '%{python3_sitearch}/openmpi/mpi4py/lib-pmpi/lib.*\.so' |  while read FILE; do /usr/lib/rpm/rpmdeps -R ${FILE}; done | /bin/sort -u "
Provides: python2-mpi4py-mpich2 = 1.3-5.el6 mpi4py-runtime = 1.3-5.el6
Requires(rpmlib): rpmlib(VersionedDependencies) <= 3.0.3-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libmpich.so.1.2()(64bit) libm.so.6()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libpython2.6.so.1.0()(64bit) librt.so.1()(64bit) libutil.so.1()(64bit) python(abi) = 2.6 rtld(GNU_HASH)
Processing files: mpi4py-debuginfo-1.3-5.el6.x86_64
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
warning: Could not canonicalize hostname: buildvm-03.phx2.fedoraproject.org
Wrote: /builddir/build/RPMS/mpi4py-docs-1.3-5.el6.noarch.rpm
Wrote: /builddir/build/RPMS/mpi4py-common-1.3-5.el6.noarch.rpm
Wrote: /builddir/build/RPMS/mpi4py-openmpi-1.3-5.el6.x86_64.rpm
Wrote: /builddir/build/RPMS/mpi4py-mpich2-1.3-5.el6.x86_64.rpm
Wrote: /builddir/build/RPMS/mpi4py-debuginfo-1.3-5.el6.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.HhsZwF
+ umask 022
+ cd /builddir/build/BUILD
+ cd mpi4py-1.3
+ rm -rf /builddir/build/BUILDROOT/mpi4py-1.3-5.el6.x86_64
+ exit 0
Child return code was: 0
LEAVE do -->