Mock Version: 2.1 Mock Version: 2.1 Mock Version: 2.1 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target noarch --nodeps /builddir/build/SPECS/R-rex.spec'], chrootPath='/var/lib/mock/f30-build-20837571-1535339/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target noarch --nodeps /builddir/build/SPECS/R-rex.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: noarch Building for target noarch Wrote: /builddir/build/SRPMS/R-rex-1.2.0-1.fc30.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target noarch --nodeps /builddir/build/SPECS/R-rex.spec'], chrootPath='/var/lib/mock/f30-build-20837571-1535339/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target noarch --nodeps /builddir/build/SPECS/R-rex.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: noarch Building for target noarch Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.glWEtB + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf rex + /usr/bin/mkdir -p rex + cd rex + /usr/bin/gzip -dc /builddir/build/SOURCES/rex_1.2.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i 's/, covr//g' rex/DESCRIPTION + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.EvFsY1 + umask 022 + cd /builddir/build/BUILD + cd rex + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.oZsYJv + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch ++ dirname /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch + cd rex + mkdir -p /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch/usr/share/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch/usr/share/R/library rex * installing *source* package 'rex' ... file 'DESCRIPTION' has the wrong MD5 checksum ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'rex' finding HTML links ... done as.regex html capture html character_class html character_class_escape html counts html escape html group html lookarounds html not html or html re_matches html re_substitutes html regex html register_shortcuts html rex html rex_mode html shortcuts html single_shortcuts html wildcards html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rex) + test -d rex/src + rm -f /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch/usr/share/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j5 --strict-build-id -m -i --build-id-seed 1.2.0-1.fc30 --unique-debug-suffix -1.2.0-1.fc30.noarch --unique-debug-src-base R-rex-1.2.0-1.fc30.noarch --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/rex + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.gdTK1T + umask 022 + cd /builddir/build/BUILD + cd rex + _R_CHECK_FORCE_SUGGESTS_=0 + /usr/bin/R CMD check rex * using log directory '/builddir/build/BUILD/rex/rex.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: armv7hl-redhat-linux-gnu (32-bit) * using session charset: ASCII * checking for file 'rex/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'rex' version '1.2.0' * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.10/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.10/bioc/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.10/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.10/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.10/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.10/data/experiment/src/contrib/PACKAGES' NOTE Packages suggested but not available for checking: 'dplyr', 'ggplot2', 'Hmisc', 'rvest', 'roxygen2' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'rex' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... 'log_parsing.Rmd'using 'UTF-8'... OK 'url_parsing.Rmd'using 'UTF-8'... OK NONE * checking re-building of vignette outputs ... WARNING Error(s) in re-building vignettes: --- re-building 'log_parsing.Rmd' using rmarkdown Quitting from lines 29-34 (log_parsing.Rmd) Error: processing vignette 'log_parsing.Rmd' failed with diagnostics: there is no package called 'dplyr' --- failed re-building 'log_parsing.Rmd' --- re-building 'url_parsing.Rmd' using rmarkdown Error running filter /usr/share/R/library/rmarkdown/rmd/lua/pagebreak.lua: Couldn't load 'init.lua'. [string "-- This Lua script is run every time the Lua interpreter is started when running..."]:5: module 'pandoc' not found: no field package.preload['pandoc'] no file '/usr/share/lua/5.3/pandoc.lua' no file '/usr/share/lua/5.3/pandoc/init.lua' no file '/usr/lib/lua/5.3/pandoc.lua' no file '/usr/lib/lua/5.3/pandoc/init.lua' no file './pandoc.lua' no file './pandoc/init.lua' no file '/usr/lib/lua/5.3/pandoc.so' no file '/usr/lib/lua/5.3/loadall.so' no file './pandoc.so' Error: processing vignette 'url_parsing.Rmd' failed with diagnostics: pandoc document conversion failed with error 83 --- failed re-building 'url_parsing.Rmd' SUMMARY: processing the following files failed: 'log_parsing.Rmd' 'url_parsing.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * DONE Status: 1 WARNING, 1 NOTE See '/builddir/build/BUILD/rex/rex.Rcheck/00check.log' for details. + exit 0 Processing files: R-rex-1.2.0-1.fc30.noarch Provides: R-rex = 1.2.0-1.fc30 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Suggests: R-roxygen2 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch Wrote: /builddir/build/RPMS/R-rex-1.2.0-1.fc30.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.GLGIFm + umask 022 + cd /builddir/build/BUILD + cd rex + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-rex-1.2.0-1.fc30.noarch + exit 0 Child return code was: 0