Mock Version: 2.3
Mock Version: 2.3
Mock Version: 2.3
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target noarch --nodeps /builddir/build/SPECS/R-gplots.spec'], chrootPath='/var/lib/mock/f31-build-21756060-1780675/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3ff8fb49fa0>timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target noarch --nodeps /builddir/build/SPECS/R-gplots.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
Building target platforms: noarch
Building for target noarch
setting SOURCE_DATE_EPOCH=1595289600
Wrote: /builddir/build/SRPMS/R-gplots-3.0.4-1.fc31.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target noarch --nodeps /builddir/build/SPECS/R-gplots.spec'], chrootPath='/var/lib/mock/f31-build-21756060-1780675/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3ff8fb49fa0>timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target noarch --nodeps /builddir/build/SPECS/R-gplots.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
Building target platforms: noarch
Building for target noarch
setting SOURCE_DATE_EPOCH=1595289600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.n4l2pY
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf gplots
+ /usr/bin/mkdir -p gplots
+ cd gplots
+ /usr/bin/gzip -dc /builddir/build/SOURCES/gplots_3.0.4.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ for file in gplots/inst/doc/venn.Rnw
+ sed 's|\r||g' gplots/inst/doc/venn.Rnw
+ touch -r gplots/inst/doc/venn.Rnw gplots/inst/doc/venn.Rnw.new
+ mv gplots/inst/doc/venn.Rnw.new gplots/inst/doc/venn.Rnw
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.PNmuh1
+ umask 022
+ cd /builddir/build/BUILD
+ cd gplots
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.yR8bnY
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch
++ dirname /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch
+ cd gplots
+ mkdir -p /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch/usr/share/R/library
+ /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch/usr/share/R/library gplots
* installing *source* package 'gplots' ...
** package 'gplots' successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gplots'
    finding HTML links ... done
    angleAxis                               html  
    balloonplot                             html  
    bandplot                                html  
    barplot2                                html  
    boxplot2                                html  
    ci2d                                    html  
    col2hex                                 html  
    colorpanel                              html  
    gplots-defunct                          html  
    gplots-deprecated                       html  
    heatmap.2                               html  
    hist2d                                  html  
    lmplot2                                 html  
    lowess                                  html  
    ooplot                                  html  
    overplot                                html  
    plotCI                                  html  
    plotmeans                               html  
    qqnorm.aov                              html  
    residplot                               html  
    rich.colors                             html  
    rtPCR                                   html  
    sinkplot                                html  
    space                                   html  
    textplot                                html  
    venn                                    html  
    wapply                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (gplots)
+ test -d gplots/src
+ rm -f /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch/usr/share/R/library/R.css
+ /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 3.0.4-1.fc31 --unique-debug-suffix -3.0.4-1.fc31.noarch --unique-debug-src-base R-gplots-3.0.4-1.fc31.noarch --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/gplots
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.O3oG1Y
+ umask 022
+ cd /builddir/build/BUILD
+ cd gplots
+ /usr/bin/R CMD check gplots
* using log directory '/builddir/build/BUILD/gplots/gplots.Rcheck'
* using R version 3.6.3 (2020-02-29)
* using platform: s390x-ibm-linux-gnu (64-bit)
* using session charset: ASCII
* checking for file 'gplots/DESCRIPTION' ... OK
* this is package 'gplots' version '3.0.4'
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
  cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.10/bioc/src/contrib:
  cannot open URL 'https://bioconductor.org/packages/3.10/bioc/src/contrib/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.10/data/annotation/src/contrib:
  cannot open URL 'https://bioconductor.org/packages/3.10/data/annotation/src/contrib/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.10/data/experiment/src/contrib:
  cannot open URL 'https://bioconductor.org/packages/3.10/data/experiment/src/contrib/PACKAGES'
 OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'gplots' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... WARNING
Error: package or namespace load failed for 'gplots' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
 there is no package called 'gdata'
Execution halted
It looks like this package has a loading problem when not on .libPaths:
see the messages for details.
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Unknown package 'r2d2' in Rd xrefs
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'heatmap2Test.R'
  Comparing 'heatmap2Test.Rout' to 'heatmap2Test.Rout.save' ... OK
  Running 'heatmap_to_heatmap.2_test.R'
  Running 'plotmeans_nobars.R'
  Running 'test_plottingDeepDendrogram.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ...
  'venn.Rnw'... OK
 OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE
See
  '/builddir/build/BUILD/gplots/gplots.Rcheck/00check.log'
for details.
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: R-gplots-3.0.4-1.fc31.noarch
Provides: R(gplots) = 3.0.4 R-gplots = 3.0.4-1.fc31
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: R(KernSmooth) R(caTools) R(gdata) R(gtools) R(stats) R-core >= 3.0
Suggests: R(MASS) R(grid) R(knitr)
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch
Wrote: /builddir/build/RPMS/R-gplots-3.0.4-1.fc31.noarch.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.x0fI0Z
+ umask 022
+ cd /builddir/build/BUILD
+ cd gplots
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-gplots-3.0.4-1.fc31.noarch
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0