Mock Version: 2.4
Mock Version: 2.4
Mock Version: 2.4
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/R-covr.spec'], chrootPath='/var/lib/mock/f32-build-22826199-2094727/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fc85199ebb0>timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target i686 --nodeps /builddir/build/SPECS/R-covr.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
Building target platforms: i686
Building for target i686
setting SOURCE_DATE_EPOCH=1600214400
Wrote: /builddir/build/SRPMS/R-covr-3.5.1-1.fc32.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/R-covr.spec'], chrootPath='/var/lib/mock/f32-build-22826199-2094727/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fc85199ebb0>timeout=201600uid=1000gid=425user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target i686 --nodeps /builddir/build/SPECS/R-covr.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
Building target platforms: i686
Building for target i686
setting SOURCE_DATE_EPOCH=1600214400
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.F328A3
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf covr
+ /usr/bin/mkdir -p covr
+ cd covr
+ /usr/bin/gzip -dc /builddir/build/SOURCES/covr_3.5.1.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.JC6cn4
+ umask 022
+ cd /builddir/build/BUILD
+ cd covr
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.3eQIK5
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386
++ dirname /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386
+ cd covr
+ mkdir -p /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386/usr/lib/R/library
+ /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386/usr/lib/R/library covr
* installing *source* package 'covr' ...
** package 'covr' successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m32 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include   -fpic  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection  -c reassign.c -o reassign.o
gcc -m32 -shared -L/usr/lib/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o covr.so reassign.o -L/usr/lib/R/lib -lR
installing to /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386/usr/lib/R/library/00LOCK-covr/00new/covr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'covr'
    finding HTML links ... done
    azure                                   html  
    clear_counters                          html  
    code_coverage                           html  
    codecov                                 html  
    count                                   html  
    coverage_to_list                        html  
    coveralls                               html  
    covr-package                            html  
    display_name                            html  
    environment_coverage                    html  
    exclusions                              html  
    file_coverage                           html  
    file_report                             html  
    function_coverage                       html  
    gitlab                                  html  
    in_covr                                 html  
    key                                     html  
    new_counter                             html  
Rd warning: /builddir/build/BUILD/covr/covr/man/new_counter.Rd:10: file link 'srcref' in package 'base' does not exist and so has been treated as a topic
    package_coverage                        html  
    percent_coverage                        html  
    print.coverage                          html  
    report                                  html  
    system_check                            html  
    system_output                           html  
    tally_coverage                          html  
    to_cobertura                            html  
    to_sonarqube                            html  
    trace_calls                             html  
    value                                   html  
    zero_coverage                           html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (covr)
+ test -d covr/src
+ cd covr/src
+ rm -f reassign.o covr.so
+ rm -f /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386/usr/lib/R/library/R.css
+ /usr/lib/rpm/find-debuginfo.sh -j6 --strict-build-id -m -i --build-id-seed 3.5.1-1.fc32 --unique-debug-suffix -3.5.1-1.fc32.i386 --unique-debug-src-base R-covr-3.5.1-1.fc32.i386 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/covr
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386/usr/lib/R/library/covr/libs/covr.so
extracting debug info from /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386/usr/lib/R/library/covr/libs/covr.so
original debug info size: 20kB, size after compression: 20kB
/usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
3 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.dxc511
+ umask 022
+ cd /builddir/build/BUILD
+ cd covr
+ /usr/bin/R CMD check covr
* using log directory '/builddir/build/BUILD/covr/covr.Rcheck'
* using R version 4.0.2 (2020-06-22)
* using platform: i686-redhat-linux-gnu (32-bit)
* using session charset: ASCII
* checking for file 'covr/DESCRIPTION' ... OK
* this is package 'covr' version '3.5.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
  cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.11/bioc/src/contrib:
  cannot open URL 'https://bioconductor.org/packages/3.11/bioc/src/contrib/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/annotation/src/contrib:
  cannot open URL 'https://bioconductor.org/packages/3.11/data/annotation/src/contrib/PACKAGES'
Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/experiment/src/contrib:
  cannot open URL 'https://bioconductor.org/packages/3.11/data/experiment/src/contrib/PACKAGES'
 OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'covr' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... WARNING
Warning in Sys.setlocale("LC_CTYPE", "en_US.UTF-8") :
  OS reports request to set locale to "en_US.UTF-8" cannot be honored
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... WARNING
Error: package or namespace load failed for 'covr':
 .onLoad failed in loadNamespace() for 'covr', details:
  call: loadNamespace(name)
  error: there is no package called 'rex'
Execution halted
It looks like this package has a loading problem when not on .libPaths:
see the messages for details.
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... WARNING
checking a package with encoding  'UTF-8'  in an ASCII locale
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ...
  'how_it_works.Rmd' using 'UTF-8'... OK
 NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 3 WARNINGs
See
  '/builddir/build/BUILD/covr/covr.Rcheck/00check.log'
for details.
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: R-covr-3.5.1-1.fc32.i686
Provides: R(covr) = 3.5.1 R-covr = 3.5.1-1.fc32 R-covr(x86-32) = 3.5.1-1.fc32 bundled(js-highlight) = 6.2 bundled(xstatic-bootstrap-common) = 3.3.5
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: R(ABI) = 4.0 R(crayon) R(digest) R(httr) R(jsonlite) R(methods) R(rex) R(stats) R(utils) R(withr) >= 1.0.2 R(yaml) R-core >= 3.1.0 libR.so rtld(GNU_HASH)
Suggests: R(DT) >= 0.2 R(R6) R(curl) R(htmltools) R(knitr) R(memoise) R(mockery) R(parallel) R(rlang) R(rmarkdown) R(rstudioapi) >= 0.2 R(testthat) R(xml2) >= 1.0.0
Processing files: R-covr-debugsource-3.5.1-1.fc32.i686
Provides: R-covr-debugsource = 3.5.1-1.fc32 R-covr-debugsource(x86-32) = 3.5.1-1.fc32
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-covr-debuginfo-3.5.1-1.fc32.i686
Provides: R-covr-debuginfo = 3.5.1-1.fc32 R-covr-debuginfo(x86-32) = 3.5.1-1.fc32 debuginfo(build-id) = 99337d84067984ce38d1963a10a629a6be98c41d
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: R-covr-debugsource(x86-32) = 3.5.1-1.fc32
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386
Wrote: /builddir/build/RPMS/R-covr-debugsource-3.5.1-1.fc32.i686.rpm
Wrote: /builddir/build/RPMS/R-covr-debuginfo-3.5.1-1.fc32.i686.rpm
Wrote: /builddir/build/RPMS/R-covr-3.5.1-1.fc32.i686.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.grAn34
+ umask 022
+ cd /builddir/build/BUILD
+ cd covr
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-covr-3.5.1-1.fc32.i386
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0